RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
COMMD2-201ENST00000463077 VAMP8Q9BV40 100 aa12.39□□□□□ -0.43
COMMD2-201ENST00000463077 DDTP30046 118 aa12.38□□□□□ -0.43
COMMD2-201ENST00000463077 SPRR1AP35321 89 aa12.38□□□□□ -0.43
COMMD2-201ENST00000463077 RPL28P46779 137 aaKnown RBP12.38□□□□□ -0.43
COMMD2-201ENST00000463077 MUSTN1Q8IVN3 82 aa12.37□□□□□ -0.43
COMMD2-201ENST00000463077 COPS9Q8WXC6 57 aa12.37□□□□□ -0.43
COMMD2-201ENST00000463077 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
COMMD2-201ENST00000463077 C14orf144Q96I85 54 aa12.35□□□□□ -0.43
COMMD2-201ENST00000463077 UBE2AP49459 152 aa12.34□□□□□ -0.43
COMMD2-201ENST00000463077 S100A7L2Q5SY68 101 aa12.34□□□□□ -0.43
COMMD2-201ENST00000463077 LINC00518Q8N0U6 118 aa12.34□□□□□ -0.43
COMMD2-201ENST00000463077 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
COMMD2-201ENST00000463077 FAM19A1Q7Z5A9 133 aa12.33□□□□□ -0.44
COMMD2-201ENST00000463077 PRLHP81277 87 aa12.32□□□□□ -0.44
COMMD2-201ENST00000463077 KRTAP1-4P0C5Y4 121 aa12.31□□□□□ -0.44
COMMD2-201ENST00000463077 S100A12P80511 92 aa12.31□□□□□ -0.44
COMMD2-201ENST00000463077 PRR26Q8N8Z3 221 aa12.3□□□□□ -0.44
COMMD2-201ENST00000463077 SLC25A34Q6PIV7 304 aa12.29□□□□□ -0.44
COMMD2-201ENST00000463077 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
COMMD2-201ENST00000463077 TRAV23DV6A0A075B6W5 121 aa12.28□□□□□ -0.44
COMMD2-201ENST00000463077 B5MCH6 92 aa12.27□□□□□ -0.45
COMMD2-201ENST00000463077 C2orf91Q6ZV80 131 aa12.27□□□□□ -0.45
COMMD2-201ENST00000463077 CBY1Q9Y3M2 126 aa12.27□□□□□ -0.45
COMMD2-201ENST00000463077 ETDCA0A1B0GVM5 59 aa12.26□□□□□ -0.45
COMMD2-201ENST00000463077 OR13C6PQ8NH95 151 aa12.26□□□□□ -0.45
COMMD2-201ENST00000463077 ZNF73O43830 326 aaPredicted RBP12.25□□□□□ -0.45
COMMD2-201ENST00000463077 HIST1H4GQ99525 98 aa12.24□□□□□ -0.45
COMMD2-201ENST00000463077 A4D1N5 150 aa12.23□□□□□ -0.45
COMMD2-201ENST00000463077 A0A0U1RQV1 116 aa12.22□□□□□ -0.45
COMMD2-201ENST00000463077 LCE2AQ5TA79 106 aaPredicted RBP12.21□□□□□ -0.45
COMMD2-201ENST00000463077 Q6ZRX8 168 aa12.21□□□□□ -0.45
COMMD2-201ENST00000463077 SMCR5Q8TEV8 140 aa12.21□□□□□ -0.45
COMMD2-201ENST00000463077 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.45
COMMD2-201ENST00000463077 TRAV13-2A0A0B4J235 113 aa12.2□□□□□ -0.46
COMMD2-201ENST00000463077 A6NDN8 102 aa12.2□□□□□ -0.46
COMMD2-201ENST00000463077 FAT4Q6V0I7 4981 aa12.2□□□□□ -0.46
COMMD2-201ENST00000463077 Q9BRP9 147 aa12.19□□□□□ -0.46
COMMD2-201ENST00000463077 TAL2Q16559 108 aa12.18□□□□□ -0.46
COMMD2-201ENST00000463077 LCE2BO14633 110 aa12.17□□□□□ -0.46
COMMD2-201ENST00000463077 PRR4Q16378 134 aa12.17□□□□□ -0.46
COMMD2-201ENST00000463077 KRTAP9-6A0A140TA67 174 aa12.16□□□□□ -0.46
COMMD2-201ENST00000463077 LOC105371267A0A1B0GV96 52 aa12.16□□□□□ -0.46
COMMD2-201ENST00000463077 TRBV7-6A0A0J9YX20 115 aa12.15□□□□□ -0.46
COMMD2-201ENST00000463077 ERC2-IT1O76042 136 aa12.15□□□□□ -0.46
COMMD2-201ENST00000463077 HINT1P49773 126 aaPredicted RBP12.15□□□□□ -0.46
COMMD2-201ENST00000463077 C6orf99Q4VX62 202 aa12.15□□□□□ -0.46
COMMD2-201ENST00000463077 ANAPC11Q9NYG5 84 aa12.15□□□□□ -0.46
COMMD2-201ENST00000463077 FAM229BQ4G0N7 80 aa12.14□□□□□ -0.47
COMMD2-201ENST00000463077 SPRR4Q96PI1 79 aa12.14□□□□□ -0.47
COMMD2-201ENST00000463077 A0A087X002 238 aa12.13□□□□□ -0.47
COMMD2-201ENST00000463077 SMIM6P0DI80 62 aa12.13□□□□□ -0.47
COMMD2-201ENST00000463077 ELOF1P60002 83 aaKnown RBP12.13□□□□□ -0.47
COMMD2-201ENST00000463077 SMIM11BQ8TCY0 68 aa12.13□□□□□ -0.47
COMMD2-201ENST00000463077 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
COMMD2-201ENST00000463077 RPL13AP40429 203 aaKnown RBP12.12□□□□□ -0.47
COMMD2-201ENST00000463077 CEND1Q8N111 149 aa12.12□□□□□ -0.47
COMMD2-201ENST00000463077 COX7BP24311 80 aa12.11□□□□□ -0.47
COMMD2-201ENST00000463077 C12orf57Q99622 126 aa12.11□□□□□ -0.47
COMMD2-201ENST00000463077 ZNF706Q9Y5V0 76 aaPredicted RBP12.11□□□□□ -0.47
COMMD2-201ENST00000463077 CFC1BP0CG36 223 aa12.1□□□□□ -0.47
COMMD2-201ENST00000463077 CFC1P0CG37 223 aa12.1□□□□□ -0.47
COMMD2-201ENST00000463077 CRYGAP11844 174 aa12.1□□□□□ -0.47
COMMD2-201ENST00000463077 KRTAP13-2Q52LG2 175 aa12.08□□□□□ -0.48
COMMD2-201ENST00000463077 LINC00483Q53H64 154 aa12.08□□□□□ -0.48
COMMD2-201ENST00000463077 DHRS4-AS1Q9P1J3 65 aa12.08□□□□□ -0.48
COMMD2-201ENST00000463077 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
COMMD2-201ENST00000463077 A0A1B0GWB2 263 aa12.07□□□□□ -0.48
COMMD2-201ENST00000463077 HSD52Q0P140 79 aa12.07□□□□□ -0.48
COMMD2-201ENST00000463077 FXYD2P54710 66 aa12.05□□□□□ -0.48
COMMD2-201ENST00000463077 TMEM238LA0A1B0GVL6 79 aa12.03□□□□□ -0.48
COMMD2-201ENST00000463077 A6NJY4 79 aa12.03□□□□□ -0.48
COMMD2-201ENST00000463077 PRO1933Q9H354 126 aa12.03□□□□□ -0.48
COMMD2-201ENST00000463077 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
COMMD2-201ENST00000463077 ST20-AS1Q8NBB2 130 aa12.02□□□□□ -0.49
COMMD2-201ENST00000463077 TYMSOSQ8TAI1 123 aa12.02□□□□□ -0.49
COMMD2-201ENST00000463077 RAB37Q96AX2 223 aa12.02□□□□□ -0.49
COMMD2-201ENST00000463077 VAMP3Q15836 100 aa12□□□□□ -0.49
COMMD2-201ENST00000463077 SPRR1BP22528 89 aa11.98□□□□□ -0.49
COMMD2-201ENST00000463077 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
COMMD2-201ENST00000463077 PRO1854Q9UHT4 67 aa11.98□□□□□ -0.49
COMMD2-201ENST00000463077 LINC00575Q6W349 94 aa11.97□□□□□ -0.49
COMMD2-201ENST00000463077 H7C2G1 150 aa11.95□□□□□ -0.5
COMMD2-201ENST00000463077 TSPAN13O95857 204 aa11.95□□□□□ -0.5
COMMD2-201ENST00000463077 BVES-AS1Q5T3Y7 98 aa11.95□□□□□ -0.5
COMMD2-201ENST00000463077 NHP2Q9NX24 153 aaKnown RBP11.94□□□□□ -0.5
COMMD2-201ENST00000463077 IGLV5-48A0A075B6I7 105 aa11.92□□□□□ -0.5
COMMD2-201ENST00000463077 LINC01547P58512 204 aaPredicted RBP11.92□□□□□ -0.5
COMMD2-201ENST00000463077 SLC25A20O43772 301 aa11.9□□□□□ -0.5
COMMD2-201ENST00000463077 CTAG1AP78358 180 aa11.9□□□□□ -0.5
COMMD2-201ENST00000463077 MUC17Q685J3 4493 aa11.9□□□□□ -0.51
COMMD2-201ENST00000463077 TEX49A0A1B0GTD5 131 aa11.89□□□□□ -0.51
COMMD2-201ENST00000463077 hADV29S1A0JD25 119 aa11.89□□□□□ -0.51
COMMD2-201ENST00000463077 K7ERJ3 54 aa11.89□□□□□ -0.51
COMMD2-201ENST00000463077 TSTD3H0UI37 97 aa11.88□□□□□ -0.51
COMMD2-201ENST00000463077 H0YGX0 51 aa11.88□□□□□ -0.51
COMMD2-201ENST00000463077 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
COMMD2-201ENST00000463077 LINC00304Q8N9R0 145 aa11.88□□□□□ -0.51
COMMD2-201ENST00000463077 DEFB105AQ8NG35 78 aa11.87□□□□□ -0.51
COMMD2-201ENST00000463077 IGLV9-49A0A0B4J1Y8 123 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms