RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SMIM11BQ8TCY0 68 aa8.87□□□□□ -0.99
COL6A1-202ENST00000463060 VPS13BQ7Z7G8 4022 aa8.86□□□□□ -0.99
COL6A1-202ENST00000463060 TRAV23DV6A0A075B6W5 121 aa8.86□□□□□ -0.99
COL6A1-202ENST00000463060 RPL28P46779 137 aaKnown RBP8.86□□□□□ -0.99
COL6A1-202ENST00000463060 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
COL6A1-202ENST00000463060 CBY1Q9Y3M2 126 aa8.85□□□□□ -0.99
COL6A1-202ENST00000463060 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
COL6A1-202ENST00000463060 TSPAN13O95857 204 aa8.84□□□□□ -0.99
COL6A1-202ENST00000463060 REG3GQ6UW15 175 aa8.84□□□□□ -0.99
COL6A1-202ENST00000463060 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
COL6A1-202ENST00000463060 H7C2G1 150 aa8.82□□□□□ -1
COL6A1-202ENST00000463060 TAX1BP3O14907 124 aa8.82□□□□□ -1
COL6A1-202ENST00000463060 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
COL6A1-202ENST00000463060 C6orf99Q4VX62 202 aa8.82□□□□□ -1
COL6A1-202ENST00000463060 BCE1O60756 84 aa8.81□□□□□ -1
COL6A1-202ENST00000463060 KRTAP10-4P60372 401 aaPredicted RBP8.81□□□□□ -1
COL6A1-202ENST00000463060 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
COL6A1-202ENST00000463060 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
COL6A1-202ENST00000463060 FAT1Q14517 4588 aa8.81□□□□□ -1
COL6A1-202ENST00000463060 B5MCH6 92 aa8.8□□□□□ -1
COL6A1-202ENST00000463060 COL5A1-AS1Q5SY13 56 aa8.8□□□□□ -1
COL6A1-202ENST00000463060 DIRC1Q969H9 104 aa8.8□□□□□ -1
COL6A1-202ENST00000463060 H0Y9J4 135 aa8.79□□□□□ -1
COL6A1-202ENST00000463060 TRIAP1O43715 76 aa8.79□□□□□ -1
COL6A1-202ENST00000463060 ELOF1P60002 83 aaKnown RBP8.78□□□□□ -1
COL6A1-202ENST00000463060 C1orf137Q5JT78 98 aa8.78□□□□□ -1
COL6A1-202ENST00000463060 ABCA13Q86UQ4 5058 aa8.77□□□□□ -1.01
COL6A1-202ENST00000463060 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
COL6A1-202ENST00000463060 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
COL6A1-202ENST00000463060 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
COL6A1-202ENST00000463060 COX7BP24311 80 aa8.77□□□□□ -1.01
COL6A1-202ENST00000463060 Q1RN00 199 aa8.77□□□□□ -1.01
COL6A1-202ENST00000463060 RPL37AP61513 92 aaKnown RBP8.76□□□□□ -1.01
COL6A1-202ENST00000463060 Q6ZRX8 168 aa8.76□□□□□ -1.01
COL6A1-202ENST00000463060 FAM19A1Q7Z5A9 133 aa8.76□□□□□ -1.01
COL6A1-202ENST00000463060 NAA38Q9BRA0 125 aaKnown RBP8.76□□□□□ -1.01
COL6A1-202ENST00000463060 H0YGX0 51 aa8.75□□□□□ -1.01
COL6A1-202ENST00000463060 Q9BRP9 147 aa8.75□□□□□ -1.01
COL6A1-202ENST00000463060 ZNF861PO60384 105 aa8.74□□□□□ -1.01
COL6A1-202ENST00000463060 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
COL6A1-202ENST00000463060 PSMB2P49721 201 aa8.74□□□□□ -1.01
COL6A1-202ENST00000463060 PRLHP81277 87 aa8.74□□□□□ -1.01
COL6A1-202ENST00000463060 VAMP3Q15836 100 aa8.74□□□□□ -1.01
COL6A1-202ENST00000463060 PKHD1L1Q86WI1 4243 aa8.74□□□□□ -1.01
COL6A1-202ENST00000463060 H3BUT2 72 aa8.73□□□□□ -1.01
COL6A1-202ENST00000463060 LINC00575Q6W349 94 aa8.73□□□□□ -1.01
COL6A1-202ENST00000463060 Q8N1X5 172 aa8.73□□□□□ -1.01
COL6A1-202ENST00000463060 SMCR5Q8TEV8 140 aa8.73□□□□□ -1.01
COL6A1-202ENST00000463060 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
COL6A1-202ENST00000463060 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
COL6A1-202ENST00000463060 UBE2AP49459 152 aa8.72□□□□□ -1.01
COL6A1-202ENST00000463060 FAM218AQ96MZ4 157 aa8.72□□□□□ -1.01
COL6A1-202ENST00000463060 ERC2-IT1O76042 136 aa8.71□□□□□ -1.02
COL6A1-202ENST00000463060 COX6CP09669 75 aa8.71□□□□□ -1.02
COL6A1-202ENST00000463060 A0A1W2PPM0 123 aa8.7□□□□□ -1.02
COL6A1-202ENST00000463060 CLEC2BQ92478 149 aa8.7□□□□□ -1.02
COL6A1-202ENST00000463060 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
COL6A1-202ENST00000463060 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
COL6A1-202ENST00000463060 Q5VSD8 79 aa8.69□□□□□ -1.02
COL6A1-202ENST00000463060 A0A1B0GX51 115 aa8.68□□□□□ -1.02
COL6A1-202ENST00000463060 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
COL6A1-202ENST00000463060 hADV29S1A0JD25 119 aa8.67□□□□□ -1.02
COL6A1-202ENST00000463060 LST1O00453 97 aa8.67□□□□□ -1.02
COL6A1-202ENST00000463060 HIGD2AQ9BW72 106 aa8.67□□□□□ -1.02
COL6A1-202ENST00000463060 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
COL6A1-202ENST00000463060 TCL1BO95988 128 aa8.66□□□□□ -1.02
COL6A1-202ENST00000463060 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
COL6A1-202ENST00000463060 TRBV20-1A0A075B6N2 111 aa8.64□□□□□ -1.03
COL6A1-202ENST00000463060 SLC25A20O43772 301 aa8.64□□□□□ -1.03
COL6A1-202ENST00000463060 TRACP01848 142 aa8.64□□□□□ -1.03
COL6A1-202ENST00000463060 FABP2P12104 132 aa8.64□□□□□ -1.03
COL6A1-202ENST00000463060 LYRM7Q5U5X0 104 aa8.64□□□□□ -1.03
COL6A1-202ENST00000463060 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
COL6A1-202ENST00000463060 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
COL6A1-202ENST00000463060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.62□□□□□ -1.03
COL6A1-202ENST00000463060 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
COL6A1-202ENST00000463060 ATXN8Q156A1 80 aa8.61□□□□□ -1.03
COL6A1-202ENST00000463060 Q6ZQY7 126 aa8.61□□□□□ -1.03
COL6A1-202ENST00000463060 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
COL6A1-202ENST00000463060 SPRR1BP22528 89 aa8.6□□□□□ -1.03
COL6A1-202ENST00000463060 SNCGO76070 127 aa8.59□□□□□ -1.03
COL6A1-202ENST00000463060 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
COL6A1-202ENST00000463060 LINC00483Q53H64 154 aa8.59□□□□□ -1.03
COL6A1-202ENST00000463060 Q8N377 158 aa8.59□□□□□ -1.03
COL6A1-202ENST00000463060 SPCS1Q9Y6A9 102 aa8.59□□□□□ -1.03
COL6A1-202ENST00000463060 K7EP34 96 aa8.58□□□□□ -1.04
COL6A1-202ENST00000463060 H3BMG7 143 aa8.57□□□□□ -1.04
COL6A1-202ENST00000463060 OCIAD2Q56VL3 154 aa8.57□□□□□ -1.04
COL6A1-202ENST00000463060 ZNF706Q9Y5V0 76 aaPredicted RBP8.56□□□□□ -1.04
COL6A1-202ENST00000463060 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
COL6A1-202ENST00000463060 DNAL4O96015 105 aa8.55□□□□□ -1.04
COL6A1-202ENST00000463060 SMIM29Q86T20 159 aa8.55□□□□□ -1.04
COL6A1-202ENST00000463060 DEFB105AQ8NG35 78 aa8.55□□□□□ -1.04
COL6A1-202ENST00000463060 PPDPFLQ8WWR9 84 aa8.55□□□□□ -1.04
COL6A1-202ENST00000463060 ANAPC11Q9NYG5 84 aa8.55□□□□□ -1.04
COL6A1-202ENST00000463060 A0A1B0GV90 55 aa8.54□□□□□ -1.04
COL6A1-202ENST00000463060 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
COL6A1-202ENST00000463060 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
COL6A1-202ENST00000463060 C9JAW5 83 aa8.52□□□□□ -1.05
COL6A1-202ENST00000463060 H3BQ85 93 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms