RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 KRTAP4-16G5E9R7 235 aaPredicted RBP11.67□□□□□ -0.54
XPA-202ENST00000462523 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
XPA-202ENST00000462523 ZNF861PO60384 105 aa11.67□□□□□ -0.54
XPA-202ENST00000462523 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
XPA-202ENST00000462523 OR13C6PQ8NH95 151 aa11.66□□□□□ -0.54
XPA-202ENST00000462523 TRAV23DV6A0A075B6W5 121 aa11.65□□□□□ -0.54
XPA-202ENST00000462523 PRLHP81277 87 aa11.65□□□□□ -0.54
XPA-202ENST00000462523 FAM19A1Q7Z5A9 133 aa11.65□□□□□ -0.54
XPA-202ENST00000462523 FXYD2P54710 66 aa11.63□□□□□ -0.55
XPA-202ENST00000462523 UBE2AP49459 152 aa11.62□□□□□ -0.55
XPA-202ENST00000462523 CTAG1AP78358 180 aa11.62□□□□□ -0.55
XPA-202ENST00000462523 TMEM238LA0A1B0GVL6 79 aa11.62□□□□□ -0.55
XPA-202ENST00000462523 A6NDN8 102 aa11.62□□□□□ -0.55
XPA-202ENST00000462523 A6NJY4 79 aa11.62□□□□□ -0.55
XPA-202ENST00000462523 H0Y9J4 135 aa11.62□□□□□ -0.55
XPA-202ENST00000462523 RPL28P46779 137 aaKnown RBP11.62□□□□□ -0.55
XPA-202ENST00000462523 ZNF73O43830 326 aaPredicted RBP11.61□□□□□ -0.55
XPA-202ENST00000462523 FAT3Q8TDW7 4589 aa11.61□□□□□ -0.55
XPA-202ENST00000462523 TRAV13-2A0A0B4J235 113 aa11.6□□□□□ -0.55
XPA-202ENST00000462523 DIRC1Q969H9 104 aa11.6□□□□□ -0.55
XPA-202ENST00000462523 B5MCH6 92 aa11.59□□□□□ -0.55
XPA-202ENST00000462523 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
XPA-202ENST00000462523 CFC1P0CG37 223 aa11.59□□□□□ -0.55
XPA-202ENST00000462523 ETDCA0A1B0GVM5 59 aa11.58□□□□□ -0.55
XPA-202ENST00000462523 PCP4L1A6NKN8 68 aa11.58□□□□□ -0.55
XPA-202ENST00000462523 RAB37Q96AX2 223 aa11.57□□□□□ -0.56
XPA-202ENST00000462523 A0A0B4J2C4 111 aa11.56□□□□□ -0.56
XPA-202ENST00000462523 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
XPA-202ENST00000462523 BVES-AS1Q5T3Y7 98 aa11.56□□□□□ -0.56
XPA-202ENST00000462523 Q6ZRX8 168 aa11.56□□□□□ -0.56
XPA-202ENST00000462523 NHP2Q9NX24 153 aaKnown RBP11.56□□□□□ -0.56
XPA-202ENST00000462523 C6orf99Q4VX62 202 aa11.55□□□□□ -0.56
XPA-202ENST00000462523 SMIM11BQ8TCY0 68 aa11.55□□□□□ -0.56
XPA-202ENST00000462523 SMCR5Q8TEV8 140 aa11.55□□□□□ -0.56
XPA-202ENST00000462523 Q9BRP9 147 aa11.55□□□□□ -0.56
XPA-202ENST00000462523 CBY1Q9Y3M2 126 aa11.55□□□□□ -0.56
XPA-202ENST00000462523 M0R143 59 aa11.54□□□□□ -0.56
XPA-202ENST00000462523 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
XPA-202ENST00000462523 RPL13AP40429 203 aaKnown RBP11.54□□□□□ -0.56
XPA-202ENST00000462523 HIGD2AQ9BW72 106 aa11.54□□□□□ -0.56
XPA-202ENST00000462523 KRTAP29-1A8MX34 341 aaPredicted RBP11.51□□□□□ -0.57
XPA-202ENST00000462523 K7ERJ3 54 aa11.51□□□□□ -0.57
XPA-202ENST00000462523 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
XPA-202ENST00000462523 H7C2G1 150 aa11.5□□□□□ -0.57
XPA-202ENST00000462523 ERC2-IT1O76042 136 aa11.5□□□□□ -0.57
XPA-202ENST00000462523 ELOF1P60002 83 aaKnown RBP11.5□□□□□ -0.57
XPA-202ENST00000462523 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
XPA-202ENST00000462523 LINC01600Q96MT4 127 aa11.5□□□□□ -0.57
XPA-202ENST00000462523 OXTP01178 125 aa11.49□□□□□ -0.57
XPA-202ENST00000462523 TRBV7-6A0A0J9YX20 115 aa11.47□□□□□ -0.57
XPA-202ENST00000462523 MT1HL1P0DM35 61 aa11.47□□□□□ -0.57
XPA-202ENST00000462523 COX7BP24311 80 aa11.47□□□□□ -0.57
XPA-202ENST00000462523 BATFQ16520 125 aa11.47□□□□□ -0.57
XPA-202ENST00000462523 ANAPC11Q9NYG5 84 aa11.46□□□□□ -0.57
XPA-202ENST00000462523 Q1RN00 199 aa11.45□□□□□ -0.58
XPA-202ENST00000462523 TNXBP22105 4242 aa11.44□□□□□ -0.58
XPA-202ENST00000462523 SPRR4Q96PI1 79 aa11.44□□□□□ -0.58
XPA-202ENST00000462523 A0A087X002 238 aa11.42□□□□□ -0.58
XPA-202ENST00000462523 PRR26Q8N8Z3 221 aa11.42□□□□□ -0.58
XPA-202ENST00000462523 KRTAP10-8P60410 259 aa11.41□□□□□ -0.58
XPA-202ENST00000462523 DHRS4-AS1Q9P1J3 65 aa11.41□□□□□ -0.58
XPA-202ENST00000462523 TSPAN13O95857 204 aa11.4□□□□□ -0.58
XPA-202ENST00000462523 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.58
XPA-202ENST00000462523 SNHG12Q9BXW3 62 aa11.4□□□□□ -0.58
XPA-202ENST00000462523 VAMP3Q15836 100 aa11.39□□□□□ -0.59
XPA-202ENST00000462523 ZNF706Q9Y5V0 76 aaPredicted RBP11.38□□□□□ -0.59
XPA-202ENST00000462523 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
XPA-202ENST00000462523 J3QL48 77 aa11.37□□□□□ -0.59
XPA-202ENST00000462523 KRTAP13-2Q52LG2 175 aa11.37□□□□□ -0.59
XPA-202ENST00000462523 LINC00483Q53H64 154 aa11.37□□□□□ -0.59
XPA-202ENST00000462523 LINC00575Q6W349 94 aa11.37□□□□□ -0.59
XPA-202ENST00000462523 TRIAP1O43715 76 aa11.36□□□□□ -0.59
XPA-202ENST00000462523 PSMB2P49721 201 aa11.36□□□□□ -0.59
XPA-202ENST00000462523 FAM229BQ4G0N7 80 aa11.36□□□□□ -0.59
XPA-202ENST00000462523 GAGE2AQ6NT46 116 aa11.35□□□□□ -0.59
XPA-202ENST00000462523 CRYGAP11844 174 aa11.33□□□□□ -0.6
XPA-202ENST00000462523 FAM218AQ96MZ4 157 aa11.32□□□□□ -0.6
XPA-202ENST00000462523 HERC1Q15751 4861 aa11.31□□□□□ -0.6
XPA-202ENST00000462523 H0YGX0 51 aa11.31□□□□□ -0.6
XPA-202ENST00000462523 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
XPA-202ENST00000462523 C3orf22Q8N5N4 141 aa11.31□□□□□ -0.6
XPA-202ENST00000462523 NAA38Q9BRA0 125 aaKnown RBP11.31□□□□□ -0.6
XPA-202ENST00000462523 hADV29S1A0JD25 119 aa11.3□□□□□ -0.6
XPA-202ENST00000462523 SLC25A20O43772 301 aa11.3□□□□□ -0.6
XPA-202ENST00000462523 COX6CP09669 75 aa11.3□□□□□ -0.6
XPA-202ENST00000462523 SPRR1BP22528 89 aa11.29□□□□□ -0.6
XPA-202ENST00000462523 IGLV5-48A0A075B6I7 105 aa11.28□□□□□ -0.6
XPA-202ENST00000462523 TAX1BP3O14907 124 aa11.27□□□□□ -0.61
XPA-202ENST00000462523 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
XPA-202ENST00000462523 DEFB105AQ8NG35 78 aa11.27□□□□□ -0.61
XPA-202ENST00000462523 CLEC2BQ92478 149 aa11.27□□□□□ -0.61
XPA-202ENST00000462523 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
XPA-202ENST00000462523 Q6ZQY7 126 aa11.26□□□□□ -0.61
XPA-202ENST00000462523 TYMSOSQ8TAI1 123 aa11.26□□□□□ -0.61
XPA-202ENST00000462523 H3BUT2 72 aa11.24□□□□□ -0.61
XPA-202ENST00000462523 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
XPA-202ENST00000462523 C9orf118A6NHY6 69 aa11.24□□□□□ -0.61
XPA-202ENST00000462523 Q8N377 158 aa11.24□□□□□ -0.61
XPA-202ENST00000462523 SMIM29Q86T20 159 aa11.23□□□□□ -0.61
XPA-202ENST00000462523 IGLV9-49A0A0B4J1Y8 123 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms