RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FHL2Q14192 279 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 SMCR5Q8TEV8 140 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 PRO0255Q9UI72 69 aa4.08□□□□□ -1.76
SMARCC1-204ENST00000462198 H3BNG1 76 aa4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 H7BZZ5 65 aa4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 CCKP06307 115 aa4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 RHOHQ15669 191 aa4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 C14orf178Q8N769 122 aaPredicted RBP4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 TMEM141Q96I45 108 aa4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 CYSTM1Q9H1C7 97 aa4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 UBE2D4Q9Y2X8 147 aa4.07□□□□□ -1.76
SMARCC1-204ENST00000462198 TRAV13-2A0A0B4J235 113 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 IBA57-AS1B1ANH7 110 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 LEPROTO15243 131 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 NDUFS5O43920 106 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 TSHBP01222 138 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 MGPP08493 103 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 LINC00315P59091 139 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 RBM3P98179 157 aaKnown RBP4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 C2orf66Q6UXQ4 117 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 DAZ4Q86SG3 579 aaKnown RBP4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 TIMM17AQ99595 171 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 DAZ3Q9NR90 486 aaKnown RBP4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 Q9UF83 564 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 KIF25-AS1Q9Y6Z4 181 aa4.06□□□□□ -1.76
SMARCC1-204ENST00000462198 TRBV6-5A0A0K0K1A5 114 aa4.05□□□□□ -1.76
SMARCC1-204ENST00000462198 K7EQD1 137 aa4.05□□□□□ -1.76
SMARCC1-204ENST00000462198 COX7A2LO14548 114 aa4.05□□□□□ -1.76
SMARCC1-204ENST00000462198 POLR2KP53803 58 aaKnown RBP4.05□□□□□ -1.76
SMARCC1-204ENST00000462198 CCL18P55774 89 aa4.05□□□□□ -1.76
SMARCC1-204ENST00000462198 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
SMARCC1-204ENST00000462198 A0A096LPF7 62 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 IGLV5-39A0A0G2JS06 123 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 TRBV27A0A0K0K1C4 114 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 ERC2-IT1O76042 136 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 TSPEAR-AS2P59090 65 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 KRTAP10-1P60331 282 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 PRR26Q8N8Z3 221 aa4.04□□□□□ -1.76
SMARCC1-204ENST00000462198 TRAV8-3A0A0A6YYJ7 113 aa4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 H7C2G1 150 aa4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 RPL36AP83881 106 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 ESRGQ1W209 222 aa4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 MUSTN1Q8IVN3 82 aa4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 DEFB104AQ8WTQ1 72 aa4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 RPL36ALQ969Q0 106 aaKnown RBP4.03□□□□□ -1.76
SMARCC1-204ENST00000462198 LRP1Q07954 4544 aaKnown RBP4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 I3L3M4 83 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 M0QY20 66 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 UBE2L6O14933 153 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 UBE2BP63146 152 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 HAMPP81172 84 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 MIAQ16674 131 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 LYPD5Q6UWN5 251 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 RPL39LQ96EH5 51 aaKnown RBP4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 LINC00588Q9Y4M8 146 aa4.02□□□□□ -1.77
SMARCC1-204ENST00000462198 PRSS2P07478 247 aa4.01□□□□□ -1.77
SMARCC1-204ENST00000462198 BAALC-AS2P0C853 105 aa4.01□□□□□ -1.77
SMARCC1-204ENST00000462198 LITAFQ99732 161 aa4.01□□□□□ -1.77
SMARCC1-204ENST00000462198 IGHV3-38A0A0C4DH36 116 aa4□□□□□ -1.77
SMARCC1-204ENST00000462198 Q1T7F1 81 aa4□□□□□ -1.77
SMARCC1-204ENST00000462198 OBSCN-AS1Q96MR7 158 aa4□□□□□ -1.77
SMARCC1-204ENST00000462198 RBM12B-AS1Q9P1G2 102 aa4□□□□□ -1.77
SMARCC1-204ENST00000462198 LRP2P98164 4655 aa4□□□□□ -1.77
SMARCC1-204ENST00000462198 IGLV5-37A0A075B6J1 123 aa3.99□□□□□ -1.77
SMARCC1-204ENST00000462198 LELP1Q5T871 98 aa3.99□□□□□ -1.77
SMARCC1-204ENST00000462198 Q6ZVQ6 151 aa3.99□□□□□ -1.77
SMARCC1-204ENST00000462198 CLEC2BQ92478 149 aa3.99□□□□□ -1.77
SMARCC1-204ENST00000462198 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
SMARCC1-204ENST00000462198 IGKV3D-7A0A0C4DH55 119 aa3.98□□□□□ -1.77
SMARCC1-204ENST00000462198 F8WEM9 126 aa3.98□□□□□ -1.77
SMARCC1-204ENST00000462198 CIRBPQ14011 172 aaKnown RBP3.98□□□□□ -1.77
SMARCC1-204ENST00000462198 WFDC10BQ8IUB3 73 aa3.98□□□□□ -1.77
SMARCC1-204ENST00000462198 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
SMARCC1-204ENST00000462198 TRBV6-8A0A0A6YYG3 113 aa3.97□□□□□ -1.77
SMARCC1-204ENST00000462198 JMJD7-PLA2G4BH0Y9G9 81 aa3.97□□□□□ -1.77
SMARCC1-204ENST00000462198 RPL39P62891 51 aaKnown RBP3.97□□□□□ -1.77
SMARCC1-204ENST00000462198 SS18Q15532 418 aa3.97□□□□□ -1.77
SMARCC1-204ENST00000462198 C20orf203Q8NBC4 194 aa3.97□□□□□ -1.77
SMARCC1-204ENST00000462198 UBL5Q9BZL1 73 aa3.97□□□□□ -1.77
SMARCC1-204ENST00000462198 IGLV4-3A0A075B6K6 122 aa3.96□□□□□ -1.78
SMARCC1-204ENST00000462198 H0YGX0 51 aa3.96□□□□□ -1.78
SMARCC1-204ENST00000462198 DNAH10OSP0CZ25 163 aa3.96□□□□□ -1.78
SMARCC1-204ENST00000462198 IGHV3-30-3P0DP02 117 aa3.96□□□□□ -1.78
SMARCC1-204ENST00000462198 NTM-AS1Q6ZSK4 140 aa3.96□□□□□ -1.78
SMARCC1-204ENST00000462198 PHF5AQ7RTV0 110 aaKnown RBP3.96□□□□□ -1.78
SMARCC1-204ENST00000462198 LINC00474Q9P2X8 69 aa3.96□□□□□ -1.78
SMARCC1-204ENST00000462198 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
SMARCC1-204ENST00000462198 A0A087WVE0 104 aa3.95□□□□□ -1.78
SMARCC1-204ENST00000462198 UBE2AP49459 152 aa3.95□□□□□ -1.78
SMARCC1-204ENST00000462198 LINC01556Q5JQF7 62 aa3.95□□□□□ -1.78
SMARCC1-204ENST00000462198 Q6ZRN7 208 aaPredicted RBP3.95□□□□□ -1.78
SMARCC1-204ENST00000462198 LINC00846Q9NV44 126 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms