RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 DEFB131BA0A096LNP1 70 aa1.76□□□□□ -2.13
CKAP2-204ENST00000459902 CRIP1P50238 77 aa1.76□□□□□ -2.13
CKAP2-204ENST00000459902 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.76□□□□□ -2.13
CKAP2-204ENST00000459902 SMIM2Q9BVW6 85 aa1.76□□□□□ -2.13
CKAP2-204ENST00000459902 CACNA1CQ13936 2221 aa1.76□□□□□ -2.13
CKAP2-204ENST00000459902 G3V318 75 aa1.75□□□□□ -2.13
CKAP2-204ENST00000459902 IAPPP10997 89 aa1.75□□□□□ -2.13
CKAP2-204ENST00000459902 Q6ZRX8 168 aa1.75□□□□□ -2.13
CKAP2-204ENST00000459902 LINC00308Q8TCZ7 52 aa1.75□□□□□ -2.13
CKAP2-204ENST00000459902 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
CKAP2-204ENST00000459902 LY6G6CO95867 125 aa1.74□□□□□ -2.13
CKAP2-204ENST00000459902 LINC00158P58513 81 aa1.74□□□□□ -2.13
CKAP2-204ENST00000459902 RPS27LQ71UM5 84 aaKnown RBP1.74□□□□□ -2.13
CKAP2-204ENST00000459902 SMIM11BQ8TCY0 68 aa1.74□□□□□ -2.13
CKAP2-204ENST00000459902 CNFNQ9BYD5 112 aa1.74□□□□□ -2.13
CKAP2-204ENST00000459902 MED13LQ71F56 2210 aa1.74□□□□□ -2.13
CKAP2-204ENST00000459902 SPTY2D1-AS1A0A0U1RR47 76 aa1.73□□□□□ -2.13
CKAP2-204ENST00000459902 ARHGAP5-AS1Q96IT6 56 aa1.73□□□□□ -2.13
CKAP2-204ENST00000459902 BPTFQ12830 3046 aa1.72□□□□□ -2.13
CKAP2-204ENST00000459902 GVQW2A0A096LPI5 108 aaPredicted RBP1.72□□□□□ -2.13
CKAP2-204ENST00000459902 NDUFA1O15239 70 aa1.72□□□□□ -2.13
CKAP2-204ENST00000459902 F5P12259 2224 aa1.72□□□□□ -2.13
CKAP2-204ENST00000459902 SSC5DA1L4H1 1573 aa1.72□□□□□ -2.13
CKAP2-204ENST00000459902 ANGP03950 147 aaKnown RBP1.71□□□□□ -2.14
CKAP2-204ENST00000459902 C10orf99Q6UWK7 81 aa1.71□□□□□ -2.14
CKAP2-204ENST00000459902 Q8IZM0 81 aa1.71□□□□□ -2.14
CKAP2-204ENST00000459902 CDKN2A-AS1Q9UH64 79 aa1.71□□□□□ -2.14
CKAP2-204ENST00000459902 TECTAO75443 2155 aa1.71□□□□□ -2.14
CKAP2-204ENST00000459902 FLG2Q5D862 2391 aaPredicted RBP1.7□□□□□ -2.14
CKAP2-204ENST00000459902 A0A096LNT2 108 aa1.7□□□□□ -2.14
CKAP2-204ENST00000459902 LYNX1P0DP58 116 aa1.7□□□□□ -2.14
CKAP2-204ENST00000459902 RTTNQ86VV8 2226 aa1.7□□□□□ -2.14
CKAP2-204ENST00000459902 TTTY10Q9BZA0 68 aa1.69□□□□□ -2.14
CKAP2-204ENST00000459902 LOC730098B7Z3J9 87 aa1.67□□□□□ -2.14
CKAP2-204ENST00000459902 KRTAP10-4P60372 401 aaPredicted RBP1.67□□□□□ -2.14
CKAP2-204ENST00000459902 PRB3Q04118 309 aaPredicted RBP1.67□□□□□ -2.14
CKAP2-204ENST00000459902 LINC01590Q5TEZ4 76 aa1.67□□□□□ -2.14
CKAP2-204ENST00000459902 PRO3102Q9H379 93 aa1.67□□□□□ -2.14
CKAP2-204ENST00000459902 CADP27708 2225 aa1.67□□□□□ -2.14
CKAP2-204ENST00000459902 CRIPTQ9P021 101 aa1.66□□□□□ -2.14
CKAP2-204ENST00000459902 SPINK13Q1W4C9 94 aa1.65□□□□□ -2.15
CKAP2-204ENST00000459902 ALMS1Q8TCU4 4167 aa1.64□□□□□ -2.15
CKAP2-204ENST00000459902 URB1O60287 2271 aaKnown RBP1.64□□□□□ -2.15
CKAP2-204ENST00000459902 ABCA1O95477 2261 aa1.64□□□□□ -2.15
CKAP2-204ENST00000459902 LYNX1G3V0Z9 82 aa1.64□□□□□ -2.15
CKAP2-204ENST00000459902 LINC00575Q6W349 94 aa1.64□□□□□ -2.15
CKAP2-204ENST00000459902 UBE2DNLQ8IWF7 75 aa1.63□□□□□ -2.15
CKAP2-204ENST00000459902 COL6A6A6NMZ7 2263 aa1.63□□□□□ -2.15
CKAP2-204ENST00000459902 H3BSH0 61 aa1.62□□□□□ -2.15
CKAP2-204ENST00000459902 POLR2KP53803 58 aaKnown RBP1.62□□□□□ -2.15
CKAP2-204ENST00000459902 RPL37P61927 97 aaKnown RBP1.62□□□□□ -2.15
CKAP2-204ENST00000459902 TP53AIP1Q9HCN2 124 aa1.62□□□□□ -2.15
CKAP2-204ENST00000459902 K7EQZ3 153 aa1.61□□□□□ -2.15
CKAP2-204ENST00000459902 MINOS1Q5TGZ0 78 aa1.61□□□□□ -2.15
CKAP2-204ENST00000459902 COX6B2Q6YFQ2 88 aa1.61□□□□□ -2.15
CKAP2-204ENST00000459902 MRPL34Q9BQ48 92 aaKnown RBP1.61□□□□□ -2.15
CKAP2-204ENST00000459902 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
CKAP2-204ENST00000459902 USMG5Q96IX5 58 aa1.6□□□□□ -2.15
CKAP2-204ENST00000459902 C6orf48Q9UBA6 75 aa1.6□□□□□ -2.15
CKAP2-204ENST00000459902 KNTC1P50748 2209 aa1.6□□□□□ -2.15
CKAP2-204ENST00000459902 ANKRD17O75179 2603 aaKnown RBP1.6□□□□□ -2.15
CKAP2-204ENST00000459902 RPL39P62891 51 aaKnown RBP1.59□□□□□ -2.15
CKAP2-204ENST00000459902 H0YAA0 97 aa1.58□□□□□ -2.16
CKAP2-204ENST00000459902 I3L2K1 104 aa1.57□□□□□ -2.16
CKAP2-204ENST00000459902 CCL22O00626 93 aa1.57□□□□□ -2.16
CKAP2-204ENST00000459902 RPL39LQ96EH5 51 aaKnown RBP1.57□□□□□ -2.16
CKAP2-204ENST00000459902 PIGYQ3MUY2 71 aa1.56□□□□□ -2.16
CKAP2-204ENST00000459902 WFDC13Q8IUB5 93 aa1.56□□□□□ -2.16
CKAP2-204ENST00000459902 DEFB123Q8N688 67 aa1.56□□□□□ -2.16
CKAP2-204ENST00000459902 ASXL3Q9C0F0 2248 aa1.56□□□□□ -2.16
CKAP2-204ENST00000459902 IGLV5-48A0A075B6I7 105 aa1.55□□□□□ -2.16
CKAP2-204ENST00000459902 SPINK9Q5DT21 86 aa1.55□□□□□ -2.16
CKAP2-204ENST00000459902 WFDC10BQ8IUB3 73 aa1.55□□□□□ -2.16
CKAP2-204ENST00000459902 PRCDQ00LT1 54 aa1.54□□□□□ -2.16
CKAP2-204ENST00000459902 RPS27P42677 84 aaKnown RBP1.53□□□□□ -2.16
CKAP2-204ENST00000459902 COX6A2Q02221 97 aa1.53□□□□□ -2.16
CKAP2-204ENST00000459902 C10orf95Q9H7T3 257 aa1.53□□□□□ -2.16
CKAP2-204ENST00000459902 LEAP2Q969E1 77 aa1.52□□□□□ -2.17
CKAP2-204ENST00000459902 CNOT1A5YKK6 2376 aaKnown RBP1.52□□□□□ -2.17
CKAP2-204ENST00000459902 H1FX-AS1Q4G0G2 97 aa1.51□□□□□ -2.17
CKAP2-204ENST00000459902 LELP1Q5T871 98 aa1.51□□□□□ -2.17
CKAP2-204ENST00000459902 PTPRQQ9UMZ3 2332 aa1.51□□□□□ -2.17
CKAP2-204ENST00000459902 AHCTF1Q8WYP5 2266 aa1.51□□□□□ -2.17
CKAP2-204ENST00000459902 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.5□□□□□ -2.17
CKAP2-204ENST00000459902 ASCC3Q8N3C0 2202 aaKnown RBP1.5□□□□□ -2.17
CKAP2-204ENST00000459902 KAAG1Q9UBP8 84 aa1.5□□□□□ -2.17
CKAP2-204ENST00000459902 CACNA1EQ15878 2313 aa1.5□□□□□ -2.17
CKAP2-204ENST00000459902 DEFB130BP0DP73 79 aa1.49□□□□□ -2.17
CKAP2-204ENST00000459902 DEFB130AP0DP74 79 aa1.49□□□□□ -2.17
CKAP2-204ENST00000459902 DEFB131AP59861 70 aa1.49□□□□□ -2.17
CKAP2-204ENST00000459902 K7EIL1 84 aa1.48□□□□□ -2.17
CKAP2-204ENST00000459902 M0QY20 66 aa1.48□□□□□ -2.17
CKAP2-204ENST00000459902 DOPEY2Q9Y3R5 2298 aa1.48□□□□□ -2.17
CKAP2-204ENST00000459902 MMP24-AS1A0A0U1RRL7 71 aa1.47□□□□□ -2.17
CKAP2-204ENST00000459902 WT1-ASQ06250 92 aa1.46□□□□□ -2.18
CKAP2-204ENST00000459902 APLNQ9ULZ1 77 aa1.46□□□□□ -2.18
CKAP2-204ENST00000459902 PDE4DIPQ5VU43 2346 aa1.46□□□□□ -2.18
CKAP2-204ENST00000459902 SPRR1AP35321 89 aa1.45□□□□□ -2.18
CKAP2-204ENST00000459902 H3BUA1 57 aa1.44□□□□□ -2.18
CKAP2-204ENST00000459902 DEFB105AQ8NG35 78 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms