RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 TP53AIP1Q9HCN2 124 aa3.66□□□□□ -1.82
HMGB4-202ENST00000458277 DEFB131BA0A096LNP1 70 aa3.65□□□□□ -1.83
HMGB4-202ENST00000458277 LINC00959A0A1B0GUT2 108 aa3.65□□□□□ -1.83
HMGB4-202ENST00000458277 MAP6D1Q9H9H5 199 aa3.65□□□□□ -1.83
HMGB4-202ENST00000458277 ATRXP46100 2492 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 IGKV2D-24A0A075B6R9 120 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 GVQW2A0A096LPI5 108 aaPredicted RBP3.64□□□□□ -1.83
HMGB4-202ENST00000458277 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 C1orf134Q5TEV5 83 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 C5orf56Q8N8D9 126 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 Q8NBF4 154 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 DHRS4-AS1Q9P1J3 65 aa3.64□□□□□ -1.83
HMGB4-202ENST00000458277 UBR5O95071 2799 aaPredicted RBP3.63□□□□□ -1.83
HMGB4-202ENST00000458277 TENM4Q6N022 2769 aa3.63□□□□□ -1.83
HMGB4-202ENST00000458277 SMG1Q96Q15 3661 aaKnown RBP3.63□□□□□ -1.83
HMGB4-202ENST00000458277 SPINK7P58062 85 aa3.63□□□□□ -1.83
HMGB4-202ENST00000458277 ROMO1P60602 79 aa3.63□□□□□ -1.83
HMGB4-202ENST00000458277 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
HMGB4-202ENST00000458277 KLK12Q9UKR0 248 aa3.63□□□□□ -1.83
HMGB4-202ENST00000458277 SVILO95425 2214 aa3.63□□□□□ -1.83
HMGB4-202ENST00000458277 IGKV3-7A0A075B6H7 116 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 A0A1W2PNM2 257 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 G3V318 75 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 UQCR11O14957 56 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 MSMBP08118 114 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 CMC4P56277 68 aaPredicted RBP3.62□□□□□ -1.83
HMGB4-202ENST00000458277 DSCR10P59022 87 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 PIEZO2Q9H5I5 2752 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 CADP27708 2225 aa3.62□□□□□ -1.83
HMGB4-202ENST00000458277 CACNA1BQ00975 2339 aa3.61□□□□□ -1.83
HMGB4-202ENST00000458277 FAM208BQ5VWN6 2430 aa3.61□□□□□ -1.83
HMGB4-202ENST00000458277 IGKV3-20P01619 116 aa3.61□□□□□ -1.83
HMGB4-202ENST00000458277 PRB1P04280 392 aa3.61□□□□□ -1.83
HMGB4-202ENST00000458277 HTN1P15515 57 aa3.61□□□□□ -1.83
HMGB4-202ENST00000458277 DEFB1P60022 68 aa3.61□□□□□ -1.83
HMGB4-202ENST00000458277 REG3GQ6UW15 175 aa3.61□□□□□ -1.83
HMGB4-202ENST00000458277 CHCHD10Q8WYQ3 142 aaPredicted RBP3.61□□□□□ -1.83
HMGB4-202ENST00000458277 GCN1Q92616 2671 aaKnown RBP3.61□□□□□ -1.83
HMGB4-202ENST00000458277 RP1L1Q8IWN7 2480 aaPredicted RBP3.6□□□□□ -1.83
HMGB4-202ENST00000458277 K7EQZ3 153 aa3.6□□□□□ -1.83
HMGB4-202ENST00000458277 C1orf137Q5JT78 98 aa3.6□□□□□ -1.83
HMGB4-202ENST00000458277 BSNQ9UPA5 3926 aa3.6□□□□□ -1.83
HMGB4-202ENST00000458277 FLNCQ14315 2725 aa3.6□□□□□ -1.83
HMGB4-202ENST00000458277 SPENQ96T58 3664 aaKnown RBP3.6□□□□□ -1.83
HMGB4-202ENST00000458277 NBASA2RRP1 2371 aa3.59□□□□□ -1.83
HMGB4-202ENST00000458277 TRGV1A0A0A0MS02 117 aa3.59□□□□□ -1.83
HMGB4-202ENST00000458277 RPL37AP8A6NKH3 93 aa3.59□□□□□ -1.83
HMGB4-202ENST00000458277 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
HMGB4-202ENST00000458277 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
HMGB4-202ENST00000458277 PRRC2CQ9Y520 2896 aaKnown RBP3.59□□□□□ -1.84
HMGB4-202ENST00000458277 ZNF462Q96JM2 2506 aa3.59□□□□□ -1.84
HMGB4-202ENST00000458277 HELZ2Q9BYK8 2649 aaKnown RBP3.58□□□□□ -1.84
HMGB4-202ENST00000458277 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
HMGB4-202ENST00000458277 B4DSR2 109 aa3.58□□□□□ -1.84
HMGB4-202ENST00000458277 PRB2P02812 416 aaPredicted RBP3.58□□□□□ -1.84
HMGB4-202ENST00000458277 C16orf74Q96GX8 76 aa3.58□□□□□ -1.84
HMGB4-202ENST00000458277 DNAJC13O75165 2243 aa3.58□□□□□ -1.84
HMGB4-202ENST00000458277 COL6A6A6NMZ7 2263 aa3.58□□□□□ -1.84
HMGB4-202ENST00000458277 A0A087WSZ3 146 aa3.57□□□□□ -1.84
HMGB4-202ENST00000458277 A0A1B0GU69 56 aa3.57□□□□□ -1.84
HMGB4-202ENST00000458277 ACYP2P14621 99 aa3.57□□□□□ -1.84
HMGB4-202ENST00000458277 IGLV5-37A0A075B6J1 123 aa3.56□□□□□ -1.84
HMGB4-202ENST00000458277 KRTAP16-1A8MUX0 517 aa3.56□□□□□ -1.84
HMGB4-202ENST00000458277 A8MWP4 228 aa3.56□□□□□ -1.84
HMGB4-202ENST00000458277 RELNP78509 3460 aa3.56□□□□□ -1.84
HMGB4-202ENST00000458277 ASH1LQ9NR48 2969 aaKnown RBP3.55□□□□□ -1.84
HMGB4-202ENST00000458277 CDK2AP2O75956 126 aa3.55□□□□□ -1.84
HMGB4-202ENST00000458277 DEFB131AP59861 70 aa3.55□□□□□ -1.84
HMGB4-202ENST00000458277 WFDC10BQ8IUB3 73 aa3.55□□□□□ -1.84
HMGB4-202ENST00000458277 Q8N377 158 aa3.55□□□□□ -1.84
HMGB4-202ENST00000458277 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
HMGB4-202ENST00000458277 UTP20O75691 2785 aaKnown RBP3.55□□□□□ -1.84
HMGB4-202ENST00000458277 MYO18BQ8IUG5 2567 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 IGLV1-50A0A075B6I6 118 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 H3BUX3 64 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 K7ERS5 55 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 SEC61BP60468 96 aaKnown RBP3.54□□□□□ -1.84
HMGB4-202ENST00000458277 EGFEM1PQ0D2K5 195 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 Q6ZR54 194 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 ADM2Q7Z4H4 148 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 DOPEY1Q5JWR5 2465 aa3.54□□□□□ -1.84
HMGB4-202ENST00000458277 HIVEP3Q5T1R4 2406 aa3.53□□□□□ -1.84
HMGB4-202ENST00000458277 COL12A1Q99715 3063 aa3.53□□□□□ -1.84
HMGB4-202ENST00000458277 USP9XQ93008 2570 aaPredicted RBP3.53□□□□□ -1.84
HMGB4-202ENST00000458277 IGKV2D-30A0A075B6S6 120 aa3.53□□□□□ -1.84
HMGB4-202ENST00000458277 HRES1P13985 223 aa3.53□□□□□ -1.84
HMGB4-202ENST00000458277 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
HMGB4-202ENST00000458277 ANKHD1Q8IWZ3 2542 aaKnown RBP3.53□□□□□ -1.84
HMGB4-202ENST00000458277 ABCA1O95477 2261 aa3.53□□□□□ -1.85
HMGB4-202ENST00000458277 IGLV10-54A0A075B6I4 117 aa3.52□□□□□ -1.85
HMGB4-202ENST00000458277 SPTAN1Q13813 2472 aaKnown RBP3.52□□□□□ -1.85
HMGB4-202ENST00000458277 FASNP49327 2511 aaKnown RBP3.51□□□□□ -1.85
HMGB4-202ENST00000458277 LRRK2Q5S007 2527 aa3.51□□□□□ -1.85
HMGB4-202ENST00000458277 SETXQ7Z333 2677 aaKnown RBP3.51□□□□□ -1.85
HMGB4-202ENST00000458277 BAHCC1Q9P281 2608 aa3.51□□□□□ -1.85
HMGB4-202ENST00000458277 SPTBN1Q01082 2364 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms