RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 A0A0B4J2C4 111 aa9.94□□□□□ -0.82
PKNOX1-204ENST00000456957 BCE1O60756 84 aa9.94□□□□□ -0.82
PKNOX1-204ENST00000456957 BVES-AS1Q5T3Y7 98 aa9.94□□□□□ -0.82
PKNOX1-204ENST00000456957 SPRR1AP35321 89 aa9.93□□□□□ -0.82
PKNOX1-204ENST00000456957 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-204ENST00000456957 HINT1P49773 126 aaPredicted RBP9.93□□□□□ -0.82
PKNOX1-204ENST00000456957 RAB37Q96AX2 223 aa9.93□□□□□ -0.82
PKNOX1-204ENST00000456957 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
PKNOX1-204ENST00000456957 M0R143 59 aa9.92□□□□□ -0.82
PKNOX1-204ENST00000456957 IGLV7-43P04211 117 aa9.92□□□□□ -0.82
PKNOX1-204ENST00000456957 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
PKNOX1-204ENST00000456957 K7ERJ3 54 aa9.91□□□□□ -0.82
PKNOX1-204ENST00000456957 ZNF73O43830 326 aaPredicted RBP9.91□□□□□ -0.82
PKNOX1-204ENST00000456957 CBY1Q9Y3M2 126 aa9.91□□□□□ -0.82
PKNOX1-204ENST00000456957 A0A1B0GWB2 263 aa9.9□□□□□ -0.82
PKNOX1-204ENST00000456957 FAM19A1Q7Z5A9 133 aa9.9□□□□□ -0.82
PKNOX1-204ENST00000456957 VPS13BQ7Z7G8 4022 aa9.9□□□□□ -0.82
PKNOX1-204ENST00000456957 PRLHP81277 87 aa9.89□□□□□ -0.83
PKNOX1-204ENST00000456957 SMIM11BQ8TCY0 68 aa9.89□□□□□ -0.83
PKNOX1-204ENST00000456957 PRO1854Q9UHT4 67 aa9.89□□□□□ -0.83
PKNOX1-204ENST00000456957 ETDCA0A1B0GVM5 59 aa9.88□□□□□ -0.83
PKNOX1-204ENST00000456957 H7C2G1 150 aa9.88□□□□□ -0.83
PKNOX1-204ENST00000456957 KRTAP13-1Q8IUC0 172 aa9.88□□□□□ -0.83
PKNOX1-204ENST00000456957 DIRC1Q969H9 104 aa9.88□□□□□ -0.83
PKNOX1-204ENST00000456957 UBE2AP49459 152 aa9.87□□□□□ -0.83
PKNOX1-204ENST00000456957 C6orf99Q4VX62 202 aa9.87□□□□□ -0.83
PKNOX1-204ENST00000456957 B5MCH6 92 aa9.86□□□□□ -0.83
PKNOX1-204ENST00000456957 ZNF861PO60384 105 aa9.86□□□□□ -0.83
PKNOX1-204ENST00000456957 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
PKNOX1-204ENST00000456957 PCP4L1A6NKN8 68 aa9.84□□□□□ -0.83
PKNOX1-204ENST00000456957 H0Y9J4 135 aa9.84□□□□□ -0.83
PKNOX1-204ENST00000456957 BATFQ16520 125 aa9.84□□□□□ -0.83
PKNOX1-204ENST00000456957 Q6ZRX8 168 aa9.84□□□□□ -0.83
PKNOX1-204ENST00000456957 Q1RN00 199 aa9.83□□□□□ -0.84
PKNOX1-204ENST00000456957 SRRM2Q9UQ35 2752 aaKnown RBP9.83□□□□□ -0.84
PKNOX1-204ENST00000456957 TRBV7-6A0A0J9YX20 115 aa9.82□□□□□ -0.84
PKNOX1-204ENST00000456957 COX7BP24311 80 aa9.82□□□□□ -0.84
PKNOX1-204ENST00000456957 ELOF1P60002 83 aaKnown RBP9.82□□□□□ -0.84
PKNOX1-204ENST00000456957 SPINK6Q6UWN8 80 aa9.82□□□□□ -0.84
PKNOX1-204ENST00000456957 PKHD1L1Q86WI1 4243 aa9.82□□□□□ -0.84
PKNOX1-204ENST00000456957 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
PKNOX1-204ENST00000456957 TSPAN13O95857 204 aa9.81□□□□□ -0.84
PKNOX1-204ENST00000456957 SMCR5Q8TEV8 140 aa9.81□□□□□ -0.84
PKNOX1-204ENST00000456957 Q9BRP9 147 aa9.81□□□□□ -0.84
PKNOX1-204ENST00000456957 HIGD2AQ9BW72 106 aa9.81□□□□□ -0.84
PKNOX1-204ENST00000456957 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
PKNOX1-204ENST00000456957 TRIAP1O43715 76 aa9.77□□□□□ -0.85
PKNOX1-204ENST00000456957 VAMP3Q15836 100 aa9.77□□□□□ -0.85
PKNOX1-204ENST00000456957 ERC2-IT1O76042 136 aa9.76□□□□□ -0.85
PKNOX1-204ENST00000456957 INAFM2P0DMQ5 153 aa9.76□□□□□ -0.85
PKNOX1-204ENST00000456957 HERC1Q15751 4861 aa9.75□□□□□ -0.85
PKNOX1-204ENST00000456957 PSMB2P49721 201 aa9.75□□□□□ -0.85
PKNOX1-204ENST00000456957 DHRS4-AS1Q9P1J3 65 aa9.75□□□□□ -0.85
PKNOX1-204ENST00000456957 LINC00575Q6W349 94 aa9.73□□□□□ -0.85
PKNOX1-204ENST00000456957 NAA38Q9BRA0 125 aaKnown RBP9.72□□□□□ -0.85
PKNOX1-204ENST00000456957 H0YGX0 51 aa9.71□□□□□ -0.86
PKNOX1-204ENST00000456957 FAM218AQ96MZ4 157 aa9.71□□□□□ -0.86
PKNOX1-204ENST00000456957 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
PKNOX1-204ENST00000456957 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
PKNOX1-204ENST00000456957 ST20-AS1Q8NBB2 130 aa9.7□□□□□ -0.86
PKNOX1-204ENST00000456957 SPRR4Q96PI1 79 aa9.7□□□□□ -0.86
PKNOX1-204ENST00000456957 SLC25A20O43772 301 aa9.69□□□□□ -0.86
PKNOX1-204ENST00000456957 COX6CP09669 75 aa9.69□□□□□ -0.86
PKNOX1-204ENST00000456957 CLEC2BQ92478 149 aa9.69□□□□□ -0.86
PKNOX1-204ENST00000456957 ZNF706Q9Y5V0 76 aaPredicted RBP9.69□□□□□ -0.86
PKNOX1-204ENST00000456957 hADV29S1A0JD25 119 aa9.68□□□□□ -0.86
PKNOX1-204ENST00000456957 ANAPC11Q9NYG5 84 aa9.67□□□□□ -0.86
PKNOX1-204ENST00000456957 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
PKNOX1-204ENST00000456957 C9orf118A6NHY6 69 aa9.66□□□□□ -0.86
PKNOX1-204ENST00000456957 H3BUT2 72 aa9.66□□□□□ -0.86
PKNOX1-204ENST00000456957 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
PKNOX1-204ENST00000456957 COL5A1-AS1Q5SY13 56 aa9.66□□□□□ -0.86
PKNOX1-204ENST00000456957 GAGE2AQ6NT46 116 aa9.65□□□□□ -0.86
PKNOX1-204ENST00000456957 LINC00483Q53H64 154 aa9.64□□□□□ -0.87
PKNOX1-204ENST00000456957 Q6ZQY7 126 aa9.64□□□□□ -0.87
PKNOX1-204ENST00000456957 A0A1B0GX51 115 aa9.63□□□□□ -0.87
PKNOX1-204ENST00000456957 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
PKNOX1-204ENST00000456957 LINC01547P58512 204 aaPredicted RBP9.62□□□□□ -0.87
PKNOX1-204ENST00000456957 FAM229BQ4G0N7 80 aa9.62□□□□□ -0.87
PKNOX1-204ENST00000456957 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.62□□□□□ -0.87
PKNOX1-204ENST00000456957 DEFB105AQ8NG35 78 aa9.62□□□□□ -0.87
PKNOX1-204ENST00000456957 LINC01600Q96MT4 127 aa9.62□□□□□ -0.87
PKNOX1-204ENST00000456957 A0A087X002 238 aa9.61□□□□□ -0.87
PKNOX1-204ENST00000456957 LST1O00453 97 aa9.61□□□□□ -0.87
PKNOX1-204ENST00000456957 SNCGO76070 127 aa9.61□□□□□ -0.87
PKNOX1-204ENST00000456957 SPRR1BP22528 89 aa9.61□□□□□ -0.87
PKNOX1-204ENST00000456957 A0A1W2PPM0 123 aa9.6□□□□□ -0.87
PKNOX1-204ENST00000456957 TCL1BO95988 128 aa9.6□□□□□ -0.87
PKNOX1-204ENST00000456957 PRR26Q8N8Z3 221 aa9.6□□□□□ -0.87
PKNOX1-204ENST00000456957 MYCBP2O75592 4640 aa9.6□□□□□ -0.87
PKNOX1-204ENST00000456957 FAT3Q8TDW7 4589 aa9.59□□□□□ -0.87
PKNOX1-204ENST00000456957 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
PKNOX1-204ENST00000456957 OXTP01178 125 aa9.59□□□□□ -0.87
PKNOX1-204ENST00000456957 LYRM7Q5U5X0 104 aa9.59□□□□□ -0.87
PKNOX1-204ENST00000456957 LRP1Q07954 4544 aaKnown RBP9.58□□□□□ -0.88
PKNOX1-204ENST00000456957 CRYGAP11844 174 aa9.58□□□□□ -0.88
PKNOX1-204ENST00000456957 Q8N377 158 aa9.58□□□□□ -0.88
PKNOX1-204ENST00000456957 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
PKNOX1-204ENST00000456957 DNAL4O96015 105 aa9.57□□□□□ -0.88
PKNOX1-204ENST00000456957 TRACP01848 142 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms