RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 Q8N377 158 aa6.6□□□□□ -1.35
SCN5A-210ENST00000455624 PCSK5Q92824 1860 aa6.6□□□□□ -1.35
SCN5A-210ENST00000455624 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
SCN5A-210ENST00000455624 PRR34Q9NV39 138 aa6.59□□□□□ -1.35
SCN5A-210ENST00000455624 IGF2RP11717 2491 aa6.59□□□□□ -1.36
SCN5A-210ENST00000455624 ACANP16112 2415 aa6.58□□□□□ -1.36
SCN5A-210ENST00000455624 PSORS1C2Q9UIG4 136 aa6.58□□□□□ -1.36
SCN5A-210ENST00000455624 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
SCN5A-210ENST00000455624 GOLGB1Q14789 3259 aaKnown RBP6.58□□□□□ -1.36
SCN5A-210ENST00000455624 IGLV5-48A0A075B6I7 105 aa6.57□□□□□ -1.36
SCN5A-210ENST00000455624 Q8N1X5 172 aa6.57□□□□□ -1.36
SCN5A-210ENST00000455624 C9orf163Q8N9P6 203 aa6.56□□□□□ -1.36
SCN5A-210ENST00000455624 ZNF575Q86XF7 245 aa6.56□□□□□ -1.36
SCN5A-210ENST00000455624 FAM104AQ969W3 186 aa6.55□□□□□ -1.36
SCN5A-210ENST00000455624 Q6ZSA8 131 aa6.54□□□□□ -1.36
SCN5A-210ENST00000455624 CASC10Q5T4H9 136 aa6.53□□□□□ -1.36
SCN5A-210ENST00000455624 CNBPP62633 177 aaKnown RBP6.53□□□□□ -1.36
SCN5A-210ENST00000455624 WIPF1O43516 503 aa6.53□□□□□ -1.36
SCN5A-210ENST00000455624 JMJD1CQ15652 2540 aa6.52□□□□□ -1.37
SCN5A-210ENST00000455624 ZFYVE26Q68DK2 2539 aa6.52□□□□□ -1.37
SCN5A-210ENST00000455624 LINC00612Q8N6U2 182 aa6.52□□□□□ -1.37
SCN5A-210ENST00000455624 M0R2T5 61 aa6.51□□□□□ -1.37
SCN5A-210ENST00000455624 GIG44P09565 113 aaPredicted RBP6.5□□□□□ -1.37
SCN5A-210ENST00000455624 PRR26Q8N8Z3 221 aa6.5□□□□□ -1.37
SCN5A-210ENST00000455624 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
SCN5A-210ENST00000455624 A0A096LNT2 108 aa6.48□□□□□ -1.37
SCN5A-210ENST00000455624 EP400Q96L91 3159 aa6.48□□□□□ -1.37
SCN5A-210ENST00000455624 TLN1Q9Y490 2541 aaKnown RBP6.48□□□□□ -1.37
SCN5A-210ENST00000455624 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
SCN5A-210ENST00000455624 LRRK2Q5S007 2527 aa6.47□□□□□ -1.37
SCN5A-210ENST00000455624 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
SCN5A-210ENST00000455624 EIF4EBP3O60516 100 aaPredicted RBP6.46□□□□□ -1.37
SCN5A-210ENST00000455624 TLN2Q9Y4G6 2542 aa6.46□□□□□ -1.37
SCN5A-210ENST00000455624 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
SCN5A-210ENST00000455624 SPANXA2-OT1Q8N9U9 137 aa6.46□□□□□ -1.38
SCN5A-210ENST00000455624 WDR87Q6ZQQ6 2873 aa6.45□□□□□ -1.38
SCN5A-210ENST00000455624 PCNTO95613 3336 aa6.45□□□□□ -1.38
SCN5A-210ENST00000455624 CD164Q04900 197 aa6.45□□□□□ -1.38
SCN5A-210ENST00000455624 LCA10Q71F78 164 aa6.45□□□□□ -1.38
SCN5A-210ENST00000455624 FN1P02751 2386 aaKnown RBP6.45□□□□□ -1.38
SCN5A-210ENST00000455624 LUZP6Q538Z0 58 aa6.45□□□□□ -1.38
SCN5A-210ENST00000455624 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
SCN5A-210ENST00000455624 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
SCN5A-210ENST00000455624 TNP2Q05952 138 aa6.43□□□□□ -1.38
SCN5A-210ENST00000455624 S4R3F8 94 aa6.42□□□□□ -1.38
SCN5A-210ENST00000455624 H7BZZ5 65 aa6.41□□□□□ -1.38
SCN5A-210ENST00000455624 Q5XG85 94 aa6.41□□□□□ -1.38
SCN5A-210ENST00000455624 PIEZO2Q9H5I5 2752 aa6.41□□□□□ -1.38
SCN5A-210ENST00000455624 ABCA12Q86UK0 2595 aa6.41□□□□□ -1.38
SCN5A-210ENST00000455624 HRES1P13985 223 aa6.4□□□□□ -1.39
SCN5A-210ENST00000455624 CHD8Q9HCK8 2581 aa6.39□□□□□ -1.39
SCN5A-210ENST00000455624 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
SCN5A-210ENST00000455624 Q1T7F1 81 aa6.37□□□□□ -1.39
SCN5A-210ENST00000455624 DNAH12Q6ZR08 3092 aa6.37□□□□□ -1.39
SCN5A-210ENST00000455624 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
SCN5A-210ENST00000455624 ZNF462Q96JM2 2506 aa6.36□□□□□ -1.39
SCN5A-210ENST00000455624 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
SCN5A-210ENST00000455624 A0A1B0GU33 70 aa6.35□□□□□ -1.39
SCN5A-210ENST00000455624 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
SCN5A-210ENST00000455624 FAM229BQ4G0N7 80 aa6.33□□□□□ -1.4
SCN5A-210ENST00000455624 UTRNP46939 3433 aa6.33□□□□□ -1.4
SCN5A-210ENST00000455624 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
SCN5A-210ENST00000455624 PKD1L2Q7Z442 2459 aa6.31□□□□□ -1.4
SCN5A-210ENST00000455624 CSAG1Q6PB30 78 aa6.3□□□□□ -1.4
SCN5A-210ENST00000455624 OXTP01178 125 aa6.3□□□□□ -1.4
SCN5A-210ENST00000455624 CENPFP49454 3210 aa6.29□□□□□ -1.4
SCN5A-210ENST00000455624 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
SCN5A-210ENST00000455624 PLAC8Q9NZF1 115 aa6.28□□□□□ -1.4
SCN5A-210ENST00000455624 USP9XQ93008 2570 aaPredicted RBP6.28□□□□□ -1.4
SCN5A-210ENST00000455624 SETD2Q9BYW2 2564 aaPredicted RBP6.27□□□□□ -1.41
SCN5A-210ENST00000455624 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
SCN5A-210ENST00000455624 OCR1Q9BZK8 76 aa6.26□□□□□ -1.41
SCN5A-210ENST00000455624 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
SCN5A-210ENST00000455624 Q75L30 129 aa6.25□□□□□ -1.41
SCN5A-210ENST00000455624 Q5VSD8 79 aa6.24□□□□□ -1.41
SCN5A-210ENST00000455624 A0A0C4DFX4 3053 aa6.23□□□□□ -1.41
SCN5A-210ENST00000455624 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
SCN5A-210ENST00000455624 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.42
SCN5A-210ENST00000455624 Q5W150 140 aa6.2□□□□□ -1.42
SCN5A-210ENST00000455624 R4GN34 69 aa6.2□□□□□ -1.42
SCN5A-210ENST00000455624 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
SCN5A-210ENST00000455624 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
SCN5A-210ENST00000455624 SPTBN4Q9H254 2564 aa6.17□□□□□ -1.42
SCN5A-210ENST00000455624 MTORP42345 2549 aa6.16□□□□□ -1.42
SCN5A-210ENST00000455624 SPINK7P58062 85 aa6.15□□□□□ -1.42
SCN5A-210ENST00000455624 ANKRD11Q6UB99 2663 aaPredicted RBP6.14□□□□□ -1.43
SCN5A-210ENST00000455624 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
SCN5A-210ENST00000455624 FASNP49327 2511 aaKnown RBP6.14□□□□□ -1.43
SCN5A-210ENST00000455624 LCE6AA0A183 80 aa6.14□□□□□ -1.43
SCN5A-210ENST00000455624 USP9YO00507 2555 aaPredicted RBP6.13□□□□□ -1.43
SCN5A-210ENST00000455624 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
SCN5A-210ENST00000455624 CEP295Q9C0D2 2601 aa6.13□□□□□ -1.43
SCN5A-210ENST00000455624 CR1P17927 2039 aa6.12□□□□□ -1.43
SCN5A-210ENST00000455624 M0QZ58 72 aa6.11□□□□□ -1.43
SCN5A-210ENST00000455624 SPRR1AP35321 89 aa6.1□□□□□ -1.43
SCN5A-210ENST00000455624 USP24Q9UPU5 2620 aa6.1□□□□□ -1.43
SCN5A-210ENST00000455624 ROMO1P60602 79 aa6.1□□□□□ -1.43
SCN5A-210ENST00000455624 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
SCN5A-210ENST00000455624 KRTAP10-1P60331 282 aa6.09□□□□□ -1.43
SCN5A-210ENST00000455624 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms