RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 IGKV4-1P06312 121 aa6.49□□□□□ -1.37
LINC01940-201ENST00000455228 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
LINC01940-201ENST00000455228 CSNK1G2-AS1Q8NCQ2 148 aa6.48□□□□□ -1.37
LINC01940-201ENST00000455228 MP68P56378 58 aa6.47□□□□□ -1.37
LINC01940-201ENST00000455228 HIGD2AQ9BW72 106 aa6.47□□□□□ -1.37
LINC01940-201ENST00000455228 C9orf116Q5BN46 136 aaPredicted RBP6.47□□□□□ -1.37
LINC01940-201ENST00000455228 A0A1B0GUV1 79 aa6.46□□□□□ -1.37
LINC01940-201ENST00000455228 ANGP03950 147 aaKnown RBP6.46□□□□□ -1.37
LINC01940-201ENST00000455228 SPANXA2-OT1Q8N9U9 137 aa6.46□□□□□ -1.37
LINC01940-201ENST00000455228 IGLV1-51P01701 117 aa6.46□□□□□ -1.38
LINC01940-201ENST00000455228 NANOS2P60321 138 aaKnown RBP6.46□□□□□ -1.38
LINC01940-201ENST00000455228 COX17Q14061 63 aa6.46□□□□□ -1.38
LINC01940-201ENST00000455228 HAMPP81172 84 aa6.45□□□□□ -1.38
LINC01940-201ENST00000455228 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
LINC01940-201ENST00000455228 PRO0255Q9UI72 69 aa6.45□□□□□ -1.38
LINC01940-201ENST00000455228 CHCHD10Q8WYQ3 142 aaPredicted RBP6.45□□□□□ -1.38
LINC01940-201ENST00000455228 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
LINC01940-201ENST00000455228 ITPR2Q14571 2701 aa6.45□□□□□ -1.38
LINC01940-201ENST00000455228 NBEAL2Q6ZNJ1 2754 aa6.45□□□□□ -1.38
LINC01940-201ENST00000455228 ITPR3Q14573 2671 aa6.44□□□□□ -1.38
LINC01940-201ENST00000455228 LINC01006Q8NI28 216 aa6.44□□□□□ -1.38
LINC01940-201ENST00000455228 FLNAP21333 2647 aaKnown RBP6.44□□□□□ -1.38
LINC01940-201ENST00000455228 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
LINC01940-201ENST00000455228 REG3AQ06141 175 aa6.43□□□□□ -1.38
LINC01940-201ENST00000455228 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
LINC01940-201ENST00000455228 X6R8D5 127 aa6.43□□□□□ -1.38
LINC01940-201ENST00000455228 ZNF843Q8N446 348 aa6.42□□□□□ -1.38
LINC01940-201ENST00000455228 M0R2N4 97 aa6.42□□□□□ -1.38
LINC01940-201ENST00000455228 NDUFB1O75438 58 aa6.42□□□□□ -1.38
LINC01940-201ENST00000455228 CNBPP62633 177 aaKnown RBP6.42□□□□□ -1.38
LINC01940-201ENST00000455228 CELA1Q9UNI1 258 aa6.42□□□□□ -1.38
LINC01940-201ENST00000455228 DEFB4AO15263 64 aa6.41□□□□□ -1.38
LINC01940-201ENST00000455228 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
LINC01940-201ENST00000455228 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
LINC01940-201ENST00000455228 Q6ZQY7 126 aa6.4□□□□□ -1.38
LINC01940-201ENST00000455228 J3QKU1 62 aa6.4□□□□□ -1.39
LINC01940-201ENST00000455228 LINC00612Q8N6U2 182 aa6.4□□□□□ -1.39
LINC01940-201ENST00000455228 HIVEP2P31629 2446 aa6.4□□□□□ -1.39
LINC01940-201ENST00000455228 IGHV4-28A0A0C4DH34 117 aa6.4□□□□□ -1.39
LINC01940-201ENST00000455228 APCP25054 2843 aa6.39□□□□□ -1.39
LINC01940-201ENST00000455228 Q8NDZ9 215 aa6.39□□□□□ -1.39
LINC01940-201ENST00000455228 C10orf25Q5T742 122 aa6.38□□□□□ -1.39
LINC01940-201ENST00000455228 F8P00451 2351 aa6.38□□□□□ -1.39
LINC01940-201ENST00000455228 UBR5O95071 2799 aaPredicted RBP6.38□□□□□ -1.39
LINC01940-201ENST00000455228 HTN3P15516 51 aa6.38□□□□□ -1.39
LINC01940-201ENST00000455228 CYSRT1A8MQ03 144 aa6.38□□□□□ -1.39
LINC01940-201ENST00000455228 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
LINC01940-201ENST00000455228 MUC7Q8TAX7 377 aa6.37□□□□□ -1.39
LINC01940-201ENST00000455228 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
LINC01940-201ENST00000455228 LRCOL1A6NCL2 159 aa6.37□□□□□ -1.39
LINC01940-201ENST00000455228 DEFB135Q30KP9 77 aa6.37□□□□□ -1.39
LINC01940-201ENST00000455228 TENM4Q6N022 2769 aa6.37□□□□□ -1.39
LINC01940-201ENST00000455228 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
LINC01940-201ENST00000455228 XAGE1AQ9HD64 81 aa6.36□□□□□ -1.39
LINC01940-201ENST00000455228 UNC79Q9P2D8 2635 aa6.36□□□□□ -1.39
LINC01940-201ENST00000455228 A0A1B0GW54 56 aa6.36□□□□□ -1.39
LINC01940-201ENST00000455228 RTL8CO15255 209 aa6.36□□□□□ -1.39
LINC01940-201ENST00000455228 KLK12Q9UKR0 248 aa6.36□□□□□ -1.39
LINC01940-201ENST00000455228 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
LINC01940-201ENST00000455228 AKAP9Q99996 3911 aa6.35□□□□□ -1.39
LINC01940-201ENST00000455228 NBPF19A0A087WUL8 3843 aa6.35□□□□□ -1.39
LINC01940-201ENST00000455228 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
LINC01940-201ENST00000455228 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
LINC01940-201ENST00000455228 B9D2Q9BPU9 175 aa6.34□□□□□ -1.39
LINC01940-201ENST00000455228 IGHV4-30-4P0DP06 118 aa6.34□□□□□ -1.4
LINC01940-201ENST00000455228 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.33□□□□□ -1.4
LINC01940-201ENST00000455228 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
LINC01940-201ENST00000455228 A0A0J9YWU9 116 aa6.33□□□□□ -1.4
LINC01940-201ENST00000455228 COX7BP24311 80 aa6.33□□□□□ -1.4
LINC01940-201ENST00000455228 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.32□□□□□ -1.4
LINC01940-201ENST00000455228 ZNF469Q96JG9 3925 aaPredicted RBP6.32□□□□□ -1.4
LINC01940-201ENST00000455228 A6NED7 52 aa6.31□□□□□ -1.4
LINC01940-201ENST00000455228 LELP1Q5T871 98 aa6.31□□□□□ -1.4
LINC01940-201ENST00000455228 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
LINC01940-201ENST00000455228 LINC00208Q96KT6 92 aa6.31□□□□□ -1.4
LINC01940-201ENST00000455228 KMT2BQ9UMN6 2715 aaPredicted RBP6.3□□□□□ -1.4
LINC01940-201ENST00000455228 H3BPC8 53 aa6.3□□□□□ -1.4
LINC01940-201ENST00000455228 CAMK2N2Q96S95 79 aa6.3□□□□□ -1.4
LINC01940-201ENST00000455228 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
LINC01940-201ENST00000455228 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
LINC01940-201ENST00000455228 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
LINC01940-201ENST00000455228 ATRQ13535 2644 aa6.29□□□□□ -1.4
LINC01940-201ENST00000455228 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
LINC01940-201ENST00000455228 SPART-AS1P0CW21 52 aa6.29□□□□□ -1.4
LINC01940-201ENST00000455228 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
LINC01940-201ENST00000455228 GVQW2A0A096LPI5 108 aaPredicted RBP6.27□□□□□ -1.41
LINC01940-201ENST00000455228 PRR34Q9NV39 138 aa6.27□□□□□ -1.41
LINC01940-201ENST00000455228 C9orf163Q8N9P6 203 aa6.26□□□□□ -1.41
LINC01940-201ENST00000455228 Q8N9L7 120 aa6.26□□□□□ -1.41
LINC01940-201ENST00000455228 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
LINC01940-201ENST00000455228 KRTAP10-3P60369 221 aa6.25□□□□□ -1.41
LINC01940-201ENST00000455228 KRTAP1-1Q07627 177 aa6.25□□□□□ -1.41
LINC01940-201ENST00000455228 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
LINC01940-201ENST00000455228 DEFB105AQ8NG35 78 aa6.24□□□□□ -1.41
LINC01940-201ENST00000455228 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
LINC01940-201ENST00000455228 Q8NAQ8 132 aa6.24□□□□□ -1.41
LINC01940-201ENST00000455228 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
LINC01940-201ENST00000455228 EGFEM1PQ0D2K5 195 aa6.23□□□□□ -1.41
LINC01940-201ENST00000455228 VWFP04275 2813 aa6.23□□□□□ -1.41
LINC01940-201ENST00000455228 LINC00528Q8N1L1 170 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms