RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SFT2D2O95562 160 aa1.77□□□□□ -2.13
HMGB1P15-201ENST00000453854 SEC11AP67812 179 aa1.77□□□□□ -2.13
HMGB1P15-201ENST00000453854 BRD3OSQ6XYD6 125 aa1.77□□□□□ -2.13
HMGB1P15-201ENST00000453854 LINC00322Q6ZN03 302 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P15-201ENST00000453854 FAM167A-AS1Q96KT0 104 aa1.77□□□□□ -2.13
HMGB1P15-201ENST00000453854 TRGV9Q99603 122 aa1.77□□□□□ -2.13
HMGB1P15-201ENST00000453854 RABAC1Q9UI14 185 aa1.77□□□□□ -2.13
HMGB1P15-201ENST00000453854 DNAH11Q96DT5 4516 aa1.76□□□□□ -2.13
HMGB1P15-201ENST00000453854 SERP2Q8N6R1 65 aa1.76□□□□□ -2.13
HMGB1P15-201ENST00000453854 LINC00474Q9P2X8 69 aa1.76□□□□□ -2.13
HMGB1P15-201ENST00000453854 CACFD1Q9UGQ2 172 aa1.76□□□□□ -2.13
HMGB1P15-201ENST00000453854 DOCK11Q5JSL3 2073 aa1.76□□□□□ -2.13
HMGB1P15-201ENST00000453854 HSPG2P98160 4391 aa1.76□□□□□ -2.13
HMGB1P15-201ENST00000453854 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 DMBT1Q9UGM3 2413 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 MYCBP2O75592 4640 aa1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 LOC110117498A0A087WWA1 95 aa1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 UQCRHLA0A096LP55 91 aa1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 ELOF1P60002 83 aaKnown RBP1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 PEA15Q15121 130 aa1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 SPATA45Q537H7 98 aa1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 Q6ZRN7 208 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 PPP1R1CQ8WVI7 109 aa1.75□□□□□ -2.13
HMGB1P15-201ENST00000453854 TRBV7-3A0A075B6L6 115 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 K7EIL1 84 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 CYB5AP00167 134 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 SPINT3P49223 89 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 UBE2D3P61077 147 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 RPL37AP61513 92 aaKnown RBP1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 UBE2D2P62837 147 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 DEFB121Q5J5C9 76 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 FAM213BQ8TBF2 198 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 S100A13Q99584 98 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 BPESC1Q9GZL8 116 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 PRO1854Q9UHT4 67 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 LENEPQ9Y5L5 61 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 SNURFQ9Y675 71 aa1.74□□□□□ -2.13
HMGB1P15-201ENST00000453854 KMT2AQ03164 3969 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 TRGV2A0A075B6R0 118 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 SYS1-DBNDD2H3BUS1 97 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 DNAL4O96015 105 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 TFF1P04155 84 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 COX6CP09669 75 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 SNRPFP62306 86 aaKnown RBP1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 SSBP1Q04837 148 aaKnown RBP1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 ZNF56Q15929 161 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 C10orf128Q5T292 105 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 WFDC10AQ9H1F0 79 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 UQCR10Q9UDW1 63 aa1.73□□□□□ -2.13
HMGB1P15-201ENST00000453854 CCL3L1P16619 93 aa1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 FAUP35544 74 aaKnown RBP1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 EFNA4P52798 201 aa1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 FAM74A4Q5TZK3 123 aa1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 Q86TA4 180 aa1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 S100A16Q96FQ6 103 aaKnown RBP1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 ZNF625Q96I27 306 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 FAT2Q9NYQ8 4349 aa1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 DNAH2Q9P225 4427 aa1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 VPS13DQ5THJ4 4388 aa1.72□□□□□ -2.13
HMGB1P15-201ENST00000453854 APOBP04114 4563 aaKnown RBP1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 IGKV2-40A0A087WW87 121 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 LOC285095A0A1B0GVY8 99 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 CLPSL1A2RUU4 121 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 J3QRE1 110 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 IGKV2D-40P01614 121 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 NMBP08949 121 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 GDF5OSQ5U4N7 250 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 XAF1Q6GPH4 301 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 VMO1Q7Z5L0 202 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 C20orf197Q8N268 126 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 C20orf78Q9BR46 151 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 CYSTM1Q9H1C7 97 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 DYNLRB1Q9NP97 96 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 MANBALQ9NQG1 85 aa1.71□□□□□ -2.14
HMGB1P15-201ENST00000453854 NBDYA0A0U1RRE5 68 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 BCE1O60756 84 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 TRAPPC2P0DI81 140 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 TRAPPC2BP0DI82 140 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 EDDM3BP56851 147 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 Q5VV11 94 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 Q8N6K4 173 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 AMELXQ99217 191 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 NDUFA4L2Q9NRX3 87 aa1.7□□□□□ -2.14
HMGB1P15-201ENST00000453854 RNF213Q63HN8 5207 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 TRBV6-7A0A0A0MS04 114 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 TRAV22A0A0B4J277 110 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 IGKV3D-7A0A0C4DH55 119 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 IGKV3OR2-268A0A0C4DH90 116 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 LOC101927531A0A1B0GV80 90 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 IGLC7A0M8Q6 106 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 H0YGG7 62 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 H7BZZ5 65 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 APOC3P02656 99 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 KLKP1Q107X0 134 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 FXYD3Q14802 87 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 UNQ6190/PRO20217Q6UXQ8 127 aa1.69□□□□□ -2.14
HMGB1P15-201ENST00000453854 COX7B2Q8TF08 81 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms