RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 DIRC1Q969H9 104 aa7.85□□□□□ -1.15
HLA-DPA1-244ENST00000453337 NAA38Q9BRA0 125 aaKnown RBP7.85□□□□□ -1.15
HLA-DPA1-244ENST00000453337 TRBV7-6A0A0J9YX20 115 aa7.84□□□□□ -1.15
HLA-DPA1-244ENST00000453337 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
HLA-DPA1-244ENST00000453337 FABP2P12104 132 aa7.84□□□□□ -1.15
HLA-DPA1-244ENST00000453337 C6orf99Q4VX62 202 aa7.84□□□□□ -1.15
HLA-DPA1-244ENST00000453337 REG3GQ6UW15 175 aa7.84□□□□□ -1.15
HLA-DPA1-244ENST00000453337 SCXQ7RTU7 201 aa7.84□□□□□ -1.15
HLA-DPA1-244ENST00000453337 SPRR1AP35321 89 aa7.82□□□□□ -1.16
HLA-DPA1-244ENST00000453337 TRBV20-1A0A075B6N2 111 aa7.81□□□□□ -1.16
HLA-DPA1-244ENST00000453337 ETDCA0A1B0GVM5 59 aa7.81□□□□□ -1.16
HLA-DPA1-244ENST00000453337 SNCGO76070 127 aa7.81□□□□□ -1.16
HLA-DPA1-244ENST00000453337 COX7BP24311 80 aa7.81□□□□□ -1.16
HLA-DPA1-244ENST00000453337 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
HLA-DPA1-244ENST00000453337 SLC25A20O43772 301 aa7.78□□□□□ -1.16
HLA-DPA1-244ENST00000453337 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
HLA-DPA1-244ENST00000453337 XGP55808 180 aa7.78□□□□□ -1.16
HLA-DPA1-244ENST00000453337 ELOF1P60002 83 aaKnown RBP7.78□□□□□ -1.16
HLA-DPA1-244ENST00000453337 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
HLA-DPA1-244ENST00000453337 DNAH5Q8TE73 4624 aa7.78□□□□□ -1.16
HLA-DPA1-244ENST00000453337 A0A1B0GX51 115 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 B5MCH6 92 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 BCE1O60756 84 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 ATXN8Q156A1 80 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 FAM19A1Q7Z5A9 133 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 CLEC2BQ92478 149 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 PSORS1C2Q9UIG4 136 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 SPCS1Q9Y6A9 102 aa7.77□□□□□ -1.17
HLA-DPA1-244ENST00000453337 H0Y9J4 135 aa7.76□□□□□ -1.17
HLA-DPA1-244ENST00000453337 HAMPP81172 84 aa7.76□□□□□ -1.17
HLA-DPA1-244ENST00000453337 Q6ZRX8 168 aa7.76□□□□□ -1.17
HLA-DPA1-244ENST00000453337 LINC00528Q8N1L1 170 aa7.76□□□□□ -1.17
HLA-DPA1-244ENST00000453337 DNAH8Q96JB1 4490 aa7.76□□□□□ -1.17
HLA-DPA1-244ENST00000453337 A0A1B0GV90 55 aa7.75□□□□□ -1.17
HLA-DPA1-244ENST00000453337 hADV29S1A0JD25 119 aa7.75□□□□□ -1.17
HLA-DPA1-244ENST00000453337 TCL1BO95988 128 aa7.75□□□□□ -1.17
HLA-DPA1-244ENST00000453337 DHRS4-AS1Q9P1J3 65 aa7.75□□□□□ -1.17
HLA-DPA1-244ENST00000453337 LST1O00453 97 aa7.74□□□□□ -1.17
HLA-DPA1-244ENST00000453337 TRACP01848 142 aa7.74□□□□□ -1.17
HLA-DPA1-244ENST00000453337 UBE2AP49459 152 aa7.74□□□□□ -1.17
HLA-DPA1-244ENST00000453337 C1orf137Q5JT78 98 aa7.74□□□□□ -1.17
HLA-DPA1-244ENST00000453337 K7EP34 96 aa7.73□□□□□ -1.17
HLA-DPA1-244ENST00000453337 FAM218AQ96MZ4 157 aa7.73□□□□□ -1.17
HLA-DPA1-244ENST00000453337 CDK2AP2O75956 126 aa7.72□□□□□ -1.17
HLA-DPA1-244ENST00000453337 DNAL4O96015 105 aa7.72□□□□□ -1.17
HLA-DPA1-244ENST00000453337 RYR3Q15413 4870 aa7.72□□□□□ -1.17
HLA-DPA1-244ENST00000453337 H3BMG7 143 aa7.71□□□□□ -1.18
HLA-DPA1-244ENST00000453337 GHRHP01286 108 aa7.71□□□□□ -1.18
HLA-DPA1-244ENST00000453337 PRLHP81277 87 aa7.71□□□□□ -1.18
HLA-DPA1-244ENST00000453337 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
HLA-DPA1-244ENST00000453337 ZNF861PO60384 105 aa7.7□□□□□ -1.18
HLA-DPA1-244ENST00000453337 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
HLA-DPA1-244ENST00000453337 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.7□□□□□ -1.18
HLA-DPA1-244ENST00000453337 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
HLA-DPA1-244ENST00000453337 Q9BRP9 147 aa7.7□□□□□ -1.18
HLA-DPA1-244ENST00000453337 H3BQ85 93 aa7.69□□□□□ -1.18
HLA-DPA1-244ENST00000453337 UBE2V1Q13404 147 aa7.69□□□□□ -1.18
HLA-DPA1-244ENST00000453337 OCIAD2Q56VL3 154 aa7.69□□□□□ -1.18
HLA-DPA1-244ENST00000453337 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
HLA-DPA1-244ENST00000453337 HIGD2AQ9BW72 106 aa7.69□□□□□ -1.18
HLA-DPA1-244ENST00000453337 SMR3BP02814 79 aaPredicted RBP7.68□□□□□ -1.18
HLA-DPA1-244ENST00000453337 LRP1BQ9NZR2 4599 aa7.68□□□□□ -1.18
HLA-DPA1-244ENST00000453337 C9JAW5 83 aa7.67□□□□□ -1.18
HLA-DPA1-244ENST00000453337 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
HLA-DPA1-244ENST00000453337 Q6ZQY7 126 aa7.67□□□□□ -1.18
HLA-DPA1-244ENST00000453337 ORMDL1Q9P0S3 153 aa7.67□□□□□ -1.18
HLA-DPA1-244ENST00000453337 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
HLA-DPA1-244ENST00000453337 BAALC-AS2P0C853 105 aa7.66□□□□□ -1.18
HLA-DPA1-244ENST00000453337 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
HLA-DPA1-244ENST00000453337 TMEM256-PLSCR3K7ERE1 68 aa7.65□□□□□ -1.18
HLA-DPA1-244ENST00000453337 ERC2-IT1O76042 136 aa7.65□□□□□ -1.18
HLA-DPA1-244ENST00000453337 F8W1H4 67 aa7.64□□□□□ -1.19
HLA-DPA1-244ENST00000453337 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
HLA-DPA1-244ENST00000453337 H3BT86 120 aa7.63□□□□□ -1.19
HLA-DPA1-244ENST00000453337 PLA2G1BP04054 148 aaKnown RBP7.63□□□□□ -1.19
HLA-DPA1-244ENST00000453337 DEFB105AQ8NG35 78 aa7.63□□□□□ -1.19
HLA-DPA1-244ENST00000453337 ZNF706Q9Y5V0 76 aaPredicted RBP7.63□□□□□ -1.19
HLA-DPA1-244ENST00000453337 TEX49A0A1B0GTD5 131 aa7.62□□□□□ -1.19
HLA-DPA1-244ENST00000453337 ANKRD29Q8N6D5 301 aa7.62□□□□□ -1.19
HLA-DPA1-244ENST00000453337 ST20-AS1Q8NBB2 130 aa7.62□□□□□ -1.19
HLA-DPA1-244ENST00000453337 IGLV5-48A0A075B6I7 105 aa7.61□□□□□ -1.19
HLA-DPA1-244ENST00000453337 LINC01600Q96MT4 127 aa7.61□□□□□ -1.19
HLA-DPA1-244ENST00000453337 PRO0461Q9UI25 63 aa7.61□□□□□ -1.19
HLA-DPA1-244ENST00000453337 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
HLA-DPA1-244ENST00000453337 MTURNQ8N3F0 131 aa7.6□□□□□ -1.19
HLA-DPA1-244ENST00000453337 LINC01547P58512 204 aaPredicted RBP7.59□□□□□ -1.19
HLA-DPA1-244ENST00000453337 Q8N377 158 aa7.59□□□□□ -1.19
HLA-DPA1-244ENST00000453337 SPRR1BP22528 89 aa7.58□□□□□ -1.2
HLA-DPA1-244ENST00000453337 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
HLA-DPA1-244ENST00000453337 GAGE2AQ6NT46 116 aa7.58□□□□□ -1.2
HLA-DPA1-244ENST00000453337 SPRR4Q96PI1 79 aa7.58□□□□□ -1.2
HLA-DPA1-244ENST00000453337 APOBP04114 4563 aaKnown RBP7.57□□□□□ -1.2
HLA-DPA1-244ENST00000453337 LAMTOR3Q9UHA4 124 aa7.57□□□□□ -1.2
HLA-DPA1-244ENST00000453337 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
HLA-DPA1-244ENST00000453337 NDUFV3P56181 108 aaKnown RBP7.56□□□□□ -1.2
HLA-DPA1-244ENST00000453337 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
HLA-DPA1-244ENST00000453337 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
HLA-DPA1-244ENST00000453337 Q8N1X5 172 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms