RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.17□□□□□ -1.9
EPHA3-202ENST00000452448 CFAP47Q6ZTR5 3102 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 TEX15Q9BXT5 2789 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 A6NDX4 124 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 A8MUU9 505 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 IGHV3-23P01764 117 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 Q8N9W7 124 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 ST20-AS1Q8NBB2 130 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 DEFB104AQ8WTQ1 72 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
EPHA3-202ENST00000452448 TRBV6-4A0A1B0GX49 114 aa3.15□□□□□ -1.91
EPHA3-202ENST00000452448 PIEZO2Q9H5I5 2752 aa3.15□□□□□ -1.91
EPHA3-202ENST00000452448 A0A087WSZ3 146 aa3.15□□□□□ -1.91
EPHA3-202ENST00000452448 LYNX1G3V0Z9 82 aa3.15□□□□□ -1.91
EPHA3-202ENST00000452448 LYNX1P0DP58 116 aa3.15□□□□□ -1.91
EPHA3-202ENST00000452448 POLR2KP53803 58 aaKnown RBP3.15□□□□□ -1.91
EPHA3-202ENST00000452448 LAMA1P25391 3075 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 IGLV10-54A0A075B6I4 117 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 IGKV2-28A0A075B6P5 120 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 IGKV2D-28P01615 120 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 CHCHD7Q9BUK0 85 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 CFAP46Q8IYW2 2715 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 CCL18P55774 89 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 DEFB114Q30KQ6 69 aa3.14□□□□□ -1.91
EPHA3-202ENST00000452448 H3BUA1 57 aa3.13□□□□□ -1.91
EPHA3-202ENST00000452448 USP9YO00507 2555 aaPredicted RBP3.13□□□□□ -1.91
EPHA3-202ENST00000452448 NOTCH2Q04721 2471 aa3.13□□□□□ -1.91
EPHA3-202ENST00000452448 DSPP15924 2871 aaKnown RBP3.13□□□□□ -1.91
EPHA3-202ENST00000452448 IGHV3-66A0A0C4DH42 116 aa3.13□□□□□ -1.91
EPHA3-202ENST00000452448 KCNQ1DNQ9H478 68 aa3.13□□□□□ -1.91
EPHA3-202ENST00000452448 AKAP13Q12802 2813 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 ZNF861PO60384 105 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 LINC00158P58513 81 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 NAV3Q8IVL0 2385 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 IGKV3-7A0A075B6H7 116 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 H3BPC8 53 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 C1orf137Q5JT78 98 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 C9orf163Q8N9P6 203 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 USMG5Q96IX5 58 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 SPRR4Q96PI1 79 aa3.12□□□□□ -1.91
EPHA3-202ENST00000452448 IGKV3OR2-268A0A0C4DH90 116 aa3.11□□□□□ -1.91
EPHA3-202ENST00000452448 C5orf56Q8N8D9 126 aa3.11□□□□□ -1.91
EPHA3-202ENST00000452448 WDFY4Q6ZS81 3184 aa3.11□□□□□ -1.91
EPHA3-202ENST00000452448 IGLV1-50A0A075B6I6 118 aa3.11□□□□□ -1.91
EPHA3-202ENST00000452448 F8P00451 2351 aa3.1□□□□□ -1.91
EPHA3-202ENST00000452448 NUPR2A6NF83 97 aa3.1□□□□□ -1.91
EPHA3-202ENST00000452448 PRR9Q5T870 116 aa3.1□□□□□ -1.91
EPHA3-202ENST00000452448 KRTAP26-1Q6PEX3 210 aa3.1□□□□□ -1.91
EPHA3-202ENST00000452448 DMAC1Q96GE9 116 aa3.1□□□□□ -1.91
EPHA3-202ENST00000452448 SPEGQ15772 3267 aa3.1□□□□□ -1.91
EPHA3-202ENST00000452448 G3V318 75 aa3.1□□□□□ -1.91
EPHA3-202ENST00000452448 TRIOO75962 3097 aa3.09□□□□□ -1.91
EPHA3-202ENST00000452448 WDFY3Q8IZQ1 3526 aa3.09□□□□□ -1.91
EPHA3-202ENST00000452448 UQCR11O14957 56 aa3.09□□□□□ -1.91
EPHA3-202ENST00000452448 LINC00315P59091 139 aa3.09□□□□□ -1.91
EPHA3-202ENST00000452448 KRTAP4-5Q9BYR2 181 aa3.09□□□□□ -1.91
EPHA3-202ENST00000452448 CDKN2A-AS1Q9UH64 79 aa3.09□□□□□ -1.91
EPHA3-202ENST00000452448 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.92
EPHA3-202ENST00000452448 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.92
EPHA3-202ENST00000452448 LRRK2Q5S007 2527 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 ICE1Q9Y2F5 2266 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 MYO15AQ9UKN7 3530 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 H3BQ85 93 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 ZZEF1O43149 2961 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 IGLV7-46A0A075B6I9 117 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 RHPN1-AS1Q9BWJ2 59 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
EPHA3-202ENST00000452448 INSP01308 110 aa3.07□□□□□ -1.92
EPHA3-202ENST00000452448 COX7BP24311 80 aa3.07□□□□□ -1.92
EPHA3-202ENST00000452448 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
EPHA3-202ENST00000452448 A0A096LNT2 108 aa3.07□□□□□ -1.92
EPHA3-202ENST00000452448 NBEAQ8NFP9 2946 aa3.06□□□□□ -1.92
EPHA3-202ENST00000452448 M0QY20 66 aa3.06□□□□□ -1.92
EPHA3-202ENST00000452448 Q5W150 140 aa3.06□□□□□ -1.92
EPHA3-202ENST00000452448 PANO1I0J062 215 aa3.05□□□□□ -1.92
EPHA3-202ENST00000452448 FRYQ5TBA9 3013 aa3.05□□□□□ -1.92
EPHA3-202ENST00000452448 FREM2Q5SZK8 3169 aa3.05□□□□□ -1.92
EPHA3-202ENST00000452448 A0A1B0GU69 56 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 LINC00575Q6W349 94 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 LINC00472Q9H8W2 130 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 KLK12Q9UKR0 248 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 ITPR3Q14573 2671 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 SPTBN1Q01082 2364 aaKnown RBP3.04□□□□□ -1.92
EPHA3-202ENST00000452448 POLQO75417 2590 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
EPHA3-202ENST00000452448 A0A087WTM6 91 aa3.03□□□□□ -1.92
EPHA3-202ENST00000452448 Q6ZQY7 126 aa3.03□□□□□ -1.92
EPHA3-202ENST00000452448 H3BUX3 64 aa3.03□□□□□ -1.92
EPHA3-202ENST00000452448 DEFB1P60022 68 aa3.03□□□□□ -1.92
EPHA3-202ENST00000452448 KALRNO60229 2985 aa3.03□□□□□ -1.93
EPHA3-202ENST00000452448 A0A1W2PPR1 153 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 COX6A2Q02221 97 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 Q8N377 158 aa3.02□□□□□ -1.93
EPHA3-202ENST00000452448 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms