RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 LYNX1P0DP58 116 aa1.49□□□□□ -2.17
SSXP4-201ENST00000451349 LMO7Q8WWI1 1683 aa1.48□□□□□ -2.17
SSXP4-201ENST00000451349 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
SSXP4-201ENST00000451349 SMIM2Q9BVW6 85 aa1.48□□□□□ -2.17
SSXP4-201ENST00000451349 CNFNQ9BYD5 112 aa1.48□□□□□ -2.17
SSXP4-201ENST00000451349 PRO3102Q9H379 93 aa1.48□□□□□ -2.17
SSXP4-201ENST00000451349 C4BP0C0L5 1744 aa1.48□□□□□ -2.17
SSXP4-201ENST00000451349 MED13LQ71F56 2210 aa1.47□□□□□ -2.17
SSXP4-201ENST00000451349 KRTAP12-1P59990 96 aa1.46□□□□□ -2.18
SSXP4-201ENST00000451349 CLTCL1P53675 1640 aa1.46□□□□□ -2.18
SSXP4-201ENST00000451349 F5P12259 2224 aa1.46□□□□□ -2.18
SSXP4-201ENST00000451349 GCC2Q8IWJ2 1684 aa1.45□□□□□ -2.18
SSXP4-201ENST00000451349 MINOS1Q5TGZ0 78 aa1.45□□□□□ -2.18
SSXP4-201ENST00000451349 LCE3DQ9BYE3 92 aa1.45□□□□□ -2.18
SSXP4-201ENST00000451349 NDUFA1O15239 70 aa1.44□□□□□ -2.18
SSXP4-201ENST00000451349 COX6A2Q02221 97 aa1.44□□□□□ -2.18
SSXP4-201ENST00000451349 TNCP24821 2201 aa1.44□□□□□ -2.18
SSXP4-201ENST00000451349 CACNA1CQ13936 2221 aa1.44□□□□□ -2.18
SSXP4-201ENST00000451349 LOC730098B7Z3J9 87 aa1.43□□□□□ -2.18
SSXP4-201ENST00000451349 TFF3Q07654 80 aa1.43□□□□□ -2.18
SSXP4-201ENST00000451349 ICE1Q9Y2F5 2266 aa1.43□□□□□ -2.18
SSXP4-201ENST00000451349 SPINK9Q5DT21 86 aa1.42□□□□□ -2.18
SSXP4-201ENST00000451349 C6orf48Q9UBA6 75 aa1.42□□□□□ -2.18
SSXP4-201ENST00000451349 TECTAO75443 2155 aa1.42□□□□□ -2.18
SSXP4-201ENST00000451349 PRO0255Q9UI72 69 aa1.41□□□□□ -2.18
SSXP4-201ENST00000451349 H0YAA0 97 aa1.4□□□□□ -2.19
SSXP4-201ENST00000451349 PRB3Q04118 309 aaPredicted RBP1.4□□□□□ -2.19
SSXP4-201ENST00000451349 KRTAP10-10P60014 251 aa1.39□□□□□ -2.19
SSXP4-201ENST00000451349 ABCA1O95477 2261 aa1.38□□□□□ -2.19
SSXP4-201ENST00000451349 Q5VSD8 79 aa1.37□□□□□ -2.19
SSXP4-201ENST00000451349 KRTAP13-1Q8IUC0 172 aa1.37□□□□□ -2.19
SSXP4-201ENST00000451349 C10orf95Q9H7T3 257 aa1.37□□□□□ -2.19
SSXP4-201ENST00000451349 IAPPP10997 89 aa1.36□□□□□ -2.19
SSXP4-201ENST00000451349 SPRR1AP35321 89 aa1.36□□□□□ -2.19
SSXP4-201ENST00000451349 CACNA1BQ00975 2339 aa1.36□□□□□ -2.19
SSXP4-201ENST00000451349 Q6ZSA8 131 aa1.36□□□□□ -2.19
SSXP4-201ENST00000451349 APLNQ9ULZ1 77 aa1.36□□□□□ -2.19
SSXP4-201ENST00000451349 CADP27708 2225 aa1.36□□□□□ -2.19
SSXP4-201ENST00000451349 J3QKU1 62 aa1.35□□□□□ -2.19
SSXP4-201ENST00000451349 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
SSXP4-201ENST00000451349 WFDC13Q8IUB5 93 aa1.35□□□□□ -2.19
SSXP4-201ENST00000451349 DEFB105AQ8NG35 78 aa1.35□□□□□ -2.19
SSXP4-201ENST00000451349 RPS27P42677 84 aaKnown RBP1.34□□□□□ -2.19
SSXP4-201ENST00000451349 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SSXP4-201ENST00000451349 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
SSXP4-201ENST00000451349 LELP1Q5T871 98 aa1.34□□□□□ -2.19
SSXP4-201ENST00000451349 RPS27LQ71UM5 84 aaKnown RBP1.34□□□□□ -2.19
SSXP4-201ENST00000451349 KRTAP12-4P60329 112 aa1.33□□□□□ -2.2
SSXP4-201ENST00000451349 URB1O60287 2271 aaKnown RBP1.33□□□□□ -2.2
SSXP4-201ENST00000451349 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
SSXP4-201ENST00000451349 ASCC3Q8N3C0 2202 aaKnown RBP1.32□□□□□ -2.2
SSXP4-201ENST00000451349 DEFB130BP0DP73 79 aa1.32□□□□□ -2.2
SSXP4-201ENST00000451349 DEFB130AP0DP74 79 aa1.32□□□□□ -2.2
SSXP4-201ENST00000451349 WFDC10BQ8IUB3 73 aa1.32□□□□□ -2.2
SSXP4-201ENST00000451349 BPTFQ12830 3046 aa1.32□□□□□ -2.2
SSXP4-201ENST00000451349 ASXL3Q9C0F0 2248 aa1.31□□□□□ -2.2
SSXP4-201ENST00000451349 H3BUA1 57 aa1.31□□□□□ -2.2
SSXP4-201ENST00000451349 SPRR1BP22528 89 aa1.31□□□□□ -2.2
SSXP4-201ENST00000451349 BAHCC1Q9P281 2608 aa1.31□□□□□ -2.2
SSXP4-201ENST00000451349 HIVEP2P31629 2446 aa1.3□□□□□ -2.2
SSXP4-201ENST00000451349 IGLV5-48A0A075B6I7 105 aa1.3□□□□□ -2.2
SSXP4-201ENST00000451349 WT1-ASQ06250 92 aa1.3□□□□□ -2.2
SSXP4-201ENST00000451349 ARHGAP5-AS1Q96IT6 56 aa1.3□□□□□ -2.2
SSXP4-201ENST00000451349 ALMS1Q8TCU4 4167 aa1.3□□□□□ -2.2
SSXP4-201ENST00000451349 DEFB131AP59861 70 aa1.29□□□□□ -2.2
SSXP4-201ENST00000451349 CACNA1GO43497 2377 aa1.29□□□□□ -2.2
SSXP4-201ENST00000451349 KNTC1P50748 2209 aa1.28□□□□□ -2.2
SSXP4-201ENST00000451349 A0A0D9SG42 100 aa1.28□□□□□ -2.2
SSXP4-201ENST00000451349 POLR2KP53803 58 aaKnown RBP1.28□□□□□ -2.2
SSXP4-201ENST00000451349 KAAG1Q9UBP8 84 aa1.28□□□□□ -2.2
SSXP4-201ENST00000451349 CNTRLQ7Z7A1 2325 aa1.27□□□□□ -2.21
SSXP4-201ENST00000451349 KRTAP21-3Q3LHN1 58 aa1.26□□□□□ -2.21
SSXP4-201ENST00000451349 ANKRD17O75179 2603 aaKnown RBP1.25□□□□□ -2.21
SSXP4-201ENST00000451349 FLG2Q5D862 2391 aaPredicted RBP1.25□□□□□ -2.21
SSXP4-201ENST00000451349 CACNA1EQ15878 2313 aa1.24□□□□□ -2.21
SSXP4-201ENST00000451349 RPL39P62891 51 aaKnown RBP1.24□□□□□ -2.21
SSXP4-201ENST00000451349 KLK9Q2XQG4 91 aa1.24□□□□□ -2.21
SSXP4-201ENST00000451349 GOLGA4Q13439 2230 aaKnown RBP1.23□□□□□ -2.21
SSXP4-201ENST00000451349 MMP24-AS1A0A0U1RRL7 71 aa1.23□□□□□ -2.21
SSXP4-201ENST00000451349 FBN1P35555 2871 aaKnown RBP1.23□□□□□ -2.21
SSXP4-201ENST00000451349 PRLHP81277 87 aa1.22□□□□□ -2.21
SSXP4-201ENST00000451349 DEFB109BQ30KR1 87 aa1.22□□□□□ -2.21
SSXP4-201ENST00000451349 AHCTF1Q8WYP5 2266 aa1.22□□□□□ -2.21
SSXP4-201ENST00000451349 FAM208BQ5VWN6 2430 aa1.21□□□□□ -2.22
SSXP4-201ENST00000451349 RPL39LQ96EH5 51 aaKnown RBP1.21□□□□□ -2.22
SSXP4-201ENST00000451349 S4R3F8 94 aa1.21□□□□□ -2.22
SSXP4-201ENST00000451349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.21□□□□□ -2.22
SSXP4-201ENST00000451349 LINC01590Q5TEZ4 76 aa1.2□□□□□ -2.22
SSXP4-201ENST00000451349 TTTY10Q9BZA0 68 aa1.2□□□□□ -2.22
SSXP4-201ENST00000451349 NOP10Q9NPE3 64 aaKnown RBP1.2□□□□□ -2.22
SSXP4-201ENST00000451349 KRTAP12-3P60328 96 aa1.18□□□□□ -2.22
SSXP4-201ENST00000451349 DEFB106AQ8N104 65 aa1.18□□□□□ -2.22
SSXP4-201ENST00000451349 CNOT1A5YKK6 2376 aaKnown RBP1.18□□□□□ -2.22
SSXP4-201ENST00000451349 OTOGLQ3ZCN5 2332 aa1.17□□□□□ -2.22
SSXP4-201ENST00000451349 SORL1Q92673 2214 aa1.17□□□□□ -2.22
SSXP4-201ENST00000451349 KRTAP10-4P60372 401 aaPredicted RBP1.16□□□□□ -2.22
SSXP4-201ENST00000451349 NAV3Q8IVL0 2385 aa1.16□□□□□ -2.22
SSXP4-201ENST00000451349 JMJD1CQ15652 2540 aa1.16□□□□□ -2.22
SSXP4-201ENST00000451349 LEAP2Q969E1 77 aa1.15□□□□□ -2.23
SSXP4-201ENST00000451349 CRCT1Q9UGL9 99 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms