RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
UBE3B-204ENST00000449510 UBE2DNLQ8IWF7 75 aa8.4□□□□□ -1.06
UBE3B-204ENST00000449510 INAFM1C9JVW0 142 aa8.4□□□□□ -1.06
UBE3B-204ENST00000449510 H3BQ85 93 aa8.4□□□□□ -1.06
UBE3B-204ENST00000449510 ESRGQ1W209 222 aa8.4□□□□□ -1.06
UBE3B-204ENST00000449510 DEFB131BA0A096LNP1 70 aa8.39□□□□□ -1.07
UBE3B-204ENST00000449510 CXCL6P80162 114 aa8.39□□□□□ -1.07
UBE3B-204ENST00000449510 Q6ZTC4 211 aa8.38□□□□□ -1.07
UBE3B-204ENST00000449510 CHKB-CPT1BH3BT56 60 aa8.38□□□□□ -1.07
UBE3B-204ENST00000449510 IGHV4-30-4P0DP06 118 aa8.38□□□□□ -1.07
UBE3B-204ENST00000449510 Q8NDZ9 215 aa8.38□□□□□ -1.07
UBE3B-204ENST00000449510 LY6G6DO95868 133 aa8.38□□□□□ -1.07
UBE3B-204ENST00000449510 X6R8D5 127 aa8.38□□□□□ -1.07
UBE3B-204ENST00000449510 CDK2AP2O75956 126 aa8.36□□□□□ -1.07
UBE3B-204ENST00000449510 PMAIP1Q13794 54 aa8.36□□□□□ -1.07
UBE3B-204ENST00000449510 STAB1Q9NY15 2570 aa8.36□□□□□ -1.07
UBE3B-204ENST00000449510 NSD1Q96L73 2696 aaPredicted RBP8.36□□□□□ -1.07
UBE3B-204ENST00000449510 LYPD5Q6UWN5 251 aa8.36□□□□□ -1.07
UBE3B-204ENST00000449510 ST20-AS1Q8NBB2 130 aa8.36□□□□□ -1.07
UBE3B-204ENST00000449510 EGFEM1PQ0D2K5 195 aa8.35□□□□□ -1.07
UBE3B-204ENST00000449510 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
UBE3B-204ENST00000449510 Q5XG85 94 aa8.35□□□□□ -1.07
UBE3B-204ENST00000449510 A0A087WSZ3 146 aa8.35□□□□□ -1.07
UBE3B-204ENST00000449510 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
UBE3B-204ENST00000449510 C11orf45Q8TAV5 145 aa8.34□□□□□ -1.07
UBE3B-204ENST00000449510 UBE2AP49459 152 aa8.33□□□□□ -1.08
UBE3B-204ENST00000449510 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
UBE3B-204ENST00000449510 LOC110117498A0A087WWA1 95 aa8.33□□□□□ -1.08
UBE3B-204ENST00000449510 A6NED7 52 aa8.33□□□□□ -1.08
UBE3B-204ENST00000449510 KLKP1Q107X0 134 aa8.32□□□□□ -1.08
UBE3B-204ENST00000449510 IL17DQ8TAD2 202 aa8.32□□□□□ -1.08
UBE3B-204ENST00000449510 PRLHP81277 87 aa8.32□□□□□ -1.08
UBE3B-204ENST00000449510 PCOTHQ58A44 107 aa8.31□□□□□ -1.08
UBE3B-204ENST00000449510 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
UBE3B-204ENST00000449510 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
UBE3B-204ENST00000449510 IGKV4-1P06312 121 aa8.3□□□□□ -1.08
UBE3B-204ENST00000449510 ELOF1P60002 83 aaKnown RBP8.3□□□□□ -1.08
UBE3B-204ENST00000449510 C19orf73Q9NVV2 129 aa8.3□□□□□ -1.08
UBE3B-204ENST00000449510 Q6ZRP5 223 aa8.29□□□□□ -1.08
UBE3B-204ENST00000449510 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
UBE3B-204ENST00000449510 RPL37AP61513 92 aaKnown RBP8.29□□□□□ -1.08
UBE3B-204ENST00000449510 FAM168BA1KXE4 195 aa8.28□□□□□ -1.08
UBE3B-204ENST00000449510 SEC61GP60059 68 aa8.28□□□□□ -1.08
UBE3B-204ENST00000449510 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
UBE3B-204ENST00000449510 NDUFB1O75438 58 aa8.27□□□□□ -1.08
UBE3B-204ENST00000449510 FSHBP01225 129 aa8.27□□□□□ -1.09
UBE3B-204ENST00000449510 VPREB1P12018 145 aa8.26□□□□□ -1.09
UBE3B-204ENST00000449510 FP248Q71RG6 208 aaPredicted RBP8.26□□□□□ -1.09
UBE3B-204ENST00000449510 FAM229BQ4G0N7 80 aa8.26□□□□□ -1.09
UBE3B-204ENST00000449510 K7EQZ3 153 aa8.25□□□□□ -1.09
UBE3B-204ENST00000449510 J3QKU1 62 aa8.25□□□□□ -1.09
UBE3B-204ENST00000449510 A8MUN3 132 aa8.25□□□□□ -1.09
UBE3B-204ENST00000449510 SPINK6Q6UWN8 80 aa8.25□□□□□ -1.09
UBE3B-204ENST00000449510 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
UBE3B-204ENST00000449510 SERTAD4-AS1Q5TG53 156 aa8.24□□□□□ -1.09
UBE3B-204ENST00000449510 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
UBE3B-204ENST00000449510 PDZD2O15018 2839 aa8.24□□□□□ -1.09
UBE3B-204ENST00000449510 IGLV9-49A0A0B4J1Y8 123 aa8.23□□□□□ -1.09
UBE3B-204ENST00000449510 TRBV7-4A0A0J9YYF1 115 aa8.23□□□□□ -1.09
UBE3B-204ENST00000449510 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
UBE3B-204ENST00000449510 C1orf64Q8NEQ6 169 aa8.22□□□□□ -1.09
UBE3B-204ENST00000449510 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
UBE3B-204ENST00000449510 Q8N377 158 aa8.21□□□□□ -1.1
UBE3B-204ENST00000449510 H0Y9P7 68 aa8.2□□□□□ -1.1
UBE3B-204ENST00000449510 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
UBE3B-204ENST00000449510 BCE1O60756 84 aa8.2□□□□□ -1.1
UBE3B-204ENST00000449510 Q8NAQ8 132 aa8.19□□□□□ -1.1
UBE3B-204ENST00000449510 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
UBE3B-204ENST00000449510 Q8NBF4 154 aa8.17□□□□□ -1.1
UBE3B-204ENST00000449510 Q9BRP9 147 aa8.17□□□□□ -1.1
UBE3B-204ENST00000449510 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
UBE3B-204ENST00000449510 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
UBE3B-204ENST00000449510 ERC2-IT1O76042 136 aa8.16□□□□□ -1.1
UBE3B-204ENST00000449510 C16orf95Q9H693 158 aa8.16□□□□□ -1.1
UBE3B-204ENST00000449510 Q6ZRX8 168 aa8.15□□□□□ -1.1
UBE3B-204ENST00000449510 A0A1W2PNM2 257 aa8.15□□□□□ -1.1
UBE3B-204ENST00000449510 KRTAP10-3P60369 221 aa8.15□□□□□ -1.11
UBE3B-204ENST00000449510 WIPF1O43516 503 aa8.14□□□□□ -1.11
UBE3B-204ENST00000449510 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
UBE3B-204ENST00000449510 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
UBE3B-204ENST00000449510 IGHV6-1A0A0B4J1U7 121 aa8.13□□□□□ -1.11
UBE3B-204ENST00000449510 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
UBE3B-204ENST00000449510 PRR34Q9NV39 138 aa8.13□□□□□ -1.11
UBE3B-204ENST00000449510 BSNQ9UPA5 3926 aa8.12□□□□□ -1.11
UBE3B-204ENST00000449510 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
UBE3B-204ENST00000449510 OCR1Q9BZK8 76 aa8.12□□□□□ -1.11
UBE3B-204ENST00000449510 VWFP04275 2813 aa8.12□□□□□ -1.11
UBE3B-204ENST00000449510 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
UBE3B-204ENST00000449510 ZFHX3Q15911 3703 aa8.12□□□□□ -1.11
UBE3B-204ENST00000449510 STAB2Q8WWQ8 2551 aa8.12□□□□□ -1.11
UBE3B-204ENST00000449510 CASC10Q5T4H9 136 aa8.11□□□□□ -1.11
UBE3B-204ENST00000449510 CHTF8P0CG12 524 aa8.11□□□□□ -1.11
UBE3B-204ENST00000449510 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-204ENST00000449510 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
UBE3B-204ENST00000449510 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
UBE3B-204ENST00000449510 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
UBE3B-204ENST00000449510 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
UBE3B-204ENST00000449510 hDV103S1A0JD37 113 aa8.05□□□□□ -1.12
UBE3B-204ENST00000449510 LINC01556Q5JQF7 62 aa8.05□□□□□ -1.12
UBE3B-204ENST00000449510 IGFL1Q6UW32 110 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms