RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
SHANK2-210ENST00000449116 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
SHANK2-210ENST00000449116 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
SHANK2-210ENST00000449116 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
SHANK2-210ENST00000449116 K7ERJ3 54 aa9.03□□□□□ -0.96
SHANK2-210ENST00000449116 ZNF73O43830 326 aaPredicted RBP9.03□□□□□ -0.96
SHANK2-210ENST00000449116 SPRR1AP35321 89 aa9.03□□□□□ -0.96
SHANK2-210ENST00000449116 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
SHANK2-210ENST00000449116 BCE1O60756 84 aa9.02□□□□□ -0.97
SHANK2-210ENST00000449116 BATFQ16520 125 aa9.02□□□□□ -0.97
SHANK2-210ENST00000449116 H7C2G1 150 aa9.01□□□□□ -0.97
SHANK2-210ENST00000449116 SMIM11BQ8TCY0 68 aa9.01□□□□□ -0.97
SHANK2-210ENST00000449116 DIRC1Q969H9 104 aa9.01□□□□□ -0.97
SHANK2-210ENST00000449116 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
SHANK2-210ENST00000449116 Q1RN00 199 aa9□□□□□ -0.97
SHANK2-210ENST00000449116 Q8N1X5 172 aa9□□□□□ -0.97
SHANK2-210ENST00000449116 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
SHANK2-210ENST00000449116 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
SHANK2-210ENST00000449116 C6orf99Q4VX62 202 aa8.99□□□□□ -0.97
SHANK2-210ENST00000449116 Q5VSD8 79 aa8.99□□□□□ -0.97
SHANK2-210ENST00000449116 FAM19A1Q7Z5A9 133 aa8.99□□□□□ -0.97
SHANK2-210ENST00000449116 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
SHANK2-210ENST00000449116 RPL28P46779 137 aaKnown RBP8.98□□□□□ -0.97
SHANK2-210ENST00000449116 UBE2AP49459 152 aa8.97□□□□□ -0.97
SHANK2-210ENST00000449116 KRTAP10-4P60372 401 aaPredicted RBP8.97□□□□□ -0.97
SHANK2-210ENST00000449116 SNHG12Q9BXW3 62 aa8.97□□□□□ -0.97
SHANK2-210ENST00000449116 TRBV7-6A0A0J9YX20 115 aa8.96□□□□□ -0.98
SHANK2-210ENST00000449116 B5MCH6 92 aa8.96□□□□□ -0.98
SHANK2-210ENST00000449116 TSPAN13O95857 204 aa8.96□□□□□ -0.98
SHANK2-210ENST00000449116 PRLHP81277 87 aa8.96□□□□□ -0.98
SHANK2-210ENST00000449116 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.98
SHANK2-210ENST00000449116 H0Y9J4 135 aa8.95□□□□□ -0.98
SHANK2-210ENST00000449116 ZNF861PO60384 105 aa8.95□□□□□ -0.98
SHANK2-210ENST00000449116 COX7BP24311 80 aa8.95□□□□□ -0.98
SHANK2-210ENST00000449116 ELOF1P60002 83 aaKnown RBP8.95□□□□□ -0.98
SHANK2-210ENST00000449116 Q6ZRX8 168 aa8.95□□□□□ -0.98
SHANK2-210ENST00000449116 VAMP3Q15836 100 aa8.94□□□□□ -0.98
SHANK2-210ENST00000449116 ABCA13Q86UQ4 5058 aa8.94□□□□□ -0.98
SHANK2-210ENST00000449116 TRIAP1O43715 76 aa8.92□□□□□ -0.98
SHANK2-210ENST00000449116 PSMB2P49721 201 aa8.91□□□□□ -0.98
SHANK2-210ENST00000449116 HIGD2AQ9BW72 106 aa8.91□□□□□ -0.98
SHANK2-210ENST00000449116 SPINK6Q6UWN8 80 aa8.9□□□□□ -0.98
SHANK2-210ENST00000449116 SMCR5Q8TEV8 140 aa8.9□□□□□ -0.98
SHANK2-210ENST00000449116 Q9BRP9 147 aa8.9□□□□□ -0.98
SHANK2-210ENST00000449116 H0YGX0 51 aa8.89□□□□□ -0.99
SHANK2-210ENST00000449116 COX6CP09669 75 aa8.89□□□□□ -0.99
SHANK2-210ENST00000449116 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
SHANK2-210ENST00000449116 COL5A1-AS1Q5SY13 56 aa8.89□□□□□ -0.99
SHANK2-210ENST00000449116 DHRS4-AS1Q9P1J3 65 aa8.89□□□□□ -0.99
SHANK2-210ENST00000449116 TAX1BP3O14907 124 aa8.88□□□□□ -0.99
SHANK2-210ENST00000449116 LINC00575Q6W349 94 aa8.87□□□□□ -0.99
SHANK2-210ENST00000449116 PKHD1L1Q86WI1 4243 aa8.86□□□□□ -0.99
SHANK2-210ENST00000449116 C9orf118A6NHY6 69 aa8.86□□□□□ -0.99
SHANK2-210ENST00000449116 SLC25A20O43772 301 aa8.86□□□□□ -0.99
SHANK2-210ENST00000449116 SCGB1C2P0DMR2 95 aa8.86□□□□□ -0.99
SHANK2-210ENST00000449116 NAA38Q9BRA0 125 aaKnown RBP8.86□□□□□ -0.99
SHANK2-210ENST00000449116 ERC2-IT1O76042 136 aa8.85□□□□□ -0.99
SHANK2-210ENST00000449116 hADV29S1A0JD25 119 aa8.84□□□□□ -0.99
SHANK2-210ENST00000449116 H3BUT2 72 aa8.84□□□□□ -0.99
SHANK2-210ENST00000449116 SNCGO76070 127 aa8.83□□□□□ -1
SHANK2-210ENST00000449116 CLEC2BQ92478 149 aa8.83□□□□□ -1
SHANK2-210ENST00000449116 FAM218AQ96MZ4 157 aa8.83□□□□□ -1
SHANK2-210ENST00000449116 KRTAP4-5Q9BYR2 181 aa8.83□□□□□ -1
SHANK2-210ENST00000449116 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
SHANK2-210ENST00000449116 A0A1B0GX51 115 aa8.82□□□□□ -1
SHANK2-210ENST00000449116 LYRM7Q5U5X0 104 aa8.82□□□□□ -1
SHANK2-210ENST00000449116 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
SHANK2-210ENST00000449116 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
SHANK2-210ENST00000449116 SPRR4Q96PI1 79 aa8.8□□□□□ -1
SHANK2-210ENST00000449116 A0A1W2PPM0 123 aa8.79□□□□□ -1
SHANK2-210ENST00000449116 LST1O00453 97 aa8.78□□□□□ -1
SHANK2-210ENST00000449116 FABP2P12104 132 aa8.78□□□□□ -1
SHANK2-210ENST00000449116 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.78□□□□□ -1
SHANK2-210ENST00000449116 Q6ZQY7 126 aa8.78□□□□□ -1
SHANK2-210ENST00000449116 TCL1BO95988 128 aa8.77□□□□□ -1.01
SHANK2-210ENST00000449116 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1.01
SHANK2-210ENST00000449116 GAGE2AQ6NT46 116 aa8.77□□□□□ -1.01
SHANK2-210ENST00000449116 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
SHANK2-210ENST00000449116 DNAL4O96015 105 aa8.76□□□□□ -1.01
SHANK2-210ENST00000449116 TRACP01848 142 aa8.76□□□□□ -1.01
SHANK2-210ENST00000449116 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
SHANK2-210ENST00000449116 IGLV5-48A0A075B6I7 105 aa8.75□□□□□ -1.01
SHANK2-210ENST00000449116 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
SHANK2-210ENST00000449116 DEFB105AQ8NG35 78 aa8.75□□□□□ -1.01
SHANK2-210ENST00000449116 TEX49A0A1B0GTD5 131 aa8.74□□□□□ -1.01
SHANK2-210ENST00000449116 SPRR1BP22528 89 aa8.74□□□□□ -1.01
SHANK2-210ENST00000449116 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
SHANK2-210ENST00000449116 OCIAD2Q56VL3 154 aa8.74□□□□□ -1.01
SHANK2-210ENST00000449116 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
SHANK2-210ENST00000449116 ANAPC11Q9NYG5 84 aa8.73□□□□□ -1.01
SHANK2-210ENST00000449116 GHRHP01286 108 aa8.72□□□□□ -1.01
SHANK2-210ENST00000449116 Q8N377 158 aa8.72□□□□□ -1.01
SHANK2-210ENST00000449116 SPCS1Q9Y6A9 102 aa8.72□□□□□ -1.01
SHANK2-210ENST00000449116 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
SHANK2-210ENST00000449116 PPDPFLQ8WWR9 84 aa8.71□□□□□ -1.02
SHANK2-210ENST00000449116 ORMDL1Q9P0S3 153 aa8.71□□□□□ -1.02
SHANK2-210ENST00000449116 CRYGAP11844 174 aa8.7□□□□□ -1.02
SHANK2-210ENST00000449116 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
SHANK2-210ENST00000449116 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
SHANK2-210ENST00000449116 H3BQ85 93 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms