RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KRTAP9-2Q9BYQ4 174 aa8.71□□□□□ -1.02
USP39-206ENST00000448971 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
USP39-206ENST00000448971 DDTP30046 118 aa8.7□□□□□ -1.02
USP39-206ENST00000448971 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
USP39-206ENST00000448971 SOSTDC1Q6X4U4 206 aa8.7□□□□□ -1.02
USP39-206ENST00000448971 HIGD2AQ9BW72 106 aa8.7□□□□□ -1.02
USP39-206ENST00000448971 ETDCA0A1B0GVM5 59 aa8.69□□□□□ -1.02
USP39-206ENST00000448971 TIMM17BO60830 172 aa8.69□□□□□ -1.02
USP39-206ENST00000448971 NDUFC2O95298 119 aa8.69□□□□□ -1.02
USP39-206ENST00000448971 LITAFQ99732 161 aa8.69□□□□□ -1.02
USP39-206ENST00000448971 SNRPEP62304 92 aaKnown RBP8.68□□□□□ -1.02
USP39-206ENST00000448971 KCNQ1DNQ9H478 68 aa8.68□□□□□ -1.02
USP39-206ENST00000448971 KRTAP9-6A0A140TA67 174 aa8.67□□□□□ -1.02
USP39-206ENST00000448971 LINC00308Q8TCZ7 52 aa8.67□□□□□ -1.02
USP39-206ENST00000448971 MUC2Q02817 5179 aa8.67□□□□□ -1.02
USP39-206ENST00000448971 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
USP39-206ENST00000448971 CRYGAP11844 174 aa8.66□□□□□ -1.02
USP39-206ENST00000448971 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
USP39-206ENST00000448971 SPANXCQ9NY87 97 aa8.66□□□□□ -1.02
USP39-206ENST00000448971 SPRR1AP35321 89 aa8.65□□□□□ -1.02
USP39-206ENST00000448971 TRAV23DV6A0A075B6W5 121 aa8.64□□□□□ -1.03
USP39-206ENST00000448971 A0A087X002 238 aa8.64□□□□□ -1.03
USP39-206ENST00000448971 PCP2Q8IVA1 136 aa8.64□□□□□ -1.03
USP39-206ENST00000448971 ANAPC11Q9NYG5 84 aa8.64□□□□□ -1.03
USP39-206ENST00000448971 SPANXDQ9BXN6 97 aa8.63□□□□□ -1.03
USP39-206ENST00000448971 C5orf52A6NGY3 159 aa8.62□□□□□ -1.03
USP39-206ENST00000448971 SCGB1D1O95968 90 aa8.62□□□□□ -1.03
USP39-206ENST00000448971 IGLV6-57P01721 117 aa8.62□□□□□ -1.03
USP39-206ENST00000448971 OR13C6PQ8NH95 151 aa8.62□□□□□ -1.03
USP39-206ENST00000448971 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
USP39-206ENST00000448971 ZNF706Q9Y5V0 76 aaPredicted RBP8.62□□□□□ -1.03
USP39-206ENST00000448971 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
USP39-206ENST00000448971 FAM229BQ4G0N7 80 aa8.61□□□□□ -1.03
USP39-206ENST00000448971 COPS9Q8WXC6 57 aa8.61□□□□□ -1.03
USP39-206ENST00000448971 CBY1Q9Y3M2 126 aa8.61□□□□□ -1.03
USP39-206ENST00000448971 B5MCH6 92 aa8.6□□□□□ -1.03
USP39-206ENST00000448971 ZNF73O43830 326 aaPredicted RBP8.59□□□□□ -1.03
USP39-206ENST00000448971 Q6ZRX8 168 aa8.59□□□□□ -1.03
USP39-206ENST00000448971 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
USP39-206ENST00000448971 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
USP39-206ENST00000448971 IFITM1P13164 125 aa8.58□□□□□ -1.04
USP39-206ENST00000448971 Q6ZVH6 145 aa8.58□□□□□ -1.04
USP39-206ENST00000448971 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
USP39-206ENST00000448971 JOSD1Q15040 202 aaPredicted RBP8.57□□□□□ -1.04
USP39-206ENST00000448971 KRTAP13-2Q52LG2 175 aa8.57□□□□□ -1.04
USP39-206ENST00000448971 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
USP39-206ENST00000448971 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
USP39-206ENST00000448971 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
USP39-206ENST00000448971 Q9BRP9 147 aa8.54□□□□□ -1.04
USP39-206ENST00000448971 A6NDN8 102 aa8.53□□□□□ -1.04
USP39-206ENST00000448971 TSPAN13O95857 204 aa8.53□□□□□ -1.04
USP39-206ENST00000448971 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
USP39-206ENST00000448971 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
USP39-206ENST00000448971 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
USP39-206ENST00000448971 ERC2-IT1O76042 136 aa8.52□□□□□ -1.05
USP39-206ENST00000448971 C6orf99Q4VX62 202 aa8.51□□□□□ -1.05
USP39-206ENST00000448971 COX8AP10176 69 aa8.49□□□□□ -1.05
USP39-206ENST00000448971 COX7BP24311 80 aa8.49□□□□□ -1.05
USP39-206ENST00000448971 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
USP39-206ENST00000448971 PAM16Q9Y3D7 125 aa8.49□□□□□ -1.05
USP39-206ENST00000448971 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
USP39-206ENST00000448971 ELOF1P60002 83 aaKnown RBP8.48□□□□□ -1.05
USP39-206ENST00000448971 PRR4Q16378 134 aa8.48□□□□□ -1.05
USP39-206ENST00000448971 SPATA45Q537H7 98 aa8.48□□□□□ -1.05
USP39-206ENST00000448971 VAMP8Q9BV40 100 aa8.48□□□□□ -1.05
USP39-206ENST00000448971 DHRS4-AS1Q9P1J3 65 aa8.48□□□□□ -1.05
USP39-206ENST00000448971 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
USP39-206ENST00000448971 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.06
USP39-206ENST00000448971 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
USP39-206ENST00000448971 A4D1N5 150 aa8.45□□□□□ -1.06
USP39-206ENST00000448971 MOBPQ13875 183 aa8.45□□□□□ -1.06
USP39-206ENST00000448971 Q8NBF4 154 aa8.45□□□□□ -1.06
USP39-206ENST00000448971 C14orf144Q96I85 54 aa8.45□□□□□ -1.06
USP39-206ENST00000448971 A0A1B0GWB2 263 aa8.44□□□□□ -1.06
USP39-206ENST00000448971 C9orf153Q5TBE3 101 aa8.44□□□□□ -1.06
USP39-206ENST00000448971 FAT4Q6V0I7 4981 aa8.43□□□□□ -1.06
USP39-206ENST00000448971 DLEU1O43261 78 aa8.43□□□□□ -1.06
USP39-206ENST00000448971 C12orf57Q99622 126 aa8.43□□□□□ -1.06
USP39-206ENST00000448971 TRBV7-6A0A0J9YX20 115 aa8.42□□□□□ -1.06
USP39-206ENST00000448971 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
USP39-206ENST00000448971 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
USP39-206ENST00000448971 SMIM11BQ8TCY0 68 aa8.42□□□□□ -1.06
USP39-206ENST00000448971 RETNLBQ9BQ08 111 aa8.42□□□□□ -1.06
USP39-206ENST00000448971 SLC25A34Q6PIV7 304 aa8.41□□□□□ -1.06
USP39-206ENST00000448971 C9orf118A6NHY6 69 aa8.4□□□□□ -1.06
USP39-206ENST00000448971 KRTAP4-12Q9BQ66 201 aa8.4□□□□□ -1.06
USP39-206ENST00000448971 A0A0U1RQV1 116 aa8.38□□□□□ -1.07
USP39-206ENST00000448971 CTAG1AP78358 180 aa8.38□□□□□ -1.07
USP39-206ENST00000448971 TAL2Q16559 108 aa8.38□□□□□ -1.07
USP39-206ENST00000448971 PYY3Q5JQD4 70 aa8.38□□□□□ -1.07
USP39-206ENST00000448971 DEFB105AQ8NG35 78 aa8.38□□□□□ -1.07
USP39-206ENST00000448971 NHP2Q9NX24 153 aaKnown RBP8.38□□□□□ -1.07
USP39-206ENST00000448971 HIGD1BQ9P298 99 aa8.38□□□□□ -1.07
USP39-206ENST00000448971 SPRR1BP22528 89 aa8.37□□□□□ -1.07
USP39-206ENST00000448971 VAMP3Q15836 100 aa8.37□□□□□ -1.07
USP39-206ENST00000448971 SSBP3-AS1Q7Z2R9 100 aa8.37□□□□□ -1.07
USP39-206ENST00000448971 LAMTOR3Q9UHA4 124 aa8.37□□□□□ -1.07
USP39-206ENST00000448971 C2orf91Q6ZV80 131 aa8.36□□□□□ -1.07
USP39-206ENST00000448971 SLC25A20O43772 301 aa8.35□□□□□ -1.07
USP39-206ENST00000448971 SPINK1P00995 79 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 281.3 ms