RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 SPRR1AP35321 89 aa10.74□□□□□ -0.69
HLCS-205ENST00000448340 RPL28P46779 137 aaKnown RBP10.74□□□□□ -0.69
HLCS-205ENST00000448340 DIRC1Q969H9 104 aa10.74□□□□□ -0.69
HLCS-205ENST00000448340 CBY1Q9Y3M2 126 aa10.74□□□□□ -0.69
HLCS-205ENST00000448340 UBE2AP49459 152 aa10.73□□□□□ -0.69
HLCS-205ENST00000448340 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
HLCS-205ENST00000448340 OR13C6PQ8NH95 151 aa10.73□□□□□ -0.69
HLCS-205ENST00000448340 FAM19A1Q7Z5A9 133 aa10.72□□□□□ -0.69
HLCS-205ENST00000448340 KRTAP13-1Q8IUC0 172 aa10.72□□□□□ -0.69
HLCS-205ENST00000448340 TRAV23DV6A0A075B6W5 121 aa10.71□□□□□ -0.69
HLCS-205ENST00000448340 UQCR10Q9UDW1 63 aa10.71□□□□□ -0.69
HLCS-205ENST00000448340 A4D1N5 150 aa10.7□□□□□ -0.7
HLCS-205ENST00000448340 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
HLCS-205ENST00000448340 H0Y9J4 135 aa10.7□□□□□ -0.7
HLCS-205ENST00000448340 TAL2Q16559 108 aa10.7□□□□□ -0.7
HLCS-205ENST00000448340 TRAV13-2A0A0B4J235 113 aa10.69□□□□□ -0.7
HLCS-205ENST00000448340 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
HLCS-205ENST00000448340 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
HLCS-205ENST00000448340 PRLHP81277 87 aa10.69□□□□□ -0.7
HLCS-205ENST00000448340 A6NDN8 102 aa10.68□□□□□ -0.7
HLCS-205ENST00000448340 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
HLCS-205ENST00000448340 LRP2P98164 4655 aa10.67□□□□□ -0.7
HLCS-205ENST00000448340 RNF213Q63HN8 5207 aa10.66□□□□□ -0.7
HLCS-205ENST00000448340 B5MCH6 92 aa10.65□□□□□ -0.7
HLCS-205ENST00000448340 CEND1Q8N111 149 aa10.65□□□□□ -0.7
HLCS-205ENST00000448340 TNXBP22105 4242 aa10.64□□□□□ -0.71
HLCS-205ENST00000448340 HINT1P49773 126 aaPredicted RBP10.64□□□□□ -0.71
HLCS-205ENST00000448340 HSD52Q0P140 79 aa10.62□□□□□ -0.71
HLCS-205ENST00000448340 Q6ZRX8 168 aa10.62□□□□□ -0.71
HLCS-205ENST00000448340 C12orf57Q99622 126 aa10.62□□□□□ -0.71
HLCS-205ENST00000448340 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
HLCS-205ENST00000448340 PRO1933Q9H354 126 aa10.62□□□□□ -0.71
HLCS-205ENST00000448340 C6orf99Q4VX62 202 aa10.61□□□□□ -0.71
HLCS-205ENST00000448340 LINC01600Q96MT4 127 aa10.61□□□□□ -0.71
HLCS-205ENST00000448340 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
HLCS-205ENST00000448340 A6NJY4 79 aa10.6□□□□□ -0.71
HLCS-205ENST00000448340 TRBV7-6A0A0J9YX20 115 aa10.59□□□□□ -0.71
HLCS-205ENST00000448340 KRTAP1-4P0C5Y4 121 aa10.59□□□□□ -0.71
HLCS-205ENST00000448340 CFC1BP0CG36 223 aa10.59□□□□□ -0.71
HLCS-205ENST00000448340 CFC1P0CG37 223 aa10.59□□□□□ -0.71
HLCS-205ENST00000448340 SMCR5Q8TEV8 140 aa10.59□□□□□ -0.71
HLCS-205ENST00000448340 A0A0B4J2C4 111 aa10.58□□□□□ -0.72
HLCS-205ENST00000448340 RPL13AP40429 203 aaKnown RBP10.58□□□□□ -0.72
HLCS-205ENST00000448340 FXYD2P54710 66 aa10.58□□□□□ -0.72
HLCS-205ENST00000448340 SMIM11BQ8TCY0 68 aa10.58□□□□□ -0.72
HLCS-205ENST00000448340 Q9BRP9 147 aa10.58□□□□□ -0.72
HLCS-205ENST00000448340 COX7BP24311 80 aa10.57□□□□□ -0.72
HLCS-205ENST00000448340 RAB37Q96AX2 223 aa10.57□□□□□ -0.72
HLCS-205ENST00000448340 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
HLCS-205ENST00000448340 A0A1B0GWB2 263 aa10.54□□□□□ -0.72
HLCS-205ENST00000448340 TSTD3H0UI37 97 aa10.54□□□□□ -0.72
HLCS-205ENST00000448340 ZNF706Q9Y5V0 76 aaPredicted RBP10.54□□□□□ -0.72
HLCS-205ENST00000448340 ERC2-IT1O76042 136 aa10.53□□□□□ -0.72
HLCS-205ENST00000448340 DHRS4-AS1Q9P1J3 65 aa10.53□□□□□ -0.72
HLCS-205ENST00000448340 KRTAP10-8P60410 259 aa10.52□□□□□ -0.73
HLCS-205ENST00000448340 VAMP3Q15836 100 aa10.52□□□□□ -0.73
HLCS-205ENST00000448340 SPRR4Q96PI1 79 aa10.52□□□□□ -0.73
HLCS-205ENST00000448340 PRO1854Q9UHT4 67 aa10.52□□□□□ -0.73
HLCS-205ENST00000448340 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
HLCS-205ENST00000448340 BVES-AS1Q5T3Y7 98 aa10.5□□□□□ -0.73
HLCS-205ENST00000448340 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
HLCS-205ENST00000448340 NHP2Q9NX24 153 aaKnown RBP10.5□□□□□ -0.73
HLCS-205ENST00000448340 H7C2G1 150 aa10.49□□□□□ -0.73
HLCS-205ENST00000448340 CTAG1AP78358 180 aa10.49□□□□□ -0.73
HLCS-205ENST00000448340 ANAPC11Q9NYG5 84 aa10.49□□□□□ -0.73
HLCS-205ENST00000448340 CRYGAP11844 174 aa10.48□□□□□ -0.73
HLCS-205ENST00000448340 A0A087X002 238 aa10.46□□□□□ -0.73
HLCS-205ENST00000448340 Q1RN00 199 aa10.46□□□□□ -0.73
HLCS-205ENST00000448340 LINC00483Q53H64 154 aa10.46□□□□□ -0.73
HLCS-205ENST00000448340 M0R143 59 aa10.45□□□□□ -0.74
HLCS-205ENST00000448340 GAGE2AQ6NT46 116 aa10.45□□□□□ -0.74
HLCS-205ENST00000448340 K7ERJ3 54 aa10.44□□□□□ -0.74
HLCS-205ENST00000448340 SLC25A20O43772 301 aa10.44□□□□□ -0.74
HLCS-205ENST00000448340 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
HLCS-205ENST00000448340 LINC00575Q6W349 94 aa10.43□□□□□ -0.74
HLCS-205ENST00000448340 H0YGX0 51 aa10.41□□□□□ -0.74
HLCS-205ENST00000448340 KRTAP13-2Q52LG2 175 aa10.41□□□□□ -0.74
HLCS-205ENST00000448340 TYMSOSQ8TAI1 123 aa10.4□□□□□ -0.74
HLCS-205ENST00000448340 hADV29S1A0JD25 119 aa10.39□□□□□ -0.75
HLCS-205ENST00000448340 SPRR1BP22528 89 aa10.39□□□□□ -0.75
HLCS-205ENST00000448340 TRIAP1O43715 76 aa10.37□□□□□ -0.75
HLCS-205ENST00000448340 TSPAN13O95857 204 aa10.37□□□□□ -0.75
HLCS-205ENST00000448340 C3orf22Q8N5N4 141 aa10.37□□□□□ -0.75
HLCS-205ENST00000448340 IGLV5-48A0A075B6I7 105 aa10.36□□□□□ -0.75
HLCS-205ENST00000448340 TEX49A0A1B0GTD5 131 aa10.36□□□□□ -0.75
HLCS-205ENST00000448340 PSMB2P49721 201 aa10.36□□□□□ -0.75
HLCS-205ENST00000448340 SNCGO76070 127 aa10.35□□□□□ -0.75
HLCS-205ENST00000448340 DEFB105AQ8NG35 78 aa10.35□□□□□ -0.75
HLCS-205ENST00000448340 COX6CP09669 75 aa10.34□□□□□ -0.75
HLCS-205ENST00000448340 LINC01547P58512 204 aaPredicted RBP10.34□□□□□ -0.75
HLCS-205ENST00000448340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.33□□□□□ -0.76
HLCS-205ENST00000448340 Q6ZQY7 126 aa10.33□□□□□ -0.76
HLCS-205ENST00000448340 A0A1B0GX51 115 aa10.32□□□□□ -0.76
HLCS-205ENST00000448340 FAM218AQ96MZ4 157 aa10.32□□□□□ -0.76
HLCS-205ENST00000448340 LAMTOR3Q9UHA4 124 aa10.32□□□□□ -0.76
HLCS-205ENST00000448340 IGLV9-49A0A0B4J1Y8 123 aa10.31□□□□□ -0.76
HLCS-205ENST00000448340 Q8N377 158 aa10.31□□□□□ -0.76
HLCS-205ENST00000448340 MOBPQ13875 183 aa10.3□□□□□ -0.76
HLCS-205ENST00000448340 BATFQ16520 125 aa10.3□□□□□ -0.76
HLCS-205ENST00000448340 SSBP3-AS1Q7Z2R9 100 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms