RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 TRAV9-1A0A075B6T8 112 aa3.09□□□□□ -1.91
USP49-205ENST00000448078 SCO1O75880 301 aa3.09□□□□□ -1.91
USP49-205ENST00000448078 NPYP01303 97 aa3.09□□□□□ -1.91
USP49-205ENST00000448078 C9orf153Q5TBE3 101 aa3.09□□□□□ -1.91
USP49-205ENST00000448078 SND1-IT1Q9HBX3 110 aa3.09□□□□□ -1.91
USP49-205ENST00000448078 TINCRA0A1B0GVN0 87 aa3.08□□□□□ -1.92
USP49-205ENST00000448078 IGLV6-57P01721 117 aa3.08□□□□□ -1.92
USP49-205ENST00000448078 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
USP49-205ENST00000448078 SLC25A34Q6PIV7 304 aa3.08□□□□□ -1.92
USP49-205ENST00000448078 Q8N8P6 123 aa3.08□□□□□ -1.92
USP49-205ENST00000448078 SCGB3A1Q96QR1 104 aa3.08□□□□□ -1.92
USP49-205ENST00000448078 IGIPA6NJ69 53 aa3.07□□□□□ -1.92
USP49-205ENST00000448078 LINC00158P58513 81 aa3.07□□□□□ -1.92
USP49-205ENST00000448078 JOSD1Q15040 202 aaPredicted RBP3.07□□□□□ -1.92
USP49-205ENST00000448078 ALKAL2Q6UX46 152 aa3.07□□□□□ -1.92
USP49-205ENST00000448078 Q8N9L7 120 aa3.07□□□□□ -1.92
USP49-205ENST00000448078 NXT2Q9NPJ8 142 aaKnown RBP3.07□□□□□ -1.92
USP49-205ENST00000448078 ERG28Q9UKR5 140 aa3.07□□□□□ -1.92
USP49-205ENST00000448078 V9GYV3 84 aa3.07□□□□□ -1.92
USP49-205ENST00000448078 TRBV20-1A0A075B6N2 111 aa3.06□□□□□ -1.92
USP49-205ENST00000448078 SMIM27A0A1W2PRY6 76 aa3.06□□□□□ -1.92
USP49-205ENST00000448078 SMLR1H3BR10 107 aa3.06□□□□□ -1.92
USP49-205ENST00000448078 SPINK8P0C7L1 97 aa3.06□□□□□ -1.92
USP49-205ENST00000448078 MRPL54Q6P161 138 aaKnown RBP3.06□□□□□ -1.92
USP49-205ENST00000448078 ATP11AUNQ6ZP68 121 aa3.06□□□□□ -1.92
USP49-205ENST00000448078 ERASQ7Z444 233 aa3.06□□□□□ -1.92
USP49-205ENST00000448078 SLC51BQ86UW2 128 aa3.06□□□□□ -1.92
USP49-205ENST00000448078 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
USP49-205ENST00000448078 A0A0U1RRA0 63 aa3.05□□□□□ -1.92
USP49-205ENST00000448078 C20orf202A1L168 122 aa3.05□□□□□ -1.92
USP49-205ENST00000448078 LINC00587B1AMM8 73 aa3.05□□□□□ -1.92
USP49-205ENST00000448078 KRTAP4-16G5E9R7 235 aaPredicted RBP3.05□□□□□ -1.92
USP49-205ENST00000448078 HINT1P49773 126 aaPredicted RBP3.05□□□□□ -1.92
USP49-205ENST00000448078 RPL23P62829 140 aaKnown RBP3.05□□□□□ -1.92
USP49-205ENST00000448078 ADIRFQ15847 76 aa3.05□□□□□ -1.92
USP49-205ENST00000448078 ATP5L2Q7Z4Y8 100 aa3.05□□□□□ -1.92
USP49-205ENST00000448078 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
USP49-205ENST00000448078 USH2AO75445 5202 aa3.04□□□□□ -1.92
USP49-205ENST00000448078 PMVKQ15126 192 aa3.04□□□□□ -1.92
USP49-205ENST00000448078 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
USP49-205ENST00000448078 CST9LQ9H4G1 147 aa3.04□□□□□ -1.92
USP49-205ENST00000448078 CBY1Q9Y3M2 126 aa3.04□□□□□ -1.92
USP49-205ENST00000448078 SSPOA2VEC9 5147 aa3.04□□□□□ -1.92
USP49-205ENST00000448078 NDUFA6P56556 154 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
USP49-205ENST00000448078 RGS21Q2M5E4 152 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 C10orf91Q5T1B1 145 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 HRCT1Q6UXD1 115 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 BOD1L2Q8IYS8 172 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 ZNF625Q96I27 306 aaPredicted RBP3.03□□□□□ -1.92
USP49-205ENST00000448078 MAP1LC3CQ9BXW4 147 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 LAMTOR3Q9UHA4 124 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 NAT8Q9UHE5 227 aa3.03□□□□□ -1.92
USP49-205ENST00000448078 SPRR1AP35321 89 aa3.02□□□□□ -1.93
USP49-205ENST00000448078 H7C2G1 150 aa3.01□□□□□ -1.93
USP49-205ENST00000448078 CD164Q04900 197 aa3.01□□□□□ -1.93
USP49-205ENST00000448078 A0A1B0GXF2 115 aa3□□□□□ -1.93
USP49-205ENST00000448078 NCR3O14931 201 aa3□□□□□ -1.93
USP49-205ENST00000448078 TCL1BO95988 128 aa3□□□□□ -1.93
USP49-205ENST00000448078 SRP19P09132 144 aaKnown RBP3□□□□□ -1.93
USP49-205ENST00000448078 PEA15Q15121 130 aa3□□□□□ -1.93
USP49-205ENST00000448078 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
USP49-205ENST00000448078 MEIG1Q5JSS6 88 aa3□□□□□ -1.93
USP49-205ENST00000448078 S100A7L2Q5SY68 101 aa3□□□□□ -1.93
USP49-205ENST00000448078 PRO1933Q9H354 126 aa3□□□□□ -1.93
USP49-205ENST00000448078 A0A0J9YXY3 114 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 TRBV10-3A0A0K0K1G6 114 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 ERC2-IT1O76042 136 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 DDTP30046 118 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 AKR1D1P51857 326 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 Q6ZRX8 168 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 BATF3Q9NR55 127 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 SMCO4Q9NRQ5 59 aa2.99□□□□□ -1.93
USP49-205ENST00000448078 FLGP20930 4061 aaPredicted RBP2.98□□□□□ -1.93
USP49-205ENST00000448078 TAL2Q16559 108 aa2.98□□□□□ -1.93
USP49-205ENST00000448078 C6orf99Q4VX62 202 aa2.98□□□□□ -1.93
USP49-205ENST00000448078 TMEM170BQ5T4T1 132 aa2.98□□□□□ -1.93
USP49-205ENST00000448078 COMMD7Q86VX2 200 aa2.98□□□□□ -1.93
USP49-205ENST00000448078 MTURNQ8N3F0 131 aa2.98□□□□□ -1.93
USP49-205ENST00000448078 MIEN1Q9BRT3 115 aa2.98□□□□□ -1.93
USP49-205ENST00000448078 TRBV10-2A0A0K0K1G8 114 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 FAM236DA0A1B0GTK5 79 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 MT-ND4LP03901 98 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 FAM236CP0DP71 79 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 ADCYAP1P18509 176 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 Q5XG85 94 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 Q9BRP9 147 aa2.97□□□□□ -1.93
USP49-205ENST00000448078 SMIM13P0DJ93 91 aa2.96□□□□□ -1.94
USP49-205ENST00000448078 IFITM2Q01629 132 aa2.96□□□□□ -1.94
USP49-205ENST00000448078 PCP2Q8IVA1 136 aa2.96□□□□□ -1.94
USP49-205ENST00000448078 MIR7-3HGQ8N6C7 128 aa2.96□□□□□ -1.94
USP49-205ENST00000448078 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.94
USP49-205ENST00000448078 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
USP49-205ENST00000448078 MYMXA0A1B0GTQ4 84 aa2.95□□□□□ -1.94
USP49-205ENST00000448078 ZNF22P17026 224 aaPredicted RBP2.95□□□□□ -1.94
USP49-205ENST00000448078 C1orf195Q5TG92 126 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms