RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 EPPK1P58107 5090 aaKnown RBP12.15□□□□□ -0.46
SGCE-207ENST00000447873 C6orf99Q4VX62 202 aa12.14□□□□□ -0.47
SGCE-207ENST00000447873 DIRC1Q969H9 104 aa12.14□□□□□ -0.47
SGCE-207ENST00000447873 APOBP04114 4563 aaKnown RBP12.14□□□□□ -0.47
SGCE-207ENST00000447873 NAA38Q9BRA0 125 aaKnown RBP12.13□□□□□ -0.47
SGCE-207ENST00000447873 C9orf118A6NHY6 69 aa12.12□□□□□ -0.47
SGCE-207ENST00000447873 TRIAP1O43715 76 aa12.12□□□□□ -0.47
SGCE-207ENST00000447873 H3BUT2 72 aa12.11□□□□□ -0.47
SGCE-207ENST00000447873 SPRR1AP35321 89 aa12.11□□□□□ -0.47
SGCE-207ENST00000447873 PSORS1C2Q9UIG4 136 aa12.11□□□□□ -0.47
SGCE-207ENST00000447873 VAMP3Q15836 100 aa12.1□□□□□ -0.47
SGCE-207ENST00000447873 ETDCA0A1B0GVM5 59 aa12.09□□□□□ -0.47
SGCE-207ENST00000447873 COX6CP09669 75 aa12.09□□□□□ -0.47
SGCE-207ENST00000447873 CDK2AP2O75956 126 aa12.09□□□□□ -0.47
SGCE-207ENST00000447873 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
SGCE-207ENST00000447873 TRBV7-6A0A0J9YX20 115 aa12.08□□□□□ -0.48
SGCE-207ENST00000447873 KRTAP4-16G5E9R7 235 aaPredicted RBP12.08□□□□□ -0.48
SGCE-207ENST00000447873 COX7BP24311 80 aa12.07□□□□□ -0.48
SGCE-207ENST00000447873 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
SGCE-207ENST00000447873 BCE1O60756 84 aa12.06□□□□□ -0.48
SGCE-207ENST00000447873 SMR3BP02814 79 aaPredicted RBP12.06□□□□□ -0.48
SGCE-207ENST00000447873 FAM19A1Q7Z5A9 133 aa12.06□□□□□ -0.48
SGCE-207ENST00000447873 B5MCH6 92 aa12.05□□□□□ -0.48
SGCE-207ENST00000447873 H0YGX0 51 aa12.05□□□□□ -0.48
SGCE-207ENST00000447873 ELOF1P60002 83 aaKnown RBP12.05□□□□□ -0.48
SGCE-207ENST00000447873 Q6ZRX8 168 aa12.04□□□□□ -0.48
SGCE-207ENST00000447873 LINC00528Q8N1L1 170 aa12.04□□□□□ -0.48
SGCE-207ENST00000447873 A0A1W2PPM0 123 aa12.03□□□□□ -0.48
SGCE-207ENST00000447873 UBE2AP49459 152 aa12.03□□□□□ -0.48
SGCE-207ENST00000447873 LYRM7Q5U5X0 104 aa12.03□□□□□ -0.48
SGCE-207ENST00000447873 PRLHP81277 87 aa12.02□□□□□ -0.49
SGCE-207ENST00000447873 FABP2P12104 132 aa12.01□□□□□ -0.49
SGCE-207ENST00000447873 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
SGCE-207ENST00000447873 H0Y9J4 135 aa11.99□□□□□ -0.49
SGCE-207ENST00000447873 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
SGCE-207ENST00000447873 SLC25A20O43772 301 aa11.98□□□□□ -0.49
SGCE-207ENST00000447873 IGLV7-43P04211 117 aa11.98□□□□□ -0.49
SGCE-207ENST00000447873 LINC00575Q6W349 94 aa11.98□□□□□ -0.49
SGCE-207ENST00000447873 FAM218AQ96MZ4 157 aa11.98□□□□□ -0.49
SGCE-207ENST00000447873 Q9BRP9 147 aa11.97□□□□□ -0.49
SGCE-207ENST00000447873 DHRS4-AS1Q9P1J3 65 aa11.97□□□□□ -0.49
SGCE-207ENST00000447873 VPS13BQ7Z7G8 4022 aa11.97□□□□□ -0.49
SGCE-207ENST00000447873 INAFM2P0DMQ5 153 aa11.96□□□□□ -0.49
SGCE-207ENST00000447873 KRTAP13-1Q8IUC0 172 aa11.96□□□□□ -0.49
SGCE-207ENST00000447873 HIGD2AQ9BW72 106 aa11.96□□□□□ -0.49
SGCE-207ENST00000447873 SNCGO76070 127 aa11.96□□□□□ -0.5
SGCE-207ENST00000447873 TCL1BO95988 128 aa11.96□□□□□ -0.5
SGCE-207ENST00000447873 HSPG2P98160 4391 aa11.95□□□□□ -0.5
SGCE-207ENST00000447873 TRBV20-1A0A075B6N2 111 aa11.95□□□□□ -0.5
SGCE-207ENST00000447873 hADV29S1A0JD25 119 aa11.95□□□□□ -0.5
SGCE-207ENST00000447873 ZNF861PO60384 105 aa11.95□□□□□ -0.5
SGCE-207ENST00000447873 SMCR5Q8TEV8 140 aa11.94□□□□□ -0.5
SGCE-207ENST00000447873 SPCS1Q9Y6A9 102 aa11.94□□□□□ -0.5
SGCE-207ENST00000447873 RYR1P21817 5038 aa11.94□□□□□ -0.5
SGCE-207ENST00000447873 LST1O00453 97 aa11.93□□□□□ -0.5
SGCE-207ENST00000447873 ATXN8Q156A1 80 aa11.93□□□□□ -0.5
SGCE-207ENST00000447873 KIAA1109Q2LD37 5005 aa11.93□□□□□ -0.5
SGCE-207ENST00000447873 A0A1B0GX51 115 aa11.92□□□□□ -0.5
SGCE-207ENST00000447873 FAM229AH3BQW9 127 aa11.92□□□□□ -0.5
SGCE-207ENST00000447873 FAT1Q14517 4588 aa11.92□□□□□ -0.5
SGCE-207ENST00000447873 SRRM2Q9UQ35 2752 aaKnown RBP11.91□□□□□ -0.5
SGCE-207ENST00000447873 DNAL4O96015 105 aa11.9□□□□□ -0.5
SGCE-207ENST00000447873 ERC2-IT1O76042 136 aa11.89□□□□□ -0.51
SGCE-207ENST00000447873 TRACP01848 142 aa11.89□□□□□ -0.51
SGCE-207ENST00000447873 PLA2G1BP04054 148 aaKnown RBP11.89□□□□□ -0.51
SGCE-207ENST00000447873 A0A1B0GV90 55 aa11.88□□□□□ -0.51
SGCE-207ENST00000447873 K7EP34 96 aa11.88□□□□□ -0.51
SGCE-207ENST00000447873 Q5VSD8 79 aa11.87□□□□□ -0.51
SGCE-207ENST00000447873 Q6ZQY7 126 aa11.87□□□□□ -0.51
SGCE-207ENST00000447873 H3BMG7 143 aa11.86□□□□□ -0.51
SGCE-207ENST00000447873 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
SGCE-207ENST00000447873 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
SGCE-207ENST00000447873 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.85□□□□□ -0.51
SGCE-207ENST00000447873 ST20-AS1Q8NBB2 130 aa11.84□□□□□ -0.51
SGCE-207ENST00000447873 Q8N1X5 172 aa11.83□□□□□ -0.52
SGCE-207ENST00000447873 DEFB105AQ8NG35 78 aa11.82□□□□□ -0.52
SGCE-207ENST00000447873 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
SGCE-207ENST00000447873 ORMDL1Q9P0S3 153 aa11.81□□□□□ -0.52
SGCE-207ENST00000447873 BIRC6Q9NR09 4857 aa11.8□□□□□ -0.52
SGCE-207ENST00000447873 C9JAW5 83 aa11.8□□□□□ -0.52
SGCE-207ENST00000447873 OCIAD2Q56VL3 154 aa11.8□□□□□ -0.52
SGCE-207ENST00000447873 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
SGCE-207ENST00000447873 GHRHP01286 108 aa11.79□□□□□ -0.52
SGCE-207ENST00000447873 GAGE2AQ6NT46 116 aa11.79□□□□□ -0.52
SGCE-207ENST00000447873 KRTAP17-1Q9BYP8 105 aa11.79□□□□□ -0.52
SGCE-207ENST00000447873 SPRR4Q96PI1 79 aa11.78□□□□□ -0.52
SGCE-207ENST00000447873 IGLV5-48A0A075B6I7 105 aa11.77□□□□□ -0.53
SGCE-207ENST00000447873 TEX49A0A1B0GTD5 131 aa11.76□□□□□ -0.53
SGCE-207ENST00000447873 BAALC-AS2P0C853 105 aa11.76□□□□□ -0.53
SGCE-207ENST00000447873 LINC01547P58512 204 aaPredicted RBP11.76□□□□□ -0.53
SGCE-207ENST00000447873 MTURNQ8N3F0 131 aa11.76□□□□□ -0.53
SGCE-207ENST00000447873 H3BQ85 93 aa11.75□□□□□ -0.53
SGCE-207ENST00000447873 TMEM256-PLSCR3K7ERE1 68 aa11.75□□□□□ -0.53
SGCE-207ENST00000447873 Q8N377 158 aa11.75□□□□□ -0.53
SGCE-207ENST00000447873 UBE2V1Q13404 147 aa11.74□□□□□ -0.53
SGCE-207ENST00000447873 PPDPFLQ8WWR9 84 aa11.74□□□□□ -0.53
SGCE-207ENST00000447873 SPRR1BP22528 89 aa11.71□□□□□ -0.53
SGCE-207ENST00000447873 H3BT86 120 aa11.71□□□□□ -0.54
SGCE-207ENST00000447873 LINC00483Q53H64 154 aa11.71□□□□□ -0.54
SGCE-207ENST00000447873 PKHD1L1Q86WI1 4243 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms