RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ZNF861PO60384 105 aa8.03□□□□□ -1.12
HLA-DOB-207ENST00000447394 TRAV23DV6A0A075B6W5 121 aa8.02□□□□□ -1.13
HLA-DOB-207ENST00000447394 A4D1N5 150 aa8.02□□□□□ -1.13
HLA-DOB-207ENST00000447394 H0Y9J4 135 aa8.02□□□□□ -1.13
HLA-DOB-207ENST00000447394 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
HLA-DOB-207ENST00000447394 SPRR1AP35321 89 aa8.01□□□□□ -1.13
HLA-DOB-207ENST00000447394 RPL28P46779 137 aaKnown RBP8.01□□□□□ -1.13
HLA-DOB-207ENST00000447394 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
HLA-DOB-207ENST00000447394 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
HLA-DOB-207ENST00000447394 HIGD1BQ9P298 99 aa8.01□□□□□ -1.13
HLA-DOB-207ENST00000447394 COPS9Q8WXC6 57 aa8□□□□□ -1.13
HLA-DOB-207ENST00000447394 DIRC1Q969H9 104 aa8□□□□□ -1.13
HLA-DOB-207ENST00000447394 ETDCA0A1B0GVM5 59 aa7.99□□□□□ -1.13
HLA-DOB-207ENST00000447394 A6NDN8 102 aa7.99□□□□□ -1.13
HLA-DOB-207ENST00000447394 M0R143 59 aa7.99□□□□□ -1.13
HLA-DOB-207ENST00000447394 TNXBP22105 4242 aa7.99□□□□□ -1.13
HLA-DOB-207ENST00000447394 B5MCH6 92 aa7.98□□□□□ -1.13
HLA-DOB-207ENST00000447394 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
HLA-DOB-207ENST00000447394 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
HLA-DOB-207ENST00000447394 ZNF73O43830 326 aaPredicted RBP7.97□□□□□ -1.13
HLA-DOB-207ENST00000447394 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
HLA-DOB-207ENST00000447394 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.14
HLA-DOB-207ENST00000447394 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.14
HLA-DOB-207ENST00000447394 UQCR10Q9UDW1 63 aa7.96□□□□□ -1.14
HLA-DOB-207ENST00000447394 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
HLA-DOB-207ENST00000447394 FXYD2P54710 66 aa7.95□□□□□ -1.14
HLA-DOB-207ENST00000447394 SMCR5Q8TEV8 140 aa7.95□□□□□ -1.14
HLA-DOB-207ENST00000447394 Q9BRP9 147 aa7.95□□□□□ -1.14
HLA-DOB-207ENST00000447394 ERC2-IT1O76042 136 aa7.94□□□□□ -1.14
HLA-DOB-207ENST00000447394 OXTP01178 125 aa7.94□□□□□ -1.14
HLA-DOB-207ENST00000447394 RPL13AP40429 203 aaKnown RBP7.94□□□□□ -1.14
HLA-DOB-207ENST00000447394 C6orf99Q4VX62 202 aa7.94□□□□□ -1.14
HLA-DOB-207ENST00000447394 Q6ZRX8 168 aa7.94□□□□□ -1.14
HLA-DOB-207ENST00000447394 CEND1Q8N111 149 aa7.94□□□□□ -1.14
HLA-DOB-207ENST00000447394 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
HLA-DOB-207ENST00000447394 J3QL48 77 aa7.93□□□□□ -1.14
HLA-DOB-207ENST00000447394 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
HLA-DOB-207ENST00000447394 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
HLA-DOB-207ENST00000447394 LINC01600Q96MT4 127 aa7.93□□□□□ -1.14
HLA-DOB-207ENST00000447394 CFC1BP0CG36 223 aa7.92□□□□□ -1.14
HLA-DOB-207ENST00000447394 CFC1P0CG37 223 aa7.92□□□□□ -1.14
HLA-DOB-207ENST00000447394 HSD52Q0P140 79 aa7.92□□□□□ -1.14
HLA-DOB-207ENST00000447394 TAL2Q16559 108 aa7.92□□□□□ -1.14
HLA-DOB-207ENST00000447394 SNHG12Q9BXW3 62 aa7.92□□□□□ -1.14
HLA-DOB-207ENST00000447394 H7C2G1 150 aa7.9□□□□□ -1.14
HLA-DOB-207ENST00000447394 COX7BP24311 80 aa7.9□□□□□ -1.14
HLA-DOB-207ENST00000447394 DMBT1Q9UGM3 2413 aaPredicted RBP7.89□□□□□ -1.15
HLA-DOB-207ENST00000447394 A0A087X002 238 aa7.89□□□□□ -1.15
HLA-DOB-207ENST00000447394 K7ERJ3 54 aa7.89□□□□□ -1.15
HLA-DOB-207ENST00000447394 ELOF1P60002 83 aaKnown RBP7.89□□□□□ -1.15
HLA-DOB-207ENST00000447394 HERC1Q15751 4861 aa7.88□□□□□ -1.15
HLA-DOB-207ENST00000447394 A0A0B4J2C4 111 aa7.88□□□□□ -1.15
HLA-DOB-207ENST00000447394 ST20-AS1Q8NBB2 130 aa7.88□□□□□ -1.15
HLA-DOB-207ENST00000447394 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
HLA-DOB-207ENST00000447394 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
HLA-DOB-207ENST00000447394 HINT1P49773 126 aaPredicted RBP7.87□□□□□ -1.15
HLA-DOB-207ENST00000447394 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
HLA-DOB-207ENST00000447394 NHP2Q9NX24 153 aaKnown RBP7.87□□□□□ -1.15
HLA-DOB-207ENST00000447394 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
HLA-DOB-207ENST00000447394 COL5A1-AS1Q5SY13 56 aa7.86□□□□□ -1.15
HLA-DOB-207ENST00000447394 TMEM238LA0A1B0GVL6 79 aa7.85□□□□□ -1.15
HLA-DOB-207ENST00000447394 A0A1B0GWB2 263 aa7.85□□□□□ -1.15
HLA-DOB-207ENST00000447394 A6NJY4 79 aa7.85□□□□□ -1.15
HLA-DOB-207ENST00000447394 BVES-AS1Q5T3Y7 98 aa7.85□□□□□ -1.15
HLA-DOB-207ENST00000447394 TRBV7-6A0A0J9YX20 115 aa7.84□□□□□ -1.15
HLA-DOB-207ENST00000447394 GAGE2AQ6NT46 116 aa7.84□□□□□ -1.15
HLA-DOB-207ENST00000447394 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
HLA-DOB-207ENST00000447394 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
HLA-DOB-207ENST00000447394 PRO1854Q9UHT4 67 aa7.83□□□□□ -1.16
HLA-DOB-207ENST00000447394 ZNF706Q9Y5V0 76 aaPredicted RBP7.83□□□□□ -1.16
HLA-DOB-207ENST00000447394 CRYGAP11844 174 aa7.82□□□□□ -1.16
HLA-DOB-207ENST00000447394 Q1RN00 199 aa7.82□□□□□ -1.16
HLA-DOB-207ENST00000447394 FAM229BQ4G0N7 80 aa7.81□□□□□ -1.16
HLA-DOB-207ENST00000447394 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
HLA-DOB-207ENST00000447394 TSPAN13O95857 204 aa7.79□□□□□ -1.16
HLA-DOB-207ENST00000447394 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
HLA-DOB-207ENST00000447394 DEFB105AQ8NG35 78 aa7.79□□□□□ -1.16
HLA-DOB-207ENST00000447394 TYMSOSQ8TAI1 123 aa7.79□□□□□ -1.16
HLA-DOB-207ENST00000447394 TRIAP1O43715 76 aa7.78□□□□□ -1.16
HLA-DOB-207ENST00000447394 VAMP3Q15836 100 aa7.78□□□□□ -1.16
HLA-DOB-207ENST00000447394 FAM218AQ96MZ4 157 aa7.78□□□□□ -1.16
HLA-DOB-207ENST00000447394 IGLV9-49A0A0B4J1Y8 123 aa7.77□□□□□ -1.17
HLA-DOB-207ENST00000447394 LINC01547P58512 204 aaPredicted RBP7.77□□□□□ -1.17
HLA-DOB-207ENST00000447394 PCP4P48539 62 aa7.76□□□□□ -1.17
HLA-DOB-207ENST00000447394 MOBPQ13875 183 aa7.75□□□□□ -1.17
HLA-DOB-207ENST00000447394 BATFQ16520 125 aa7.75□□□□□ -1.17
HLA-DOB-207ENST00000447394 CLEC2BQ92478 149 aa7.75□□□□□ -1.17
HLA-DOB-207ENST00000447394 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
HLA-DOB-207ENST00000447394 SLC25A20O43772 301 aa7.74□□□□□ -1.17
HLA-DOB-207ENST00000447394 SPRR1BP22528 89 aa7.74□□□□□ -1.17
HLA-DOB-207ENST00000447394 PSMB2P49721 201 aa7.74□□□□□ -1.17
HLA-DOB-207ENST00000447394 Q6ZQY7 126 aa7.74□□□□□ -1.17
HLA-DOB-207ENST00000447394 NAA38Q9BRA0 125 aaKnown RBP7.74□□□□□ -1.17
HLA-DOB-207ENST00000447394 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
HLA-DOB-207ENST00000447394 IGLV5-48A0A075B6I7 105 aa7.72□□□□□ -1.17
HLA-DOB-207ENST00000447394 UBE2V1Q13404 147 aa7.72□□□□□ -1.17
HLA-DOB-207ENST00000447394 C9orf153Q5TBE3 101 aa7.72□□□□□ -1.17
HLA-DOB-207ENST00000447394 Q8N377 158 aa7.72□□□□□ -1.17
HLA-DOB-207ENST00000447394 Q8NBF4 154 aa7.72□□□□□ -1.17
HLA-DOB-207ENST00000447394 TEX49A0A1B0GTD5 131 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms