RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MRPS36P82909 103 aaKnown RBP2.8□□□□□ -1.96
SDCBP-205ENST00000447267 MIC13Q5XKP0 118 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 ZFP2Q6ZN57 461 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 LINC00643Q86TS7 51 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 ARL17AQ8IVW1 177 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 OR8A1Q8NGG7 326 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 UBE2WQ96B02 151 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 RMI2Q96E14 147 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 SLC25A2Q9BXI2 301 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 SLC25A22Q9H936 323 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 IGHV1-58A0A0C4DH39 117 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 K7EMI3 77 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 LTAP01374 205 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 ATP5L2Q7Z4Y8 100 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 LINC00337Q8N6G1 96 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 C11orf52Q96A22 123 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 PGLYRP4Q96LB8 373 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 TRGV9Q99603 122 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 OPRPNQ99935 248 aaPredicted RBP2.79□□□□□ -1.96
SDCBP-205ENST00000447267 TMEM243Q9BU79 118 aa2.79□□□□□ -1.96
SDCBP-205ENST00000447267 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 UBE2L5PA0A1B0GUS4 154 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 A0A1B0GXF2 115 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 LINC01549A6NIU2 74 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 PEX7O00628 323 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 TIMM17BO60830 172 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 ERHP84090 104 aaKnown RBP2.78□□□□□ -1.96
SDCBP-205ENST00000447267 FAM104BQ5XKR9 115 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 IFI27L1Q96BM0 104 aa2.78□□□□□ -1.96
SDCBP-205ENST00000447267 IGKV2D-26A0A0A0MRZ7 120 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 TRBV10-2A0A0K0K1G8 114 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 TEX49A0A1B0GTD5 131 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 H3BP45 60 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 LGALS3P17931 250 aaKnown RBP2.77□□□□□ -1.97
SDCBP-205ENST00000447267 FCER1GP30273 86 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 COX6A2Q02221 97 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 SCGB1D4Q6XE38 83 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 ZNF818PQ6ZRF7 136 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 FXYD5Q96DB9 178 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 ZNF492Q9P255 531 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 KLK12Q9UKR0 248 aa2.77□□□□□ -1.97
SDCBP-205ENST00000447267 IGHV1OR15-1A0A075B7D0 117 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 TRAV12-3A0A0B4J271 114 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 M0R378 163 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 ZNF73O43830 326 aaPredicted RBP2.76□□□□□ -1.97
SDCBP-205ENST00000447267 NDUFS5O43920 106 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
SDCBP-205ENST00000447267 CENPWQ5EE01 88 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 ADAMTSL4-AS1Q5T5F5 129 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 Q8N8P6 123 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 DIRC1Q969H9 104 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 PRAC1Q96KF2 57 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 LINC00474Q9P2X8 69 aa2.76□□□□□ -1.97
SDCBP-205ENST00000447267 IGKV1D-37A0A075B6S9 117 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 TRBV27A0A0K0K1C4 114 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 H0Y9J4 135 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 IGKV1-39P01597 117 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 HBDP02042 147 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 IGKV1D-39P04432 117 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 CCKP06307 115 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 ZNF22P17026 224 aaPredicted RBP2.75□□□□□ -1.97
SDCBP-205ENST00000447267 HBBP68871 147 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 ATXN8Q156A1 80 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 C1orf137Q5JT78 98 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 SFTA2Q6UW10 78 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 COX6B2Q6YFQ2 88 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 COX8CQ7Z4L0 72 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 SMCR5Q8TEV8 140 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 SLC50A1Q9BRV3 221 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 TTTY13Q9BZ97 58 aa2.75□□□□□ -1.97
SDCBP-205ENST00000447267 A0A096LNJ9 63 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 IGHV3-16A0A0C4DH30 117 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 H7C423 109 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 TMEM256-PLSCR3K7ERE1 68 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 IFI27P40305 119 aaPredicted RBP2.74□□□□□ -1.97
SDCBP-205ENST00000447267 ZNF138P52744 262 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 LYZP61626 148 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 RBM3P98179 157 aaKnown RBP2.74□□□□□ -1.97
SDCBP-205ENST00000447267 C2orf82Q6UX34 121 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 PSENENQ9NZ42 101 aa2.74□□□□□ -1.97
SDCBP-205ENST00000447267 PIGBOS1A0A0B4J2F0 54 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 H7BZZ5 65 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 UBE2L6O14933 153 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 FXYD4P59646 89 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 Q6ZVQ6 151 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 LCA10Q71F78 164 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 FAM19A3Q7Z5A8 133 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 TIMM17AQ99595 171 aa2.73□□□□□ -1.97
SDCBP-205ENST00000447267 A8MUN3 132 aa2.72□□□□□ -1.97
SDCBP-205ENST00000447267 M0R381 172 aa2.72□□□□□ -1.97
SDCBP-205ENST00000447267 LST1O00453 97 aa2.72□□□□□ -1.97
SDCBP-205ENST00000447267 ARL14EPLP0DKL9 152 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms