RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
TRAPPC4-203ENST00000447216 KRTAP10-4P60372 401 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-203ENST00000447216 BVES-AS1Q5T3Y7 98 aa11.07□□□□□ -0.64
TRAPPC4-203ENST00000447216 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
TRAPPC4-203ENST00000447216 RPL13AP40429 203 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-203ENST00000447216 NHP2Q9NX24 153 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-203ENST00000447216 PLA2G1BP04054 148 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-203ENST00000447216 RAB37Q96AX2 223 aa11.05□□□□□ -0.64
TRAPPC4-203ENST00000447216 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
TRAPPC4-203ENST00000447216 A0A0B4J2C4 111 aa11.04□□□□□ -0.64
TRAPPC4-203ENST00000447216 BCE1O60756 84 aa11.04□□□□□ -0.64
TRAPPC4-203ENST00000447216 H7C2G1 150 aa11.03□□□□□ -0.64
TRAPPC4-203ENST00000447216 K7ERJ3 54 aa11.03□□□□□ -0.64
TRAPPC4-203ENST00000447216 FAM19A1Q7Z5A9 133 aa11.03□□□□□ -0.64
TRAPPC4-203ENST00000447216 M0R143 59 aa11.02□□□□□ -0.65
TRAPPC4-203ENST00000447216 IGLV7-43P04211 117 aa11.02□□□□□ -0.65
TRAPPC4-203ENST00000447216 SPRR1AP35321 89 aa11.02□□□□□ -0.65
TRAPPC4-203ENST00000447216 SRRM2Q9UQ35 2752 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-203ENST00000447216 ETDCA0A1B0GVM5 59 aa11.01□□□□□ -0.65
TRAPPC4-203ENST00000447216 ZNF73O43830 326 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-203ENST00000447216 SMIM11BQ8TCY0 68 aa11.01□□□□□ -0.65
TRAPPC4-203ENST00000447216 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
TRAPPC4-203ENST00000447216 KRTAP4-16G5E9R7 235 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-203ENST00000447216 UBE2AP49459 152 aa11□□□□□ -0.65
TRAPPC4-203ENST00000447216 PRLHP81277 87 aa11□□□□□ -0.65
TRAPPC4-203ENST00000447216 PRO1854Q9UHT4 67 aa11□□□□□ -0.65
TRAPPC4-203ENST00000447216 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
TRAPPC4-203ENST00000447216 A0A1B0GWB2 263 aa10.99□□□□□ -0.65
TRAPPC4-203ENST00000447216 PCP4L1A6NKN8 68 aa10.99□□□□□ -0.65
TRAPPC4-203ENST00000447216 BATFQ16520 125 aa10.99□□□□□ -0.65
TRAPPC4-203ENST00000447216 C6orf99Q4VX62 202 aa10.99□□□□□ -0.65
TRAPPC4-203ENST00000447216 DIRC1Q969H9 104 aa10.99□□□□□ -0.65
TRAPPC4-203ENST00000447216 B5MCH6 92 aa10.97□□□□□ -0.65
TRAPPC4-203ENST00000447216 KRTAP13-1Q8IUC0 172 aa10.97□□□□□ -0.65
TRAPPC4-203ENST00000447216 ZNF861PO60384 105 aa10.95□□□□□ -0.66
TRAPPC4-203ENST00000447216 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
TRAPPC4-203ENST00000447216 Q1RN00 199 aa10.95□□□□□ -0.66
TRAPPC4-203ENST00000447216 COX7BP24311 80 aa10.93□□□□□ -0.66
TRAPPC4-203ENST00000447216 Q6ZRX8 168 aa10.93□□□□□ -0.66
TRAPPC4-203ENST00000447216 HIGD2AQ9BW72 106 aa10.92□□□□□ -0.66
TRAPPC4-203ENST00000447216 TSPAN13O95857 204 aa10.91□□□□□ -0.66
TRAPPC4-203ENST00000447216 ELOF1P60002 83 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-203ENST00000447216 Q9BRP9 147 aa10.91□□□□□ -0.66
TRAPPC4-203ENST00000447216 H0Y9J4 135 aa10.9□□□□□ -0.66
TRAPPC4-203ENST00000447216 SMCR5Q8TEV8 140 aa10.9□□□□□ -0.66
TRAPPC4-203ENST00000447216 TRBV7-6A0A0J9YX20 115 aa10.89□□□□□ -0.67
TRAPPC4-203ENST00000447216 SPINK6Q6UWN8 80 aa10.89□□□□□ -0.67
TRAPPC4-203ENST00000447216 SNHG12Q9BXW3 62 aa10.89□□□□□ -0.67
TRAPPC4-203ENST00000447216 ABCA13Q86UQ4 5058 aa10.88□□□□□ -0.67
TRAPPC4-203ENST00000447216 FLG2Q5D862 2391 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC4-203ENST00000447216 ERC2-IT1O76042 136 aa10.88□□□□□ -0.67
TRAPPC4-203ENST00000447216 TRIAP1O43715 76 aa10.87□□□□□ -0.67
TRAPPC4-203ENST00000447216 VAMP3Q15836 100 aa10.87□□□□□ -0.67
TRAPPC4-203ENST00000447216 INAFM2P0DMQ5 153 aa10.86□□□□□ -0.67
TRAPPC4-203ENST00000447216 PSMB2P49721 201 aa10.86□□□□□ -0.67
TRAPPC4-203ENST00000447216 NAA38Q9BRA0 125 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-203ENST00000447216 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-203ENST00000447216 DHRS4-AS1Q9P1J3 65 aa10.83□□□□□ -0.68
TRAPPC4-203ENST00000447216 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
TRAPPC4-203ENST00000447216 ST20-AS1Q8NBB2 130 aa10.81□□□□□ -0.68
TRAPPC4-203ENST00000447216 CLEC2BQ92478 149 aa10.8□□□□□ -0.68
TRAPPC4-203ENST00000447216 FAM218AQ96MZ4 157 aa10.8□□□□□ -0.68
TRAPPC4-203ENST00000447216 H0YGX0 51 aa10.79□□□□□ -0.68
TRAPPC4-203ENST00000447216 TAX1BP3O14907 124 aa10.79□□□□□ -0.68
TRAPPC4-203ENST00000447216 FAT3Q8TDW7 4589 aa10.78□□□□□ -0.68
TRAPPC4-203ENST00000447216 SLC25A20O43772 301 aa10.78□□□□□ -0.68
TRAPPC4-203ENST00000447216 SPRR4Q96PI1 79 aa10.78□□□□□ -0.68
TRAPPC4-203ENST00000447216 ANAPC11Q9NYG5 84 aa10.78□□□□□ -0.68
TRAPPC4-203ENST00000447216 hADV29S1A0JD25 119 aa10.77□□□□□ -0.69
TRAPPC4-203ENST00000447216 COX6CP09669 75 aa10.77□□□□□ -0.69
TRAPPC4-203ENST00000447216 KRTAP1-4P0C5Y4 121 aa10.77□□□□□ -0.69
TRAPPC4-203ENST00000447216 SCGB1C2P0DMR2 95 aa10.77□□□□□ -0.69
TRAPPC4-203ENST00000447216 H3BUT2 72 aa10.76□□□□□ -0.69
TRAPPC4-203ENST00000447216 COL5A1-AS1Q5SY13 56 aa10.76□□□□□ -0.69
TRAPPC4-203ENST00000447216 LRP1Q07954 4544 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-203ENST00000447216 C9orf118A6NHY6 69 aa10.75□□□□□ -0.69
TRAPPC4-203ENST00000447216 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
TRAPPC4-203ENST00000447216 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-203ENST00000447216 DEFB105AQ8NG35 78 aa10.73□□□□□ -0.69
TRAPPC4-203ENST00000447216 MYCBP2O75592 4640 aa10.73□□□□□ -0.69
TRAPPC4-203ENST00000447216 Q6ZQY7 126 aa10.72□□□□□ -0.69
TRAPPC4-203ENST00000447216 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC4-203ENST00000447216 LINC00483Q53H64 154 aa10.69□□□□□ -0.7
TRAPPC4-203ENST00000447216 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
TRAPPC4-203ENST00000447216 PCLOQ9Y6V0 5065 aa10.68□□□□□ -0.7
TRAPPC4-203ENST00000447216 A0A087X002 238 aa10.68□□□□□ -0.7
TRAPPC4-203ENST00000447216 A0A1B0GX51 115 aa10.68□□□□□ -0.7
TRAPPC4-203ENST00000447216 SNCGO76070 127 aa10.68□□□□□ -0.7
TRAPPC4-203ENST00000447216 TCL1BO95988 128 aa10.68□□□□□ -0.7
TRAPPC4-203ENST00000447216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC4-203ENST00000447216 IGLV5-48A0A075B6I7 105 aa10.67□□□□□ -0.7
TRAPPC4-203ENST00000447216 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
TRAPPC4-203ENST00000447216 LST1O00453 97 aa10.67□□□□□ -0.7
TRAPPC4-203ENST00000447216 Q8N377 158 aa10.67□□□□□ -0.7
TRAPPC4-203ENST00000447216 LINC01600Q96MT4 127 aa10.67□□□□□ -0.7
TRAPPC4-203ENST00000447216 TEX49A0A1B0GTD5 131 aa10.66□□□□□ -0.7
TRAPPC4-203ENST00000447216 SPRR1BP22528 89 aa10.66□□□□□ -0.7
TRAPPC4-203ENST00000447216 FAM229BQ4G0N7 80 aa10.66□□□□□ -0.7
TRAPPC4-203ENST00000447216 CRYGAP11844 174 aa10.65□□□□□ -0.7
TRAPPC4-203ENST00000447216 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms