RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 NDUFA1O15239 70 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 CXCL5P42830 114 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 SYCNQ0VAF6 134 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 LINC00242Q5T6M2 205 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 STPG4Q8N801 248 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 RAB37Q96AX2 223 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
HDAC9-216ENST00000446646 USH2AO75445 5202 aa4.33□□□□□ -1.72
HDAC9-216ENST00000446646 LINC00173Q6ZV60 143 aa4.33□□□□□ -1.72
HDAC9-216ENST00000446646 FAM19A3Q7Z5A8 133 aa4.33□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BLQ99880 126 aa4.33□□□□□ -1.72
HDAC9-216ENST00000446646 PMCHL1Q16048 86 aa4.32□□□□□ -1.72
HDAC9-216ENST00000446646 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
HDAC9-216ENST00000446646 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
HDAC9-216ENST00000446646 Q8IZM0 81 aa4.32□□□□□ -1.72
HDAC9-216ENST00000446646 IFI27L1Q96BM0 104 aa4.32□□□□□ -1.72
HDAC9-216ENST00000446646 TOMM7Q9P0U1 55 aa4.32□□□□□ -1.72
HDAC9-216ENST00000446646 TRBV7-6A0A0J9YX20 115 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 SERF1AO75920 110 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 LEPROTL1O95214 131 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 PRR4Q16378 134 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 FAM104AQ969W3 186 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
HDAC9-216ENST00000446646 MRPL35Q9NZE8 188 aaKnown RBP4.31□□□□□ -1.72
HDAC9-216ENST00000446646 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 A0A096LNJ9 63 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 TRAV12-1A0A0B4J245 112 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 FAM236AA0A1B0GUQ0 79 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 FAM236BA0A1B0GV22 79 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 K7EP34 96 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 UQCRQO14949 82 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 IGLC3P0DOY3 106 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 COX6A2Q02221 97 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 COA6Q5JTJ3 125 aaKnown RBP4.3□□□□□ -1.72
HDAC9-216ENST00000446646 TMEM170BQ5T4T1 132 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 REG3GQ6UW15 175 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 CDKN2A-AS1Q9UH64 79 aa4.3□□□□□ -1.72
HDAC9-216ENST00000446646 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 F8VRH5 84 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 PSPHP1O15172 72 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 PLNP26678 52 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 MP68P56378 58 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 SPINK6Q6UWN8 80 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 FAM19A2Q8N3H0 131 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 COX7B2Q8TF08 81 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 LINC00526Q96FQ7 95 aa4.29□□□□□ -1.72
HDAC9-216ENST00000446646 SMIM1B2RUZ4 78 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BKO60814 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BJP06899 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BOP23527 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BBP33778 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BDP58876 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HERVK_113P61574 105 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BCP62807 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST2H2BEQ16778 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.28□□□□□ -1.72
HDAC9-216ENST00000446646 C3orf22Q8N5N4 141 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BHQ93079 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BNQ99877 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 HIST1H2BMQ99879 126 aa4.28□□□□□ -1.72
HDAC9-216ENST00000446646 A0A096LNI7 61 aa4.27□□□□□ -1.73
HDAC9-216ENST00000446646 NDUFC2-KCTD14E9PQ53 114 aa4.27□□□□□ -1.73
HDAC9-216ENST00000446646 TLX1NBP0CAT3 122 aa4.27□□□□□ -1.73
HDAC9-216ENST00000446646 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
HDAC9-216ENST00000446646 ATOH7Q8N100 152 aa4.27□□□□□ -1.73
HDAC9-216ENST00000446646 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 F8W1H4 67 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 TAX1BP3O14907 124 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 FABP2P12104 132 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 ZNF22P17026 224 aaPredicted RBP4.26□□□□□ -1.73
HDAC9-216ENST00000446646 NMUP48645 174 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 KIAA0087Q14695 138 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 UNQ6190/PRO20217Q6UXQ8 127 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 C6orf48Q9UBA6 75 aa4.26□□□□□ -1.73
HDAC9-216ENST00000446646 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
HDAC9-216ENST00000446646 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
HDAC9-216ENST00000446646 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
HDAC9-216ENST00000446646 SNCGO76070 127 aa4.25□□□□□ -1.73
HDAC9-216ENST00000446646 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
HDAC9-216ENST00000446646 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
HDAC9-216ENST00000446646 IGKCP01834 107 aa4.24□□□□□ -1.73
HDAC9-216ENST00000446646 SCGB1C2P0DMR2 95 aa4.24□□□□□ -1.73
HDAC9-216ENST00000446646 CRYGAP11844 174 aa4.24□□□□□ -1.73
HDAC9-216ENST00000446646 COX17Q14061 63 aa4.24□□□□□ -1.73
HDAC9-216ENST00000446646 C6orf99Q4VX62 202 aa4.24□□□□□ -1.73
HDAC9-216ENST00000446646 LINC01545Q5VT33 79 aa4.24□□□□□ -1.73
HDAC9-216ENST00000446646 MYMXA0A1B0GTQ4 84 aa4.23□□□□□ -1.73
HDAC9-216ENST00000446646 TMEM223A0PJW6 202 aa4.23□□□□□ -1.73
HDAC9-216ENST00000446646 TRACP01848 142 aa4.23□□□□□ -1.73
HDAC9-216ENST00000446646 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms