RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 OCR1Q9BZK8 76 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 Q6ZTC4 211 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 ST20-AS1Q8NBB2 130 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 DEFB131BA0A096LNP1 70 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 NF1P21359 2839 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 TACC2O95359 2948 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 ZNF706Q9Y5V0 76 aaPredicted RBP5.33□□□□□ -1.56
SMG1-202ENST00000446231 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
SMG1-202ENST00000446231 IGLV9-49A0A0B4J1Y8 123 aa5.32□□□□□ -1.56
SMG1-202ENST00000446231 LCA10Q71F78 164 aa5.32□□□□□ -1.56
SMG1-202ENST00000446231 ZANQ9Y493 2812 aa5.32□□□□□ -1.56
SMG1-202ENST00000446231 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.567e-6■□□□□ 10.5
SMG1-202ENST00000446231 COL4A2P08572 1712 aa5.32□□□□□ -1.56
SMG1-202ENST00000446231 KALRNO60229 2985 aa5.31□□□□□ -1.56
SMG1-202ENST00000446231 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
SMG1-202ENST00000446231 IGLV1-51P01701 117 aa5.31□□□□□ -1.56
SMG1-202ENST00000446231 SPINK6Q6UWN8 80 aa5.31□□□□□ -1.56
SMG1-202ENST00000446231 Q6ZRX8 168 aa5.31□□□□□ -1.56
SMG1-202ENST00000446231 TRIOO75962 3097 aa5.31□□□□□ -1.56
SMG1-202ENST00000446231 ACYP2P14621 99 aa5.31□□□□□ -1.56
SMG1-202ENST00000446231 EP400Q96L91 3159 aa5.3□□□□□ -1.56
SMG1-202ENST00000446231 Q6ZRU5 148 aa5.3□□□□□ -1.56
SMG1-202ENST00000446231 DMXL2Q8TDJ6 3036 aa5.3□□□□□ -1.56
SMG1-202ENST00000446231 PRLHP81277 87 aa5.3□□□□□ -1.56
SMG1-202ENST00000446231 C22orf24Q9Y442 160 aa5.3□□□□□ -1.56
SMG1-202ENST00000446231 PCNTO95613 3336 aa5.29□□□□□ -1.56
SMG1-202ENST00000446231 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
SMG1-202ENST00000446231 FAM229BQ4G0N7 80 aa5.29□□□□□ -1.56
SMG1-202ENST00000446231 A0A1B0GU69 56 aa5.29□□□□□ -1.56
SMG1-202ENST00000446231 KCNQ1DNQ9H478 68 aa5.28□□□□□ -1.56
SMG1-202ENST00000446231 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
SMG1-202ENST00000446231 EPM2AB3EWF7 344 aa5.28□□□□□ -1.56
SMG1-202ENST00000446231 K7EQZ3 153 aa5.28□□□□□ -1.56
SMG1-202ENST00000446231 LINC00528Q8N1L1 170 aa5.27□□□□□ -1.57
SMG1-202ENST00000446231 A8MWP4 228 aa5.27□□□□□ -1.57
SMG1-202ENST00000446231 A0A096LNT2 108 aa5.27□□□□□ -1.57
SMG1-202ENST00000446231 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
SMG1-202ENST00000446231 FREM2Q5SZK8 3169 aa5.26□□□□□ -1.57
SMG1-202ENST00000446231 LINC00476Q8WZB0 136 aa5.26□□□□□ -1.57
SMG1-202ENST00000446231 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
SMG1-202ENST00000446231 Q75L30 129 aa5.25□□□□□ -1.57
SMG1-202ENST00000446231 M0R2N4 97 aa5.24□□□□□ -1.57
SMG1-202ENST00000446231 SPINK1P00995 79 aa5.24□□□□□ -1.57
SMG1-202ENST00000446231 RPL37AP61513 92 aaKnown RBP5.23□□□□□ -1.57
SMG1-202ENST00000446231 Q6ZRP5 223 aa5.23□□□□□ -1.57
SMG1-202ENST00000446231 H3BS24 57 aa5.23□□□□□ -1.57
SMG1-202ENST00000446231 MDFIQ99750 246 aa5.23□□□□□ -1.57
SMG1-202ENST00000446231 FAM168BA1KXE4 195 aa5.22□□□□□ -1.57
SMG1-202ENST00000446231 PDZD2O15018 2839 aa5.22□□□□□ -1.57
SMG1-202ENST00000446231 LINC00588Q9Y4M8 146 aa5.22□□□□□ -1.57
SMG1-202ENST00000446231 FRYLO94915 3013 aa5.22□□□□□ -1.57
SMG1-202ENST00000446231 C16orf95Q9H693 158 aa5.22□□□□□ -1.57
SMG1-202ENST00000446231 Q8N377 158 aa5.21□□□□□ -1.57
SMG1-202ENST00000446231 PRO3102Q9H379 93 aa5.21□□□□□ -1.58
SMG1-202ENST00000446231 LINC01556Q5JQF7 62 aa5.21□□□□□ -1.58
SMG1-202ENST00000446231 X6R8D5 127 aa5.2□□□□□ -1.58
SMG1-202ENST00000446231 IGLV8-61A0A075B6I0 122 aa5.2□□□□□ -1.58
SMG1-202ENST00000446231 CSNK1G2-AS1Q8NCQ2 148 aa5.2□□□□□ -1.58
SMG1-202ENST00000446231 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
SMG1-202ENST00000446231 CRYBG3Q68DQ2 2970 aa5.2□□□□□ -1.58
SMG1-202ENST00000446231 A0A0G2JQZ4 141 aa5.19□□□□□ -1.58
SMG1-202ENST00000446231 A0A1W2PNN7 141 aa5.19□□□□□ -1.58
SMG1-202ENST00000446231 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
SMG1-202ENST00000446231 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
SMG1-202ENST00000446231 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
SMG1-202ENST00000446231 IGKV2-30P06310 120 aa5.18□□□□□ -1.58
SMG1-202ENST00000446231 Q5VV11 94 aa5.18□□□□□ -1.58
SMG1-202ENST00000446231 CIRBP-AS1Q8TBR5 109 aa5.18□□□□□ -1.58
SMG1-202ENST00000446231 DCHS2Q6V1P9 2916 aa5.18□□□□□ -1.58
SMG1-202ENST00000446231 IGFL1Q6UW32 110 aa5.18□□□□□ -1.58
SMG1-202ENST00000446231 VPS13AQ96RL7 3174 aa5.17□□□□□ -1.58
SMG1-202ENST00000446231 KRTAP10-9P60411 292 aa5.16□□□□□ -1.58
SMG1-202ENST00000446231 WDFY4Q6ZS81 3184 aa5.16□□□□□ -1.58
SMG1-202ENST00000446231 GOLGB1Q14789 3259 aaKnown RBP5.16□□□□□ -1.58
SMG1-202ENST00000446231 MOBPQ13875 183 aa5.16□□□□□ -1.58
SMG1-202ENST00000446231 IGLV1-50A0A075B6I6 118 aa5.15□□□□□ -1.58
SMG1-202ENST00000446231 PRAC1Q96KF2 57 aa5.15□□□□□ -1.58
SMG1-202ENST00000446231 PRR34Q9NV39 138 aa5.15□□□□□ -1.58
SMG1-202ENST00000446231 DSCR10P59022 87 aa5.15□□□□□ -1.59
SMG1-202ENST00000446231 FBN2P35556 2912 aa5.14□□□□□ -1.59
SMG1-202ENST00000446231 C16orf90A8MZG2 172 aa5.14□□□□□ -1.59
SMG1-202ENST00000446231 UQCR11O14957 56 aa5.14□□□□□ -1.59
SMG1-202ENST00000446231 J3QKU1 62 aa5.14□□□□□ -1.59
SMG1-202ENST00000446231 LINC00612Q8N6U2 182 aa5.14□□□□□ -1.59
SMG1-202ENST00000446231 C5orf42Q9H799 3197 aa5.14□□□□□ -1.59
SMG1-202ENST00000446231 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
SMG1-202ENST00000446231 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
SMG1-202ENST00000446231 C15orf56Q8N910 161 aa5.12□□□□□ -1.59
SMG1-202ENST00000446231 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
SMG1-202ENST00000446231 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
SMG1-202ENST00000446231 PLA2G2DQ9UNK4 145 aa5.11□□□□□ -1.59
SMG1-202ENST00000446231 IGLV7-46A0A075B6I9 117 aa5.11□□□□□ -1.59
SMG1-202ENST00000446231 IGLV5-48A0A075B6I7 105 aa5.11□□□□□ -1.59
SMG1-202ENST00000446231 ZZEF1O43149 2961 aa5.11□□□□□ -1.59
SMG1-202ENST00000446231 Q8NAQ8 132 aa5.1□□□□□ -1.59
SMG1-202ENST00000446231 RANBP2P49792 3224 aaKnown RBP5.09□□□□□ -1.59
SMG1-202ENST00000446231 TENM1Q9UKZ4 2725 aa5.09□□□□□ -1.59
SMG1-202ENST00000446231 DNAH10OSP0CZ25 163 aa5.09□□□□□ -1.59
SMG1-202ENST00000446231 A0A1B0GVX0 72 aa5.08□□□□□ -1.6
SMG1-202ENST00000446231 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms