RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 KRTAP1-3Q8IUG1 177 aa9.18□□□□□ -0.94
VPS52-212ENST00000445902 HIVEP1P15822 2718 aa9.18□□□□□ -0.94
VPS52-212ENST00000445902 SEC61GP60059 68 aa9.18□□□□□ -0.94
VPS52-212ENST00000445902 PSPHP1O15172 72 aa9.18□□□□□ -0.94
VPS52-212ENST00000445902 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
VPS52-212ENST00000445902 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
VPS52-212ENST00000445902 Q8N377 158 aa9.16□□□□□ -0.94
VPS52-212ENST00000445902 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
VPS52-212ENST00000445902 Q6ZRP5 223 aa9.16□□□□□ -0.94
VPS52-212ENST00000445902 UBR5O95071 2799 aaPredicted RBP9.14□□□□□ -0.95
VPS52-212ENST00000445902 WFDC10BQ8IUB3 73 aa9.14□□□□□ -0.95
VPS52-212ENST00000445902 A0A1W2PNM2 257 aa9.13□□□□□ -0.95
VPS52-212ENST00000445902 ANK3Q12955 4377 aaKnown RBP9.12□□□□□ -0.95
VPS52-212ENST00000445902 EGFEM1PQ0D2K5 195 aa9.12□□□□□ -0.95
VPS52-212ENST00000445902 KRTAP10-3P60369 221 aa9.12□□□□□ -0.95
VPS52-212ENST00000445902 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
VPS52-212ENST00000445902 K7EQZ3 153 aa9.1□□□□□ -0.95
VPS52-212ENST00000445902 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
VPS52-212ENST00000445902 USP24Q9UPU5 2620 aa9.1□□□□□ -0.95
VPS52-212ENST00000445902 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
VPS52-212ENST00000445902 NKAPP1Q8N9T2 125 aa9.1□□□□□ -0.95
VPS52-212ENST00000445902 ST20-AS1Q8NBB2 130 aa9.1□□□□□ -0.95
VPS52-212ENST00000445902 Q8NAQ8 132 aa9.09□□□□□ -0.95
VPS52-212ENST00000445902 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
VPS52-212ENST00000445902 TENM1Q9UKZ4 2725 aa9.09□□□□□ -0.95
VPS52-212ENST00000445902 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
VPS52-212ENST00000445902 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
VPS52-212ENST00000445902 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
VPS52-212ENST00000445902 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
VPS52-212ENST00000445902 A0A0G2JQZ4 141 aa9.08□□□□□ -0.96
VPS52-212ENST00000445902 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
VPS52-212ENST00000445902 ITPR2Q14571 2701 aa9.07□□□□□ -0.96
VPS52-212ENST00000445902 DSCR10P59022 87 aa9.07□□□□□ -0.96
VPS52-212ENST00000445902 DEFB116Q30KQ4 102 aa9.07□□□□□ -0.96
VPS52-212ENST00000445902 TRAV22A0A0B4J277 110 aa9.06□□□□□ -0.96
VPS52-212ENST00000445902 ETDCA0A1B0GVM5 59 aa9.06□□□□□ -0.96
VPS52-212ENST00000445902 A8MU10 97 aa9.06□□□□□ -0.96
VPS52-212ENST00000445902 Q1T7F1 81 aa9.06□□□□□ -0.96
VPS52-212ENST00000445902 PRR15Q8IV56 129 aa9.06□□□□□ -0.96
VPS52-212ENST00000445902 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
VPS52-212ENST00000445902 LCE6AA0A183 80 aa9.05□□□□□ -0.96
VPS52-212ENST00000445902 ZCCHC13Q8WW36 166 aaKnown RBP9.05□□□□□ -0.96
VPS52-212ENST00000445902 Q9BRP9 147 aa9.05□□□□□ -0.96
VPS52-212ENST00000445902 BAHCC1Q9P281 2608 aa9.05□□□□□ -0.96
VPS52-212ENST00000445902 TEP1Q99973 2627 aaKnown RBP9.05□□□□□ -0.96
VPS52-212ENST00000445902 PMAIP1Q13794 54 aa9.05□□□□□ -0.96
VPS52-212ENST00000445902 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
VPS52-212ENST00000445902 IGKV2D-24A0A075B6R9 120 aa9.04□□□□□ -0.96
VPS52-212ENST00000445902 FAM168BA1KXE4 195 aa9.04□□□□□ -0.96
VPS52-212ENST00000445902 APOC4P55056 127 aa9.04□□□□□ -0.96
VPS52-212ENST00000445902 A8MUN3 132 aa9.03□□□□□ -0.96
VPS52-212ENST00000445902 PDZD2O15018 2839 aa9.03□□□□□ -0.96
VPS52-212ENST00000445902 Q8NBF4 154 aa9.03□□□□□ -0.96
VPS52-212ENST00000445902 WFDC13Q8IUB5 93 aa9.02□□□□□ -0.97
VPS52-212ENST00000445902 NOTCH2Q04721 2471 aa9.02□□□□□ -0.97
VPS52-212ENST00000445902 KRTAP1-1Q07627 177 aa9.02□□□□□ -0.97
VPS52-212ENST00000445902 SYCNQ0VAF6 134 aa9.02□□□□□ -0.97
VPS52-212ENST00000445902 Q6ZRX8 168 aa9.01□□□□□ -0.97
VPS52-212ENST00000445902 ATRQ13535 2644 aa9.01□□□□□ -0.97
VPS52-212ENST00000445902 TRRAPQ9Y4A5 3859 aa9□□□□□ -0.97
VPS52-212ENST00000445902 HCG22E2RYF7 251 aa9□□□□□ -0.97
VPS52-212ENST00000445902 PSCAO43653 123 aa8.99□□□□□ -0.97
VPS52-212ENST00000445902 TNP2Q05952 138 aa8.99□□□□□ -0.97
VPS52-212ENST00000445902 DHRS4-AS1Q9P1J3 65 aa8.98□□□□□ -0.97
VPS52-212ENST00000445902 SMR3AQ99954 134 aa8.97□□□□□ -0.97
VPS52-212ENST00000445902 UBE2BP63146 152 aa8.97□□□□□ -0.97
VPS52-212ENST00000445902 RETNQ9HD89 108 aa8.96□□□□□ -0.97
VPS52-212ENST00000445902 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
VPS52-212ENST00000445902 LINC00208Q96KT6 92 aa8.95□□□□□ -0.98
VPS52-212ENST00000445902 TENM3Q9P273 2699 aa8.95□□□□□ -0.98
VPS52-212ENST00000445902 RPL37AP61513 92 aaKnown RBP8.94□□□□□ -0.98
VPS52-212ENST00000445902 CYP4F30PQ9H0H9 118 aa8.94□□□□□ -0.98
VPS52-212ENST00000445902 TENM4Q6N022 2769 aa8.94□□□□□ -0.98
VPS52-212ENST00000445902 OTOGQ6ZRI0 2925 aa8.94□□□□□ -0.98
VPS52-212ENST00000445902 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
VPS52-212ENST00000445902 LINC00476Q8WZB0 136 aa8.93□□□□□ -0.98
VPS52-212ENST00000445902 IGLV1-50A0A075B6I6 118 aa8.93□□□□□ -0.98
VPS52-212ENST00000445902 A0A1B0GW54 56 aa8.92□□□□□ -0.98
VPS52-212ENST00000445902 Q5VV11 94 aa8.91□□□□□ -0.98
VPS52-212ENST00000445902 B9D2Q9BPU9 175 aa8.91□□□□□ -0.98
VPS52-212ENST00000445902 MP68P56378 58 aa8.91□□□□□ -0.98
VPS52-212ENST00000445902 FASNP49327 2511 aaKnown RBP8.91□□□□□ -0.98
VPS52-212ENST00000445902 KRTAP7-1Q8IUC3 87 aa8.91□□□□□ -0.98
VPS52-212ENST00000445902 SRRM2Q9UQ35 2752 aaKnown RBP8.9□□□□□ -0.98
VPS52-212ENST00000445902 A0A087WSZ3 146 aa8.89□□□□□ -0.99
VPS52-212ENST00000445902 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
VPS52-212ENST00000445902 CASC10Q5T4H9 136 aa8.89□□□□□ -0.99
VPS52-212ENST00000445902 NDUFB1O75438 58 aa8.88□□□□□ -0.99
VPS52-212ENST00000445902 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
VPS52-212ENST00000445902 SPRR1AP35321 89 aa8.87□□□□□ -0.99
VPS52-212ENST00000445902 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
VPS52-212ENST00000445902 PRR15LQ9BU68 103 aa8.87□□□□□ -0.99
VPS52-212ENST00000445902 HELZ2Q9BYK8 2649 aaKnown RBP8.86□□□□□ -0.99
VPS52-212ENST00000445902 H0Y9P7 68 aa8.85□□□□□ -0.99
VPS52-212ENST00000445902 MRPL55Q7Z7F7 128 aaKnown RBP8.85□□□□□ -0.99
VPS52-212ENST00000445902 PRLHP81277 87 aa8.84□□□□□ -0.99
VPS52-212ENST00000445902 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
VPS52-212ENST00000445902 LINC01556Q5JQF7 62 aa8.83□□□□□ -1
VPS52-212ENST00000445902 C16orf90A8MZG2 172 aa8.83□□□□□ -1
VPS52-212ENST00000445902 FLNBO75369 2602 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms