RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 A0A087X002 238 aa8.3□□□□□ -1.08
TREX1-202ENST00000444177 PRYO14603 147 aa8.3□□□□□ -1.08
TREX1-202ENST00000444177 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
TREX1-202ENST00000444177 CRYGAP11844 174 aa8.29□□□□□ -1.08
TREX1-202ENST00000444177 S100A12P80511 92 aa8.29□□□□□ -1.08
TREX1-202ENST00000444177 LINC00518Q8N0U6 118 aa8.29□□□□□ -1.08
TREX1-202ENST00000444177 HIGD2AQ9BW72 106 aa8.29□□□□□ -1.08
TREX1-202ENST00000444177 ANAPC11Q9NYG5 84 aa8.29□□□□□ -1.08
TREX1-202ENST00000444177 CBY1Q9Y3M2 126 aa8.29□□□□□ -1.08
TREX1-202ENST00000444177 TRBV10-3A0A0K0K1G6 114 aa8.28□□□□□ -1.08
TREX1-202ENST00000444177 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
TREX1-202ENST00000444177 TYMSOSQ8TAI1 123 aa8.28□□□□□ -1.08
TREX1-202ENST00000444177 DDTP30046 118 aa8.27□□□□□ -1.09
TREX1-202ENST00000444177 SPRR1AP35321 89 aa8.27□□□□□ -1.09
TREX1-202ENST00000444177 S100A7L2Q5SY68 101 aa8.27□□□□□ -1.09
TREX1-202ENST00000444177 SLC25A34Q6PIV7 304 aa8.27□□□□□ -1.09
TREX1-202ENST00000444177 HIGD1BQ9P298 99 aa8.27□□□□□ -1.09
TREX1-202ENST00000444177 ETDCA0A1B0GVM5 59 aa8.26□□□□□ -1.09
TREX1-202ENST00000444177 MUSTN1Q8IVN3 82 aa8.26□□□□□ -1.09
TREX1-202ENST00000444177 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
TREX1-202ENST00000444177 C14orf144Q96I85 54 aa8.26□□□□□ -1.09
TREX1-202ENST00000444177 PRR4Q16378 134 aa8.25□□□□□ -1.09
TREX1-202ENST00000444177 FAM229BQ4G0N7 80 aa8.24□□□□□ -1.09
TREX1-202ENST00000444177 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
TREX1-202ENST00000444177 KRTAP13-2Q52LG2 175 aa8.23□□□□□ -1.09
TREX1-202ENST00000444177 TRAV23DV6A0A075B6W5 121 aa8.22□□□□□ -1.09
TREX1-202ENST00000444177 TSPAN13O95857 204 aa8.22□□□□□ -1.09
TREX1-202ENST00000444177 HIST1H4GQ99525 98 aa8.22□□□□□ -1.09
TREX1-202ENST00000444177 SMIM6P0DI80 62 aa8.21□□□□□ -1.1
TREX1-202ENST00000444177 C2orf91Q6ZV80 131 aa8.21□□□□□ -1.1
TREX1-202ENST00000444177 ZNF706Q9Y5V0 76 aaPredicted RBP8.21□□□□□ -1.1
TREX1-202ENST00000444177 TRAV13-2A0A0B4J235 113 aa8.2□□□□□ -1.1
TREX1-202ENST00000444177 TAL2Q16559 108 aa8.2□□□□□ -1.1
TREX1-202ENST00000444177 OR13C6PQ8NH95 151 aa8.2□□□□□ -1.1
TREX1-202ENST00000444177 SPRR4Q96PI1 79 aa8.2□□□□□ -1.1
TREX1-202ENST00000444177 B5MCH6 92 aa8.19□□□□□ -1.1
TREX1-202ENST00000444177 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
TREX1-202ENST00000444177 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
TREX1-202ENST00000444177 A4D1N5 150 aa8.18□□□□□ -1.1
TREX1-202ENST00000444177 HINT1P49773 126 aaPredicted RBP8.17□□□□□ -1.1
TREX1-202ENST00000444177 Q6ZRX8 168 aa8.17□□□□□ -1.1
TREX1-202ENST00000444177 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
TREX1-202ENST00000444177 LINC00304Q8N9R0 145 aa8.17□□□□□ -1.1
TREX1-202ENST00000444177 UQCR10Q9UDW1 63 aa8.17□□□□□ -1.1
TREX1-202ENST00000444177 LOC105371267A0A1B0GV96 52 aa8.16□□□□□ -1.1
TREX1-202ENST00000444177 A6NDN8 102 aa8.16□□□□□ -1.1
TREX1-202ENST00000444177 MUC2Q02817 5179 aa8.15□□□□□ -1.1
TREX1-202ENST00000444177 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.1
TREX1-202ENST00000444177 Q9BRP9 147 aa8.14□□□□□ -1.11
TREX1-202ENST00000444177 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
TREX1-202ENST00000444177 A6NJY4 79 aa8.13□□□□□ -1.11
TREX1-202ENST00000444177 ERC2-IT1O76042 136 aa8.13□□□□□ -1.11
TREX1-202ENST00000444177 HSD52Q0P140 79 aa8.13□□□□□ -1.11
TREX1-202ENST00000444177 GAGE2AQ6NT46 116 aa8.13□□□□□ -1.11
TREX1-202ENST00000444177 CEND1Q8N111 149 aa8.13□□□□□ -1.11
TREX1-202ENST00000444177 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
TREX1-202ENST00000444177 C6orf99Q4VX62 202 aa8.12□□□□□ -1.11
TREX1-202ENST00000444177 A0A0B4J2C4 111 aa8.11□□□□□ -1.11
TREX1-202ENST00000444177 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
TREX1-202ENST00000444177 A0A1B0GWB2 263 aa8.1□□□□□ -1.11
TREX1-202ENST00000444177 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
TREX1-202ENST00000444177 CFC1P0CG37 223 aa8.1□□□□□ -1.11
TREX1-202ENST00000444177 COX7BP24311 80 aa8.1□□□□□ -1.11
TREX1-202ENST00000444177 SMIM11BQ8TCY0 68 aa8.1□□□□□ -1.11
TREX1-202ENST00000444177 DHRS4-AS1Q9P1J3 65 aa8.1□□□□□ -1.11
TREX1-202ENST00000444177 RETNLBQ9BQ08 111 aa8.09□□□□□ -1.11
TREX1-202ENST00000444177 IGLV9-49A0A0B4J1Y8 123 aa8.08□□□□□ -1.12
TREX1-202ENST00000444177 Q8NBF4 154 aa8.08□□□□□ -1.12
TREX1-202ENST00000444177 RAB37Q96AX2 223 aa8.08□□□□□ -1.12
TREX1-202ENST00000444177 C12orf57Q99622 126 aa8.08□□□□□ -1.12
TREX1-202ENST00000444177 FXYD2P54710 66 aa8.07□□□□□ -1.12
TREX1-202ENST00000444177 MOBPQ13875 183 aa8.07□□□□□ -1.12
TREX1-202ENST00000444177 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
TREX1-202ENST00000444177 VAMP3Q15836 100 aa8.06□□□□□ -1.12
TREX1-202ENST00000444177 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
TREX1-202ENST00000444177 ST20-AS1Q8NBB2 130 aa8.06□□□□□ -1.12
TREX1-202ENST00000444177 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
TREX1-202ENST00000444177 NHP2Q9NX24 153 aaKnown RBP8.05□□□□□ -1.12
TREX1-202ENST00000444177 PRO1854Q9UHT4 67 aa8.05□□□□□ -1.12
TREX1-202ENST00000444177 TSTD3H0UI37 97 aa8.04□□□□□ -1.12
TREX1-202ENST00000444177 CTAG1AP78358 180 aa8.04□□□□□ -1.12
TREX1-202ENST00000444177 BVES-AS1Q5T3Y7 98 aa8.04□□□□□ -1.12
TREX1-202ENST00000444177 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
TREX1-202ENST00000444177 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
TREX1-202ENST00000444177 SLC25A20O43772 301 aa8.01□□□□□ -1.13
TREX1-202ENST00000444177 SPRR1BP22528 89 aa8.01□□□□□ -1.13
TREX1-202ENST00000444177 SSBP3-AS1Q7Z2R9 100 aa8□□□□□ -1.13
TREX1-202ENST00000444177 A0A0U1RQV1 116 aa7.99□□□□□ -1.13
TREX1-202ENST00000444177 H0YGX0 51 aa7.99□□□□□ -1.13
TREX1-202ENST00000444177 M0R143 59 aa7.99□□□□□ -1.13
TREX1-202ENST00000444177 SPINK1P00995 79 aa7.99□□□□□ -1.13
TREX1-202ENST00000444177 LINC00575Q6W349 94 aa7.99□□□□□ -1.13
TREX1-202ENST00000444177 H7C2G1 150 aa7.98□□□□□ -1.13
TREX1-202ENST00000444177 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
TREX1-202ENST00000444177 Q1RN00 199 aa7.98□□□□□ -1.13
TREX1-202ENST00000444177 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
TREX1-202ENST00000444177 IGLV5-48A0A075B6I7 105 aa7.97□□□□□ -1.13
TREX1-202ENST00000444177 hADV29S1A0JD25 119 aa7.97□□□□□ -1.13
TREX1-202ENST00000444177 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
TREX1-202ENST00000444177 TEX49A0A1B0GTD5 131 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms