RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 LINC00304Q8N9R0 145 aa12.4□□□□□ -0.42
HNF4A-205ENST00000443598 PRR4Q16378 134 aa12.4□□□□□ -0.42
HNF4A-205ENST00000443598 S100A7L2Q5SY68 101 aa12.4□□□□□ -0.42
HNF4A-205ENST00000443598 LITAFQ99732 161 aa12.4□□□□□ -0.42
HNF4A-205ENST00000443598 LPAP08519 4548 aa12.39□□□□□ -0.43
HNF4A-205ENST00000443598 C20orf202A1L168 122 aa12.39□□□□□ -0.43
HNF4A-205ENST00000443598 B5MCH6 92 aa12.39□□□□□ -0.43
HNF4A-205ENST00000443598 SMCR5Q8TEV8 140 aa12.39□□□□□ -0.43
HNF4A-205ENST00000443598 ZNF815PA8K554 130 aa12.37□□□□□ -0.43
HNF4A-205ENST00000443598 EIF4EBP3O60516 100 aaPredicted RBP12.37□□□□□ -0.43
HNF4A-205ENST00000443598 NPC2P61916 151 aa12.37□□□□□ -0.43
HNF4A-205ENST00000443598 TSTD3H0UI37 97 aa12.37□□□□□ -0.43
HNF4A-205ENST00000443598 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
HNF4A-205ENST00000443598 SPANXCQ9NY87 97 aa12.36□□□□□ -0.43
HNF4A-205ENST00000443598 C3orf22Q8N5N4 141 aa12.35□□□□□ -0.43
HNF4A-205ENST00000443598 CBY1Q9Y3M2 126 aa12.35□□□□□ -0.43
HNF4A-205ENST00000443598 Q6ZRX8 168 aa12.34□□□□□ -0.43
HNF4A-205ENST00000443598 RNF213Q63HN8 5207 aa12.34□□□□□ -0.43
HNF4A-205ENST00000443598 TRAV23DV6A0A075B6W5 121 aa12.33□□□□□ -0.43
HNF4A-205ENST00000443598 TTTY13Q9BZ97 58 aa12.33□□□□□ -0.44
HNF4A-205ENST00000443598 LINC00483Q53H64 154 aa12.32□□□□□ -0.44
HNF4A-205ENST00000443598 Q9BRP9 147 aa12.31□□□□□ -0.44
HNF4A-205ENST00000443598 ZNF73O43830 326 aaPredicted RBP12.3□□□□□ -0.44
HNF4A-205ENST00000443598 SPAG11AQ6PDA7 123 aa12.3□□□□□ -0.44
HNF4A-205ENST00000443598 ERC2-IT1O76042 136 aa12.28□□□□□ -0.44
HNF4A-205ENST00000443598 ANKRD39Q53RE8 183 aa12.28□□□□□ -0.44
HNF4A-205ENST00000443598 SCGB1D4Q6XE38 83 aa12.27□□□□□ -0.44
HNF4A-205ENST00000443598 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.44
HNF4A-205ENST00000443598 PPDPFQ9H3Y8 114 aa12.27□□□□□ -0.44
HNF4A-205ENST00000443598 SCGB1D1O95968 90 aa12.26□□□□□ -0.45
HNF4A-205ENST00000443598 HINT1P49773 126 aaPredicted RBP12.26□□□□□ -0.45
HNF4A-205ENST00000443598 GAGE2AQ6NT46 116 aa12.26□□□□□ -0.45
HNF4A-205ENST00000443598 C14orf144Q96I85 54 aa12.26□□□□□ -0.45
HNF4A-205ENST00000443598 PRO1933Q9H354 126 aa12.26□□□□□ -0.45
HNF4A-205ENST00000443598 ATOH7Q8N100 152 aa12.26□□□□□ -0.45
HNF4A-205ENST00000443598 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
HNF4A-205ENST00000443598 COPS9Q8WXC6 57 aa12.25□□□□□ -0.45
HNF4A-205ENST00000443598 C4orf48Q5BLP8 95 aa12.23□□□□□ -0.45
HNF4A-205ENST00000443598 Q6ZVH6 145 aa12.23□□□□□ -0.45
HNF4A-205ENST00000443598 IFITM1P13164 125 aa12.22□□□□□ -0.45
HNF4A-205ENST00000443598 Q8NBF4 154 aa12.22□□□□□ -0.45
HNF4A-205ENST00000443598 RETNLBQ9BQ08 111 aa12.21□□□□□ -0.46
HNF4A-205ENST00000443598 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
HNF4A-205ENST00000443598 SSBP3-AS1Q7Z2R9 100 aa12.19□□□□□ -0.46
HNF4A-205ENST00000443598 SPINK1P00995 79 aa12.17□□□□□ -0.46
HNF4A-205ENST00000443598 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
HNF4A-205ENST00000443598 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
HNF4A-205ENST00000443598 VAMP8Q9BV40 100 aa12.16□□□□□ -0.46
HNF4A-205ENST00000443598 MOBPQ13875 183 aa12.15□□□□□ -0.46
HNF4A-205ENST00000443598 IGLV7-46A0A075B6I9 117 aa12.15□□□□□ -0.47
HNF4A-205ENST00000443598 ELOF1P60002 83 aaKnown RBP12.14□□□□□ -0.47
HNF4A-205ENST00000443598 TPRXLQ17RH7 258 aa12.14□□□□□ -0.47
HNF4A-205ENST00000443598 HSBP1L1C9JCN9 74 aa12.13□□□□□ -0.47
HNF4A-205ENST00000443598 C6orf99Q4VX62 202 aa12.13□□□□□ -0.47
HNF4A-205ENST00000443598 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
HNF4A-205ENST00000443598 ST20-AS1Q8NBB2 130 aa12.13□□□□□ -0.47
HNF4A-205ENST00000443598 TRBV7-6A0A0J9YX20 115 aa12.12□□□□□ -0.47
HNF4A-205ENST00000443598 COX7BP24311 80 aa12.12□□□□□ -0.47
HNF4A-205ENST00000443598 RPS29P62273 56 aaKnown RBP12.12□□□□□ -0.47
HNF4A-205ENST00000443598 FP248Q71RG6 208 aaPredicted RBP12.12□□□□□ -0.47
HNF4A-205ENST00000443598 SPRR1BP22528 89 aa12.11□□□□□ -0.47
HNF4A-205ENST00000443598 PAM16Q9Y3D7 125 aa12.1□□□□□ -0.47
HNF4A-205ENST00000443598 SLC25A34Q6PIV7 304 aa12.09□□□□□ -0.47
HNF4A-205ENST00000443598 A6NDN8 102 aa12.08□□□□□ -0.48
HNF4A-205ENST00000443598 TRAV13-2A0A0B4J235 113 aa12.07□□□□□ -0.48
HNF4A-205ENST00000443598 M0R143 59 aa12.07□□□□□ -0.48
HNF4A-205ENST00000443598 SPATA45Q537H7 98 aa12.07□□□□□ -0.48
HNF4A-205ENST00000443598 C9orf153Q5TBE3 101 aa12.07□□□□□ -0.48
HNF4A-205ENST00000443598 SNHG12Q9BXW3 62 aa12.07□□□□□ -0.48
HNF4A-205ENST00000443598 A0A1B0GWB2 263 aa12.06□□□□□ -0.48
HNF4A-205ENST00000443598 CDIP1Q9H305 208 aa12.05□□□□□ -0.48
HNF4A-205ENST00000443598 UQCR10Q9UDW1 63 aa12.05□□□□□ -0.48
HNF4A-205ENST00000443598 A4D1N5 150 aa12.02□□□□□ -0.49
HNF4A-205ENST00000443598 Q8N377 158 aa12.02□□□□□ -0.49
HNF4A-205ENST00000443598 LAMTOR3Q9UHA4 124 aa12.02□□□□□ -0.49
HNF4A-205ENST00000443598 A0A1B0GV90 55 aa12□□□□□ -0.49
HNF4A-205ENST00000443598 SLC25A20O43772 301 aa12□□□□□ -0.49
HNF4A-205ENST00000443598 TAL2Q16559 108 aa12□□□□□ -0.49
HNF4A-205ENST00000443598 MUC2Q02817 5179 aa11.99□□□□□ -0.49
HNF4A-205ENST00000443598 TEX49A0A1B0GTD5 131 aa11.98□□□□□ -0.49
HNF4A-205ENST00000443598 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
HNF4A-205ENST00000443598 NHP2Q9NX24 153 aaKnown RBP11.97□□□□□ -0.49
HNF4A-205ENST00000443598 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.5
HNF4A-205ENST00000443598 IGLV5-48A0A075B6I7 105 aa11.95□□□□□ -0.5
HNF4A-205ENST00000443598 COX8AP10176 69 aa11.95□□□□□ -0.5
HNF4A-205ENST00000443598 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
HNF4A-205ENST00000443598 MUC17Q685J3 4493 aa11.94□□□□□ -0.5
HNF4A-205ENST00000443598 DLEU1O43261 78 aa11.93□□□□□ -0.5
HNF4A-205ENST00000443598 LINC01547P58512 204 aaPredicted RBP11.93□□□□□ -0.5
HNF4A-205ENST00000443598 VAMP3Q15836 100 aa11.93□□□□□ -0.5
HNF4A-205ENST00000443598 Q1RN00 199 aa11.91□□□□□ -0.5
HNF4A-205ENST00000443598 SMIM29Q86T20 159 aa11.9□□□□□ -0.5
HNF4A-205ENST00000443598 HIST1H4GQ99525 98 aa11.9□□□□□ -0.5
HNF4A-205ENST00000443598 LIMD2Q9BT23 127 aa11.9□□□□□ -0.5
HNF4A-205ENST00000443598 A0A0U1RQV1 116 aa11.89□□□□□ -0.51
HNF4A-205ENST00000443598 CD164Q04900 197 aa11.89□□□□□ -0.51
HNF4A-205ENST00000443598 COL5A1-AS1Q5SY13 56 aa11.89□□□□□ -0.51
HNF4A-205ENST00000443598 LINC00575Q6W349 94 aa11.86□□□□□ -0.51
HNF4A-205ENST00000443598 HRCT1Q6UXD1 115 aa11.85□□□□□ -0.51
HNF4A-205ENST00000443598 HIGD1BQ9P298 99 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms