RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 NBASA2RRP1 2371 aa3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 ZNF469Q96JG9 3925 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 ZNF407Q9C0G0 2248 aa3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 DOCK10Q96BY6 2186 aa3.04□□□□□ -1.92
HMGB3P9-201ENST00000441799 DIDO1Q9BTC0 2240 aaKnown RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 TRAV21A0A0B4J279 112 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 TRBV10-1A0A0K0K1A3 114 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LINC01547P58512 204 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LYZP61626 148 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LINC00483Q53H64 154 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 HCP5Q6MZN7 132 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LINC00322Q6ZN03 302 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 C15orf56Q8N910 161 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 GAFA1Q96PS6 74 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 LITAFQ99732 161 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 CNFNQ9BYD5 112 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 MRPL36Q9P0J6 103 aaKnown RBP3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 ICE1Q9Y2F5 2266 aa3.03□□□□□ -1.92
HMGB3P9-201ENST00000441799 USF3Q68DE3 2245 aa3.03□□□□□ -1.93
HMGB3P9-201ENST00000441799 DCHS2Q6V1P9 2916 aa3.03□□□□□ -1.93
HMGB3P9-201ENST00000441799 CACNA1DQ01668 2161 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 PRRC2CQ9Y520 2896 aaKnown RBP3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 HIVEP3Q5T1R4 2406 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 RYR3Q15413 4870 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGHV1-3A0A0C4DH29 117 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 H0YGX0 51 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 PDE6GP18545 87 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 WFDC9Q8NEX5 89 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 LINC01006Q8NI28 216 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 Q8TAT8 98 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 TMEM167AQ8TBQ9 72 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 ZNF625Q96I27 306 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 LINC00208Q96KT6 92 aa3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 MAP1AP78559 2803 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGLV4-69A0A075B6H9 119 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 A0A1B0GVY2 172 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 H3BPC8 53 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 KRTAP10-3P60369 221 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 SPAG11BQ08648 103 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 PDE6HQ13956 83 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 DEFB114Q30KQ6 69 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 SPAG11AQ6PDA7 123 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 NTM-AS1Q6ZSK4 140 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 SMIM29Q86T20 159 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 COX7B2Q8TF08 81 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 LINC00167Q96N53 147 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 HIGD2AQ9BW72 106 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 PRR34Q9NV39 138 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 CCDC168Q8NDH2 2452 aa3.01□□□□□ -1.93
HMGB3P9-201ENST00000441799 COL6A5A8TX70 2615 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGKV1D-37A0A075B6S9 117 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 LOC110117498A0A087WWA1 95 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 A0A1W2PNU3 283 aaPredicted RBP3□□□□□ -1.93
HMGB3P9-201ENST00000441799 SMIM1B2RUZ4 78 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGKV1-17P01599 117 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 TLX1NBP0CAT3 122 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 CCL3L1P16619 93 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 HIGD2BQ4VC39 106 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 C1orf137Q5JT78 98 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 LYPD1Q8N2G4 141 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 KNTC1P50748 2209 aa3□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGLV11-55A0A075B6I3 123 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGKV1OR2-108A0A075B7D4 117 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 A8MUU9 505 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 ODF3BA8MYP8 253 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 WT1-ASQ06250 92 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 DEFB113Q30KQ7 82 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 C10orf55Q5SWW7 151 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 RNF5Q99942 180 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 KLK9Q9UKQ9 250 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 CUBNO60494 3623 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 MEGF8Q7Z7M0 2845 aa2.99□□□□□ -1.93
HMGB3P9-201ENST00000441799 PKD1L1Q8TDX9 2849 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 RP1L1Q8IWN7 2480 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 APELAP0DMC3 54 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 MIR7-3HGQ8N6C7 128 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 ZNRD1Q9P1U0 126 aa2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 KMT2CQ8NEZ4 4911 aaKnown RBP2.98□□□□□ -1.93
HMGB3P9-201ENST00000441799 FN1P02751 2386 aaKnown RBP2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 ARHGAP32A7KAX9 2087 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 TET2Q6N021 2002 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 H3BRN7 92 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 PANO1I0J062 215 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 SMIM2Q9BVW6 85 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 KAAG1Q9UBP8 84 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 MXRA5Q9NR99 2828 aa2.97□□□□□ -1.93
HMGB3P9-201ENST00000441799 PRAC2D3DTV9 90 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 H3BQ85 93 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 SPINK7P58062 85 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 C9orf129Q5T035 196 aaKnown RBP2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 JMJD1CQ15652 2540 aa2.96□□□□□ -1.94
HMGB3P9-201ENST00000441799 PRRC2AP48634 2157 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 542.9 ms