RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
NEK1-201ENST00000439128 A0A1B0GW54 56 aa7.87□□□□□ -1.15
NEK1-201ENST00000439128 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
NEK1-201ENST00000439128 USP24Q9UPU5 2620 aa7.86□□□□□ -1.15
NEK1-201ENST00000439128 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
NEK1-201ENST00000439128 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
NEK1-201ENST00000439128 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
NEK1-201ENST00000439128 Q6ZQT0 140 aa7.85□□□□□ -1.15
NEK1-201ENST00000439128 TRBV7-4A0A0J9YYF1 115 aa7.85□□□□□ -1.15
NEK1-201ENST00000439128 TLX1NBP0CAT3 122 aa7.84□□□□□ -1.15
NEK1-201ENST00000439128 A0A1B0GU69 56 aa7.83□□□□□ -1.16
NEK1-201ENST00000439128 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
NEK1-201ENST00000439128 A8MWP4 228 aa7.83□□□□□ -1.16
NEK1-201ENST00000439128 IGFL1Q6UW32 110 aa7.83□□□□□ -1.16
NEK1-201ENST00000439128 TRAV22A0A0B4J277 110 aa7.82□□□□□ -1.16
NEK1-201ENST00000439128 M0R2T5 61 aa7.82□□□□□ -1.16
NEK1-201ENST00000439128 LOC110117498A0A087WWA1 95 aa7.81□□□□□ -1.16
NEK1-201ENST00000439128 DNAH12Q6ZR08 3092 aa7.81□□□□□ -1.16
NEK1-201ENST00000439128 PSPHP1O15172 72 aa7.8□□□□□ -1.16
NEK1-201ENST00000439128 A0A0G2JQZ4 141 aa7.8□□□□□ -1.16
NEK1-201ENST00000439128 FLNAP21333 2647 aaKnown RBP7.79□□□□□ -1.16
NEK1-201ENST00000439128 IGLV7-46A0A075B6I9 117 aa7.79□□□□□ -1.16
NEK1-201ENST00000439128 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
NEK1-201ENST00000439128 PLA2G2DQ9UNK4 145 aa7.79□□□□□ -1.16
NEK1-201ENST00000439128 ITPR3Q14573 2671 aa7.79□□□□□ -1.16
NEK1-201ENST00000439128 LCE6AA0A183 80 aa7.79□□□□□ -1.16
NEK1-201ENST00000439128 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
NEK1-201ENST00000439128 Q6ZSA8 131 aa7.78□□□□□ -1.16
NEK1-201ENST00000439128 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
NEK1-201ENST00000439128 SMIM26A0A096LP01 95 aa7.77□□□□□ -1.17
NEK1-201ENST00000439128 LOC101927531A0A1B0GV80 90 aa7.76□□□□□ -1.17
NEK1-201ENST00000439128 CEP350Q5VT06 3117 aa7.76□□□□□ -1.17
NEK1-201ENST00000439128 K7EQZ3 153 aa7.76□□□□□ -1.17
NEK1-201ENST00000439128 LITAFQ99732 161 aa7.76□□□□□ -1.17
NEK1-201ENST00000439128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
NEK1-201ENST00000439128 WIPF1O43516 503 aa7.75□□□□□ -1.17
NEK1-201ENST00000439128 C8orf17Q9NRJ1 99 aa7.75□□□□□ -1.17
NEK1-201ENST00000439128 MAST4O15021 2626 aa7.75□□□□□ -1.17
NEK1-201ENST00000439128 CFAP46Q8IYW2 2715 aa7.74□□□□□ -1.17
NEK1-201ENST00000439128 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
NEK1-201ENST00000439128 Q5VSD8 79 aa7.73□□□□□ -1.17
NEK1-201ENST00000439128 Q8N377 158 aa7.72□□□□□ -1.17
NEK1-201ENST00000439128 H3BPC8 53 aa7.72□□□□□ -1.17
NEK1-201ENST00000439128 ATRQ13535 2644 aa7.72□□□□□ -1.17
NEK1-201ENST00000439128 ERC2-IT1O76042 136 aa7.71□□□□□ -1.18
NEK1-201ENST00000439128 CR1P17927 2039 aa7.68□□□□□ -1.18
NEK1-201ENST00000439128 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
NEK1-201ENST00000439128 PRR15Q8IV56 129 aa7.67□□□□□ -1.18
NEK1-201ENST00000439128 EIF4EBP3O60516 100 aaPredicted RBP7.65□□□□□ -1.18
NEK1-201ENST00000439128 PMAIP1Q13794 54 aa7.65□□□□□ -1.19
NEK1-201ENST00000439128 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
NEK1-201ENST00000439128 BPTFQ12830 3046 aa7.64□□□□□ -1.19
NEK1-201ENST00000439128 BAHCC1Q9P281 2608 aa7.63□□□□□ -1.19
NEK1-201ENST00000439128 PRRC2CQ9Y520 2896 aaKnown RBP7.63□□□□□ -1.19
NEK1-201ENST00000439128 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
NEK1-201ENST00000439128 C5orf42Q9H799 3197 aa7.6□□□□□ -1.19
NEK1-201ENST00000439128 CHD7Q9P2D1 2997 aa7.6□□□□□ -1.19
NEK1-201ENST00000439128 SETXQ7Z333 2677 aaKnown RBP7.59□□□□□ -1.19
NEK1-201ENST00000439128 Q8N1X5 172 aa7.58□□□□□ -1.2
NEK1-201ENST00000439128 IGLV5-48A0A075B6I7 105 aa7.57□□□□□ -1.2
NEK1-201ENST00000439128 LINC01600Q96MT4 127 aa7.57□□□□□ -1.2
NEK1-201ENST00000439128 TEP1Q99973 2627 aaKnown RBP7.57□□□□□ -1.2
NEK1-201ENST00000439128 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
NEK1-201ENST00000439128 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
NEK1-201ENST00000439128 KRTAP10-2P60368 255 aa7.56□□□□□ -1.2
NEK1-201ENST00000439128 CD164Q04900 197 aa7.55□□□□□ -1.2
NEK1-201ENST00000439128 PRO0461Q9UI25 63 aa7.53□□□□□ -1.2
NEK1-201ENST00000439128 KRTAP1-5Q9BYS1 174 aa7.53□□□□□ -1.2
NEK1-201ENST00000439128 C1orf195Q5TG92 126 aa7.52□□□□□ -1.21
NEK1-201ENST00000439128 COA5Q86WW8 74 aa7.52□□□□□ -1.21
NEK1-201ENST00000439128 A0A1W2PNM2 257 aa7.51□□□□□ -1.21
NEK1-201ENST00000439128 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
NEK1-201ENST00000439128 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
NEK1-201ENST00000439128 A0A0D9SG42 100 aa7.49□□□□□ -1.21
NEK1-201ENST00000439128 RANBP2P49792 3224 aaKnown RBP7.47□□□□□ -1.21
NEK1-201ENST00000439128 CHD9Q3L8U1 2897 aa7.46□□□□□ -1.21
NEK1-201ENST00000439128 PCNTO95613 3336 aa7.46□□□□□ -1.22
NEK1-201ENST00000439128 CENPEQ02224 2701 aa7.45□□□□□ -1.22
NEK1-201ENST00000439128 STAB1Q9NY15 2570 aa7.44□□□□□ -1.22
NEK1-201ENST00000439128 KRTAP21-3Q3LHN1 58 aa7.44□□□□□ -1.22
NEK1-201ENST00000439128 HTTP42858 3142 aa7.43□□□□□ -1.22
NEK1-201ENST00000439128 TEX15Q9BXT5 2789 aa7.42□□□□□ -1.22
NEK1-201ENST00000439128 OXTP01178 125 aa7.42□□□□□ -1.22
NEK1-201ENST00000439128 UQCR11O14957 56 aa7.42□□□□□ -1.22
NEK1-201ENST00000439128 FAM104AQ969W3 186 aa7.41□□□□□ -1.22
NEK1-201ENST00000439128 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.23
NEK1-201ENST00000439128 CRIPTQ9P021 101 aa7.39□□□□□ -1.23
NEK1-201ENST00000439128 LAMA3Q16787 3333 aa7.39□□□□□ -1.23
NEK1-201ENST00000439128 C4orf26Q17RF5 130 aa7.39□□□□□ -1.23
NEK1-201ENST00000439128 ZNF292O60281 2723 aa7.39□□□□□ -1.23
NEK1-201ENST00000439128 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
NEK1-201ENST00000439128 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
NEK1-201ENST00000439128 Q6ZR54 194 aa7.36□□□□□ -1.23
NEK1-201ENST00000439128 MGAQ8IWI9 3026 aa7.35□□□□□ -1.23
NEK1-201ENST00000439128 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
NEK1-201ENST00000439128 CSAG1Q6PB30 78 aa7.35□□□□□ -1.23
NEK1-201ENST00000439128 MKI67P46013 3256 aaKnown RBP7.35□□□□□ -1.23
NEK1-201ENST00000439128 S4R3F8 94 aa7.34□□□□□ -1.23
NEK1-201ENST00000439128 UNC79Q9P2D8 2635 aa7.31□□□□□ -1.24
NEK1-201ENST00000439128 AKAP13Q12802 2813 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms