RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PDE6GP18545 87 aa7.86□□□□□ -1.15
TRAPPC9-202ENST00000438773 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
TRAPPC9-202ENST00000438773 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
TRAPPC9-202ENST00000438773 C9orf129Q5T035 196 aaKnown RBP7.85□□□□□ -1.15
TRAPPC9-202ENST00000438773 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
TRAPPC9-202ENST00000438773 NBPF19A0A087WUL8 3843 aa7.85□□□□□ -1.15
TRAPPC9-202ENST00000438773 H0Y9J4 135 aa7.85□□□□□ -1.15
TRAPPC9-202ENST00000438773 C1orf134Q5TEV5 83 aa7.85□□□□□ -1.15
TRAPPC9-202ENST00000438773 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
TRAPPC9-202ENST00000438773 C6orf48Q9UBA6 75 aa7.84□□□□□ -1.15
TRAPPC9-202ENST00000438773 MP68P56378 58 aa7.83□□□□□ -1.16
TRAPPC9-202ENST00000438773 DEFB116Q30KQ4 102 aa7.83□□□□□ -1.16
TRAPPC9-202ENST00000438773 LINC00588Q9Y4M8 146 aa7.83□□□□□ -1.16
TRAPPC9-202ENST00000438773 ZNF469Q96JG9 3925 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC9-202ENST00000438773 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
TRAPPC9-202ENST00000438773 F8WDY8 70 aa7.81□□□□□ -1.16
TRAPPC9-202ENST00000438773 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC9-202ENST00000438773 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
TRAPPC9-202ENST00000438773 DHRS4-AS1Q9P1J3 65 aa7.8□□□□□ -1.16
TRAPPC9-202ENST00000438773 C7orf33Q8WU49 177 aa7.79□□□□□ -1.16
TRAPPC9-202ENST00000438773 Q6ZVQ6 151 aa7.78□□□□□ -1.16
TRAPPC9-202ENST00000438773 WIPF1O43516 503 aa7.78□□□□□ -1.16
TRAPPC9-202ENST00000438773 PRR34Q9NV39 138 aa7.78□□□□□ -1.16
TRAPPC9-202ENST00000438773 DNAH10OSP0CZ25 163 aa7.77□□□□□ -1.17
TRAPPC9-202ENST00000438773 PSPHP1O15172 72 aa7.77□□□□□ -1.17
TRAPPC9-202ENST00000438773 CYSTM1Q9H1C7 97 aa7.77□□□□□ -1.17
TRAPPC9-202ENST00000438773 LINC00575Q6W349 94 aa7.76□□□□□ -1.17
TRAPPC9-202ENST00000438773 LINC00474Q9P2X8 69 aa7.76□□□□□ -1.17
TRAPPC9-202ENST00000438773 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
TRAPPC9-202ENST00000438773 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC9-202ENST00000438773 KIAA0087Q14695 138 aa7.75□□□□□ -1.17
TRAPPC9-202ENST00000438773 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
TRAPPC9-202ENST00000438773 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
TRAPPC9-202ENST00000438773 C4orf48Q5BLP8 95 aa7.74□□□□□ -1.17
TRAPPC9-202ENST00000438773 IGKV4-1P06312 121 aa7.73□□□□□ -1.17
TRAPPC9-202ENST00000438773 SMIM26A0A096LP01 95 aa7.73□□□□□ -1.17
TRAPPC9-202ENST00000438773 IGLV5-52A0A0A0MRZ9 124 aa7.73□□□□□ -1.17
TRAPPC9-202ENST00000438773 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
TRAPPC9-202ENST00000438773 NDUFB1O75438 58 aa7.72□□□□□ -1.17
TRAPPC9-202ENST00000438773 GVQW2A0A096LPI5 108 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC9-202ENST00000438773 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
TRAPPC9-202ENST00000438773 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
TRAPPC9-202ENST00000438773 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
TRAPPC9-202ENST00000438773 CRYGAP11844 174 aa7.7□□□□□ -1.18
TRAPPC9-202ENST00000438773 Q6ZRP5 223 aa7.7□□□□□ -1.18
TRAPPC9-202ENST00000438773 C1orf195Q5TG92 126 aa7.69□□□□□ -1.18
TRAPPC9-202ENST00000438773 NBDYA0A0U1RRE5 68 aa7.69□□□□□ -1.18
TRAPPC9-202ENST00000438773 PRYO14603 147 aa7.69□□□□□ -1.18
TRAPPC9-202ENST00000438773 LINC00167Q96N53 147 aa7.69□□□□□ -1.18
TRAPPC9-202ENST00000438773 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
TRAPPC9-202ENST00000438773 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
TRAPPC9-202ENST00000438773 V9GYY9 64 aa7.68□□□□□ -1.18
TRAPPC9-202ENST00000438773 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
TRAPPC9-202ENST00000438773 PRLHP81277 87 aa7.67□□□□□ -1.18
TRAPPC9-202ENST00000438773 C15orf56Q8N910 161 aa7.67□□□□□ -1.18
TRAPPC9-202ENST00000438773 TENM4Q6N022 2769 aa7.67□□□□□ -1.18
TRAPPC9-202ENST00000438773 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
TRAPPC9-202ENST00000438773 VPREB1P12018 145 aa7.66□□□□□ -1.18
TRAPPC9-202ENST00000438773 KMT2BQ9UMN6 2715 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC9-202ENST00000438773 A6NED7 52 aa7.65□□□□□ -1.19
TRAPPC9-202ENST00000438773 NDUFC1O43677 76 aa7.64□□□□□ -1.19
TRAPPC9-202ENST00000438773 A0A087WSZ3 146 aa7.64□□□□□ -1.19
TRAPPC9-202ENST00000438773 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
TRAPPC9-202ENST00000438773 PCOTHQ58A44 107 aa7.64□□□□□ -1.19
TRAPPC9-202ENST00000438773 IGLV6-57P01721 117 aa7.63□□□□□ -1.19
TRAPPC9-202ENST00000438773 ELOF1P60002 83 aaKnown RBP7.63□□□□□ -1.19
TRAPPC9-202ENST00000438773 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
TRAPPC9-202ENST00000438773 SMIM29Q86T20 159 aa7.62□□□□□ -1.19
TRAPPC9-202ENST00000438773 OBSCN-AS1Q96MR7 158 aa7.62□□□□□ -1.19
TRAPPC9-202ENST00000438773 C16orf90A8MZG2 172 aa7.62□□□□□ -1.19
TRAPPC9-202ENST00000438773 FAM168BA1KXE4 195 aa7.61□□□□□ -1.19
TRAPPC9-202ENST00000438773 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
TRAPPC9-202ENST00000438773 CASC10Q5T4H9 136 aa7.61□□□□□ -1.19
TRAPPC9-202ENST00000438773 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC9-202ENST00000438773 SERTAD4-AS1Q5TG53 156 aa7.61□□□□□ -1.19
TRAPPC9-202ENST00000438773 OXTP01178 125 aa7.59□□□□□ -1.19
TRAPPC9-202ENST00000438773 Q6ZQT0 140 aa7.59□□□□□ -1.19
TRAPPC9-202ENST00000438773 Q9BRP9 147 aa7.59□□□□□ -1.19
TRAPPC9-202ENST00000438773 A0A0G2JQZ4 141 aa7.59□□□□□ -1.19
TRAPPC9-202ENST00000438773 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
TRAPPC9-202ENST00000438773 KRTAP21-3Q3LHN1 58 aa7.59□□□□□ -1.19
TRAPPC9-202ENST00000438773 PHF5AQ7RTV0 110 aaKnown RBP7.59□□□□□ -1.19
TRAPPC9-202ENST00000438773 Q8NDZ9 215 aa7.58□□□□□ -1.2
TRAPPC9-202ENST00000438773 Q6ZRX8 168 aa7.58□□□□□ -1.2
TRAPPC9-202ENST00000438773 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
TRAPPC9-202ENST00000438773 APLNQ9ULZ1 77 aa7.57□□□□□ -1.2
TRAPPC9-202ENST00000438773 ST20-AS1Q8NBB2 130 aa7.57□□□□□ -1.2
TRAPPC9-202ENST00000438773 RETNLBQ9BQ08 111 aa7.56□□□□□ -1.2
TRAPPC9-202ENST00000438773 STAB2Q8WWQ8 2551 aa7.55□□□□□ -1.2
TRAPPC9-202ENST00000438773 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
TRAPPC9-202ENST00000438773 RTL8CO15255 209 aa7.55□□□□□ -1.2
TRAPPC9-202ENST00000438773 VWFP04275 2813 aa7.54□□□□□ -1.2
TRAPPC9-202ENST00000438773 LINC00336Q6ZUF6 198 aa7.54□□□□□ -1.2
TRAPPC9-202ENST00000438773 ATP5EP56381 51 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-202ENST00000438773 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
TRAPPC9-202ENST00000438773 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-202ENST00000438773 KCNQ1DNQ9H478 68 aa7.53□□□□□ -1.2
TRAPPC9-202ENST00000438773 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
TRAPPC9-202ENST00000438773 PDZD2O15018 2839 aa7.53□□□□□ -1.2
TRAPPC9-202ENST00000438773 IGLV1-50A0A075B6I6 118 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms