RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 Q6ZSN1 163 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 Q8N9L7 120 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 LINC00588Q9Y4M8 146 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 SPAG11AQ6PDA7 123 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 LINC00846Q9NV44 126 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 DEFB1P60022 68 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 Q6ZTC4 211 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 NCR3O14931 201 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 C20orf197Q8N268 126 aa2.51□□□□□ -2.01
SHPRH-205ENST00000433355 COX6A2Q02221 97 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 OTOGQ6ZRI0 2925 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 IGLV1-50A0A075B6I6 118 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 Q9BRP9 147 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 Q9HAA7 133 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 ASB16-AS1Q495Z4 193 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 VPS13AQ96RL7 3174 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 COL12A1Q99715 3063 aa2.5□□□□□ -2.01
SHPRH-205ENST00000433355 FBN1P35555 2871 aaKnown RBP2.5□□□□□ -2.01
SHPRH-205ENST00000433355 K7ERS5 55 aa2.49□□□□□ -2.01
SHPRH-205ENST00000433355 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
SHPRH-205ENST00000433355 EDN2P20800 178 aa2.49□□□□□ -2.01
SHPRH-205ENST00000433355 FAM19A1Q7Z5A9 133 aa2.49□□□□□ -2.01
SHPRH-205ENST00000433355 DPH3Q96FX2 82 aa2.49□□□□□ -2.01
SHPRH-205ENST00000433355 C15orf56Q8N910 161 aa2.49□□□□□ -2.01
SHPRH-205ENST00000433355 KRTAP10-9P60411 292 aa2.49□□□□□ -2.01
SHPRH-205ENST00000433355 PRR15Q8IV56 129 aa2.48□□□□□ -2.01
SHPRH-205ENST00000433355 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.48□□□□□ -2.01
SHPRH-205ENST00000433355 PRB1P04280 392 aa2.48□□□□□ -2.01
SHPRH-205ENST00000433355 SMCR5Q8TEV8 140 aa2.48□□□□□ -2.01
SHPRH-205ENST00000433355 CASC2Q6XLA1 102 aa2.48□□□□□ -2.01
SHPRH-205ENST00000433355 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
SHPRH-205ENST00000433355 CLPSL2Q6UWE3 100 aa2.48□□□□□ -2.01
SHPRH-205ENST00000433355 LINC00208Q96KT6 92 aa2.48□□□□□ -2.01
SHPRH-205ENST00000433355 SRRM2Q9UQ35 2752 aaKnown RBP2.47□□□□□ -2.01
SHPRH-205ENST00000433355 SEC61GP60059 68 aa2.47□□□□□ -2.01
SHPRH-205ENST00000433355 C1orf134Q5TEV5 83 aa2.47□□□□□ -2.01
SHPRH-205ENST00000433355 Q6ZRU5 148 aa2.47□□□□□ -2.01
SHPRH-205ENST00000433355 FAM218AQ96MZ4 157 aa2.47□□□□□ -2.01
SHPRH-205ENST00000433355 NDUFS5O43920 106 aa2.47□□□□□ -2.01
SHPRH-205ENST00000433355 BOD1L1Q8NFC6 3051 aa2.47□□□□□ -2.01
SHPRH-205ENST00000433355 C18orf65Q6ZTR6 163 aa2.47□□□□□ -2.01
SHPRH-205ENST00000433355 LCE6AA0A183 80 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 WFDC10AQ9H1F0 79 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 FBN3Q75N90 2809 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 TNP2Q05952 138 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 LINC00483Q53H64 154 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 FAM19A5Q7Z5A7 132 aaPredicted RBP2.46□□□□□ -2.02
SHPRH-205ENST00000433355 WFDC10BQ8IUB3 73 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 C22orf24Q9Y442 160 aa2.46□□□□□ -2.02
SHPRH-205ENST00000433355 SPINK1P00995 79 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 Q1T7F1 81 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 OCR1Q9BZK8 76 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 NANOS2P60321 138 aaKnown RBP2.45□□□□□ -2.02
SHPRH-205ENST00000433355 WWC2-AS2Q96NR7 200 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 C9orf116Q5BN46 136 aaPredicted RBP2.45□□□□□ -2.02
SHPRH-205ENST00000433355 ZNF861PO60384 105 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 DMXL2Q8TDJ6 3036 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 H7BZZ5 65 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 MPLKIPQ8TAP9 179 aa2.45□□□□□ -2.02
SHPRH-205ENST00000433355 EPM2AB3EWF7 344 aa2.44□□□□□ -2.02
SHPRH-205ENST00000433355 KRTAP4-16G5E9R7 235 aaPredicted RBP2.44□□□□□ -2.02
SHPRH-205ENST00000433355 ATP11AUNQ6ZP68 121 aa2.44□□□□□ -2.02
SHPRH-205ENST00000433355 A0A087WSZ3 146 aa2.44□□□□□ -2.02
SHPRH-205ENST00000433355 PLAC8Q9NZF1 115 aa2.44□□□□□ -2.02
SHPRH-205ENST00000433355 IGLV5-52A0A0A0MRZ9 124 aa2.44□□□□□ -2.02
SHPRH-205ENST00000433355 BRK1Q8WUW1 75 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 KRTAP24-1Q3LI83 254 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 LINC00476Q8WZB0 136 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 WDFY4Q6ZS81 3184 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 ACYP2P14621 99 aa2.43□□□□□ -2.02
SHPRH-205ENST00000433355 C5orf42Q9H799 3197 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 WFDC13Q8IUB5 93 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 SPACA4Q8TDM5 124 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 DEFB4AO15263 64 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 C9orf129Q5T035 196 aaKnown RBP2.42□□□□□ -2.02
SHPRH-205ENST00000433355 C1orf64Q8NEQ6 169 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 APLNQ9ULZ1 77 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 IGHV6-1A0A0B4J1U7 121 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 OXLD1Q5BKU9 147 aa2.42□□□□□ -2.02
SHPRH-205ENST00000433355 H0Y9P7 68 aa2.41□□□□□ -2.02
SHPRH-205ENST00000433355 K7EIL1 84 aa2.41□□□□□ -2.02
SHPRH-205ENST00000433355 K7EQZ3 153 aa2.41□□□□□ -2.02
SHPRH-205ENST00000433355 Q6ZR54 194 aa2.4□□□□□ -2.02
SHPRH-205ENST00000433355 PLA2G1BP04054 148 aaKnown RBP2.4□□□□□ -2.02
SHPRH-205ENST00000433355 C7orf65Q6ZTY9 151 aa2.4□□□□□ -2.02
SHPRH-205ENST00000433355 KRTAP26-1Q6PEX3 210 aa2.4□□□□□ -2.03
SHPRH-205ENST00000433355 IGFL1Q6UW32 110 aa2.4□□□□□ -2.03
SHPRH-205ENST00000433355 PSORS1C2Q9UIG4 136 aa2.4□□□□□ -2.03
SHPRH-205ENST00000433355 SLPIP03973 132 aa2.4□□□□□ -2.03
SHPRH-205ENST00000433355 LAMA2P24043 3122 aaKnown RBP2.4□□□□□ -2.03
SHPRH-205ENST00000433355 A0A096LNI7 61 aa2.4□□□□□ -2.03
SHPRH-205ENST00000433355 Q8N377 158 aa2.4□□□□□ -2.03
SHPRH-205ENST00000433355 A0A087WTM6 91 aa2.39□□□□□ -2.03
SHPRH-205ENST00000433355 ADGRG4Q8IZF6 3080 aa2.39□□□□□ -2.03
SHPRH-205ENST00000433355 LINC00472Q9H8W2 130 aa2.39□□□□□ -2.03
SHPRH-205ENST00000433355 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms