RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 REG3GQ6UW15 175 aa16.45■□□□□ 0.22
TMEM248-205ENST00000433271 PSMB2P49721 201 aa16.45■□□□□ 0.22
TMEM248-205ENST00000433271 SPRR1AP35321 89 aa16.44■□□□□ 0.22
TMEM248-205ENST00000433271 DIRC1Q969H9 104 aa16.44■□□□□ 0.22
TMEM248-205ENST00000433271 TRIAP1O43715 76 aa16.43■□□□□ 0.22
TMEM248-205ENST00000433271 NAA38Q9BRA0 125 aaKnown RBP16.43■□□□□ 0.22
TMEM248-205ENST00000433271 H3BUT2 72 aa16.41■□□□□ 0.22
TMEM248-205ENST00000433271 KRTAP4-16G5E9R7 235 aaPredicted RBP16.4■□□□□ 0.22
TMEM248-205ENST00000433271 TRBV7-6A0A0J9YX20 115 aa16.39■□□□□ 0.21
TMEM248-205ENST00000433271 COX6CP09669 75 aa16.39■□□□□ 0.21
TMEM248-205ENST00000433271 VAMP3Q15836 100 aa16.39■□□□□ 0.21
TMEM248-205ENST00000433271 PSORS1C2Q9UIG4 136 aa16.38■□□□□ 0.21
TMEM248-205ENST00000433271 CDK2AP2O75956 126 aa16.37■□□□□ 0.21
TMEM248-205ENST00000433271 ETDCA0A1B0GVM5 59 aa16.36■□□□□ 0.21
TMEM248-205ENST00000433271 SCGB1C2P0DMR2 95 aa16.36■□□□□ 0.21
TMEM248-205ENST00000433271 APOBP04114 4563 aaKnown RBP16.35■□□□□ 0.21
TMEM248-205ENST00000433271 H0YGX0 51 aa16.34■□□□□ 0.21
TMEM248-205ENST00000433271 BCE1O60756 84 aa16.34■□□□□ 0.21
TMEM248-205ENST00000433271 ELOF1P60002 83 aaKnown RBP16.34■□□□□ 0.21
TMEM248-205ENST00000433271 B5MCH6 92 aa16.34■□□□□ 0.21
TMEM248-205ENST00000433271 COX7BP24311 80 aa16.34■□□□□ 0.21
TMEM248-205ENST00000433271 A0A1W2PPM0 123 aa16.33■□□□□ 0.2
TMEM248-205ENST00000433271 EPPK1P58107 5090 aaKnown RBP16.33■□□□□ 0.2
TMEM248-205ENST00000433271 C1orf137Q5JT78 98 aa16.31■□□□□ 0.2
TMEM248-205ENST00000433271 Q6ZRX8 168 aa16.31■□□□□ 0.2
TMEM248-205ENST00000433271 FAM19A1Q7Z5A9 133 aa16.31■□□□□ 0.2
TMEM248-205ENST00000433271 LYRM7Q5U5X0 104 aa16.3■□□□□ 0.2
TMEM248-205ENST00000433271 FABP2P12104 132 aa16.3■□□□□ 0.2
TMEM248-205ENST00000433271 LINC00528Q8N1L1 170 aa16.3■□□□□ 0.2
TMEM248-205ENST00000433271 SMR3BP02814 79 aaPredicted RBP16.28■□□□□ 0.2
TMEM248-205ENST00000433271 H0Y9J4 135 aa16.27■□□□□ 0.2
TMEM248-205ENST00000433271 CLEC2BQ92478 149 aa16.27■□□□□ 0.19
TMEM248-205ENST00000433271 UBE2AP49459 152 aa16.26■□□□□ 0.19
TMEM248-205ENST00000433271 PRLHP81277 87 aa16.26■□□□□ 0.19
TMEM248-205ENST00000433271 LINC00575Q6W349 94 aa16.26■□□□□ 0.19
TMEM248-205ENST00000433271 KRTAP13-1Q8IUC0 172 aa16.24■□□□□ 0.19
TMEM248-205ENST00000433271 FAM218AQ96MZ4 157 aa16.24■□□□□ 0.19
TMEM248-205ENST00000433271 INAFM2P0DMQ5 153 aa16.23■□□□□ 0.19
TMEM248-205ENST00000433271 Q9BRP9 147 aa16.23■□□□□ 0.19
TMEM248-205ENST00000433271 DHRS4-AS1Q9P1J3 65 aa16.23■□□□□ 0.19
TMEM248-205ENST00000433271 TRBV20-1A0A075B6N2 111 aa16.22■□□□□ 0.19
TMEM248-205ENST00000433271 SLC25A20O43772 301 aa16.22■□□□□ 0.19
TMEM248-205ENST00000433271 IGLV7-43P04211 117 aa16.22■□□□□ 0.19
TMEM248-205ENST00000433271 TCL1BO95988 128 aa16.21■□□□□ 0.19
TMEM248-205ENST00000433271 RPL37AP61513 92 aaKnown RBP16.2■□□□□ 0.18
TMEM248-205ENST00000433271 A0A1B0GX51 115 aa16.19■□□□□ 0.18
TMEM248-205ENST00000433271 LST1O00453 97 aa16.19■□□□□ 0.18
TMEM248-205ENST00000433271 hADV29S1A0JD25 119 aa16.19■□□□□ 0.18
TMEM248-205ENST00000433271 SNCGO76070 127 aa16.19■□□□□ 0.18
TMEM248-205ENST00000433271 SPCS1Q9Y6A9 102 aa16.19■□□□□ 0.18
TMEM248-205ENST00000433271 ZNF861PO60384 105 aa16.18■□□□□ 0.18
TMEM248-205ENST00000433271 ATXN8Q156A1 80 aa16.18■□□□□ 0.18
TMEM248-205ENST00000433271 SMCR5Q8TEV8 140 aa16.18■□□□□ 0.18
TMEM248-205ENST00000433271 HIGD2AQ9BW72 106 aa16.17■□□□□ 0.18
TMEM248-205ENST00000433271 TRACP01848 142 aa16.14■□□□□ 0.17
TMEM248-205ENST00000433271 ERC2-IT1O76042 136 aa16.12■□□□□ 0.17
TMEM248-205ENST00000433271 HSPG2P98160 4391 aa16.12■□□□□ 0.17
TMEM248-205ENST00000433271 VPS13BQ7Z7G8 4022 aa16.12■□□□□ 0.17
TMEM248-205ENST00000433271 FAM229AH3BQW9 127 aa16.12■□□□□ 0.17
TMEM248-205ENST00000433271 K7EP34 96 aa16.12■□□□□ 0.17
TMEM248-205ENST00000433271 SRRM2Q9UQ35 2752 aaKnown RBP16.11■□□□□ 0.17
TMEM248-205ENST00000433271 A0A1B0GV90 55 aa16.11■□□□□ 0.17
TMEM248-205ENST00000433271 DNAL4O96015 105 aa16.09■□□□□ 0.17
TMEM248-205ENST00000433271 H3BMG7 143 aa16.08■□□□□ 0.17
TMEM248-205ENST00000433271 KRTAP10-4P60372 401 aaPredicted RBP16.08■□□□□ 0.17
TMEM248-205ENST00000433271 GTF2H5Q6ZYL4 71 aa16.08■□□□□ 0.17
TMEM248-205ENST00000433271 KIAA1109Q2LD37 5005 aa16.08■□□□□ 0.17
TMEM248-205ENST00000433271 RYR1P21817 5038 aa16.08■□□□□ 0.16
TMEM248-205ENST00000433271 FAT1Q14517 4588 aa16.08■□□□□ 0.16
TMEM248-205ENST00000433271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.08■□□□□ 0.16
TMEM248-205ENST00000433271 Q6ZQY7 126 aa16.08■□□□□ 0.16
TMEM248-205ENST00000433271 PLA2G1BP04054 148 aaKnown RBP16.07■□□□□ 0.16
TMEM248-205ENST00000433271 ST20-AS1Q8NBB2 130 aa16.03■□□□□ 0.16
TMEM248-205ENST00000433271 Q5VSD8 79 aa16.02■□□□□ 0.16
TMEM248-205ENST00000433271 OCIAD2Q56VL3 154 aa16.01■□□□□ 0.15
TMEM248-205ENST00000433271 C9JAW5 83 aa16■□□□□ 0.15
TMEM248-205ENST00000433271 Q8N1X5 172 aa16■□□□□ 0.15
TMEM248-205ENST00000433271 ORMDL1Q9P0S3 153 aa16■□□□□ 0.15
TMEM248-205ENST00000433271 SPINK6Q6UWN8 80 aa15.99■□□□□ 0.15
TMEM248-205ENST00000433271 IGLV5-48A0A075B6I7 105 aa15.98■□□□□ 0.15
TMEM248-205ENST00000433271 GHRHP01286 108 aa15.97■□□□□ 0.15
TMEM248-205ENST00000433271 DEFB105AQ8NG35 78 aa15.97■□□□□ 0.15
TMEM248-205ENST00000433271 ZNF706Q9Y5V0 76 aaPredicted RBP15.97■□□□□ 0.15
TMEM248-205ENST00000433271 LINC01547P58512 204 aaPredicted RBP15.97■□□□□ 0.15
TMEM248-205ENST00000433271 KRTAP17-1Q9BYP8 105 aa15.97■□□□□ 0.15
TMEM248-205ENST00000433271 UBE2V1Q13404 147 aa15.95■□□□□ 0.14
TMEM248-205ENST00000433271 SPRR4Q96PI1 79 aa15.95■□□□□ 0.14
TMEM248-205ENST00000433271 H3BQ85 93 aa15.94■□□□□ 0.14
TMEM248-205ENST00000433271 BAALC-AS2P0C853 105 aa15.94■□□□□ 0.14
TMEM248-205ENST00000433271 TEX49A0A1B0GTD5 131 aa15.94■□□□□ 0.14
TMEM248-205ENST00000433271 Q8N377 158 aa15.94■□□□□ 0.14
TMEM248-205ENST00000433271 PPDPFLQ8WWR9 84 aa15.94■□□□□ 0.14
TMEM248-205ENST00000433271 GAGE2AQ6NT46 116 aa15.93■□□□□ 0.14
TMEM248-205ENST00000433271 TMEM256-PLSCR3K7ERE1 68 aa15.92■□□□□ 0.14
TMEM248-205ENST00000433271 MTURNQ8N3F0 131 aa15.92■□□□□ 0.14
TMEM248-205ENST00000433271 BIRC6Q9NR09 4857 aa15.91■□□□□ 0.14
TMEM248-205ENST00000433271 SPRR1BP22528 89 aa15.9■□□□□ 0.14
TMEM248-205ENST00000433271 PRO0461Q9UI25 63 aa15.9■□□□□ 0.14
TMEM248-205ENST00000433271 LINC00483Q53H64 154 aa15.89■□□□□ 0.13
TMEM248-205ENST00000433271 H3BT86 120 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms