RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FAM74A4Q5TZK3 123 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 CLPSL2Q6UWE3 100 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 PATE2Q6UY27 113 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 SOSTDC1Q6X4U4 206 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 PHF5AQ7RTV0 110 aaKnown RBP0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 STX12Q86Y82 276 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 C8orf59Q8N0T1 100 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 FAM107BQ9H098 131 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 C14orf132Q9NPU4 83 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 TPRKBQ9Y3C4 175 aa0.9□□□□□ -2.27
HMGB1P27-201ENST00000431429 USH2AO75445 5202 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 IGKV2-40A0A087WW87 121 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 TRBV6-1A0A0K0K1D8 114 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 DUXBA0A1W2PPF3 345 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 TMEM256-PLSCR3K7ERE1 68 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 NDUFC2O95298 119 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 IGKV2D-40P01614 121 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 IAPPP10997 89 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 TPT1P13693 172 aaKnown RBP0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 KRTAP19-6Q3LI70 58 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 SCGB2B2Q4G0G5 96 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 AKR1C8PQ5T2L2 129 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 SMIM20Q8N5G0 67 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 NUP35Q8NFH5 326 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 KRTAP4-1Q9BYQ7 146 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 FXYD6Q9H0Q3 95 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 NAA60Q9H7X0 242 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 PSENENQ9NZ42 101 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 SS18L2Q9UHA2 77 aa0.89□□□□□ -2.27
HMGB1P27-201ENST00000431429 C20orf202A1L168 122 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 FAM24AA6NFZ4 105 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 INE1O15225 51 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 BCE1O60756 84 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 TIMM17BO60830 172 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 BCL2P10415 239 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 ZNF25P17030 456 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 RRAS2P62070 204 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 RPS29P62273 56 aaKnown RBP0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 SSBP1Q04837 148 aaKnown RBP0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 IZUMO2Q6UXV1 221 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 SNX29P2Q8IUI4 249 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 HYLS1Q96M11 299 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 MRPL35Q9NZE8 188 aaKnown RBP0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 SCP2D1Q9UJQ7 156 aa0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 LSM2Q9Y333 95 aaKnown RBP0.88□□□□□ -2.27
HMGB1P27-201ENST00000431429 TRBV20-1A0A075B6N2 111 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 NDUFA1O15239 70 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 PFDN1O60925 122 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 CD3DP04234 171 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 ARMS2P0C7Q2 107 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 S100A11P31949 105 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 SDC2P34741 201 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 MRPS10P82664 201 aaKnown RBP0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 ZNF56Q15929 161 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 TMEM128Q5BJH2 165 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 TMEM229BQ8NBD8 167 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 OR13C6PQ8NH95 151 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 PYDC1Q8WXC3 89 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 PLEKHB2Q96CS7 222 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 OTORQ9NRC9 128 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 ARL2-SNX15V9GYD0 113 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 NEBP20929 6669 aa0.87□□□□□ -2.27
HMGB1P27-201ENST00000431429 A0A087WSZ3 146 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 TRBV30A0A0K0K1B3 111 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 LINC00959A0A1B0GUT2 108 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 C17orf112F2Z3M2 114 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 NCR2O95944 276 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 TCRAP04437 139 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 AKAIN1P0CW23 69 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 PYYP10082 97 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 G0S2P27469 103 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 TMBIM6P55061 237 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 VBP1P61758 197 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 NCS1P62166 190 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 SPANXN1Q5VSR9 72 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 MIC13Q5XKP0 118 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 TRIQKQ629K1 86 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 TEX261Q6UWH6 196 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 TMEM14EPQ6UXP3 125 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 SSBP3-AS1Q7Z2R9 100 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 OR5H6Q8NGV6 325 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 MGST2Q99735 147 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 CCDC32Q9BV29 185 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 NIT2Q9NQR4 276 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 GSKIPQ9P0R6 139 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 ZFP30Q9Y2G7 519 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 C22orf24Q9Y442 160 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 SNURFQ9Y675 71 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 MUC17Q685J3 4493 aa0.86□□□□□ -2.27
HMGB1P27-201ENST00000431429 KMT2DO14686 5537 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 FAM25AB3EWG3 89 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 FAM25CB3EWG5 89 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 FAM25GB3EWG6 89 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 F6UZH7 168 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 H3BVH4 76 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 M0QY20 66 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 SSSCA1O60232 199 aa0.85□□□□□ -2.27
HMGB1P27-201ENST00000431429 TRGC2P03986 189 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms