RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 FAM30AQ9NZY2 134 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 PLA2G2DQ9UNK4 145 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 ATMQ13315 3056 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 Q6ZQT0 140 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 ZNF575Q86XF7 245 aa7.76□□□□□ -1.17
PTCH1-208ENST00000430669 SETXQ7Z333 2677 aaKnown RBP7.76□□□□□ -1.17
PTCH1-208ENST00000430669 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
PTCH1-208ENST00000430669 SPATA3Q8NHX4 192 aa7.75□□□□□ -1.17
PTCH1-208ENST00000430669 K7EIL1 84 aa7.74□□□□□ -1.17
PTCH1-208ENST00000430669 TLX1NBP0CAT3 122 aa7.74□□□□□ -1.17
PTCH1-208ENST00000430669 Q6ZRP5 223 aa7.74□□□□□ -1.17
PTCH1-208ENST00000430669 DMDP11532 3685 aa7.74□□□□□ -1.17
PTCH1-208ENST00000430669 VPREB1P12018 145 aa7.73□□□□□ -1.17
PTCH1-208ENST00000430669 KCNQ1DNQ9H478 68 aa7.73□□□□□ -1.17
PTCH1-208ENST00000430669 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
PTCH1-208ENST00000430669 A0A087WSZ3 146 aa7.72□□□□□ -1.17
PTCH1-208ENST00000430669 LOC400499M0QZD8 3231 aa7.72□□□□□ -1.17
PTCH1-208ENST00000430669 RTL8CO15255 209 aa7.71□□□□□ -1.18
PTCH1-208ENST00000430669 C15orf56Q8N910 161 aa7.7□□□□□ -1.18
PTCH1-208ENST00000430669 Q8NBF4 154 aa7.7□□□□□ -1.18
PTCH1-208ENST00000430669 Q8N9L7 120 aa7.7□□□□□ -1.18
PTCH1-208ENST00000430669 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
PTCH1-208ENST00000430669 WWC2-AS2Q96NR7 200 aa7.69□□□□□ -1.18
PTCH1-208ENST00000430669 hDV103S1A0JD37 113 aa7.68□□□□□ -1.18
PTCH1-208ENST00000430669 A0A0U1RQV1 116 aa7.68□□□□□ -1.18
PTCH1-208ENST00000430669 IGHV6-1A0A0B4J1U7 121 aa7.68□□□□□ -1.18
PTCH1-208ENST00000430669 A0A087WVE0 104 aa7.67□□□□□ -1.18
PTCH1-208ENST00000430669 EPM2AB3EWF7 344 aa7.67□□□□□ -1.18
PTCH1-208ENST00000430669 H0Y9P7 68 aa7.66□□□□□ -1.18
PTCH1-208ENST00000430669 LINC00476Q8WZB0 136 aa7.66□□□□□ -1.18
PTCH1-208ENST00000430669 IGLV1-50A0A075B6I6 118 aa7.66□□□□□ -1.18
PTCH1-208ENST00000430669 SMIM26A0A096LP01 95 aa7.66□□□□□ -1.18
PTCH1-208ENST00000430669 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.19
PTCH1-208ENST00000430669 MGAM2Q2M2H8 2515 aa7.65□□□□□ -1.19
PTCH1-208ENST00000430669 CRYGAP11844 174 aa7.65□□□□□ -1.19
PTCH1-208ENST00000430669 HRNRQ86YZ3 2850 aaPredicted RBP7.64□□□□□ -1.19
PTCH1-208ENST00000430669 H3BPC8 53 aa7.64□□□□□ -1.19
PTCH1-208ENST00000430669 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
PTCH1-208ENST00000430669 LINC00528Q8N1L1 170 aa7.64□□□□□ -1.19
PTCH1-208ENST00000430669 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
PTCH1-208ENST00000430669 CNBPP62633 177 aaKnown RBP7.63□□□□□ -1.19
PTCH1-208ENST00000430669 LINC00208Q96KT6 92 aa7.63□□□□□ -1.19
PTCH1-208ENST00000430669 MOBPQ13875 183 aa7.63□□□□□ -1.19
PTCH1-208ENST00000430669 A6NED7 52 aa7.63□□□□□ -1.19
PTCH1-208ENST00000430669 ZZEF1O43149 2961 aa7.63□□□□□ -1.19
PTCH1-208ENST00000430669 UNC79Q9P2D8 2635 aa7.63□□□□□ -1.19
PTCH1-208ENST00000430669 PLA2G1BP04054 148 aaKnown RBP7.63□□□□□ -1.19
PTCH1-208ENST00000430669 RPL37AP61513 92 aaKnown RBP7.62□□□□□ -1.19
PTCH1-208ENST00000430669 SERTAD4-AS1Q5TG53 156 aa7.61□□□□□ -1.19
PTCH1-208ENST00000430669 J3QL48 77 aa7.61□□□□□ -1.19
PTCH1-208ENST00000430669 PRR4Q16378 134 aa7.61□□□□□ -1.19
PTCH1-208ENST00000430669 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
PTCH1-208ENST00000430669 COL12A1Q99715 3063 aa7.59□□□□□ -1.19
PTCH1-208ENST00000430669 IGLV5-37A0A075B6J1 123 aa7.59□□□□□ -1.19
PTCH1-208ENST00000430669 ERC2-IT1O76042 136 aa7.59□□□□□ -1.19
PTCH1-208ENST00000430669 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
PTCH1-208ENST00000430669 ITPR1Q14643 2758 aa7.59□□□□□ -1.19
PTCH1-208ENST00000430669 LINC01600Q96MT4 127 aa7.58□□□□□ -1.2
PTCH1-208ENST00000430669 BAHCC1Q9P281 2608 aa7.58□□□□□ -1.2
PTCH1-208ENST00000430669 SMIM29Q86T20 159 aa7.57□□□□□ -1.2
PTCH1-208ENST00000430669 LAMA5O15230 3695 aa7.56□□□□□ -1.2
PTCH1-208ENST00000430669 ASPMQ8IZT6 3477 aa7.56□□□□□ -1.2
PTCH1-208ENST00000430669 APCP25054 2843 aa7.56□□□□□ -1.2
PTCH1-208ENST00000430669 DEFB116Q30KQ4 102 aa7.56□□□□□ -1.2
PTCH1-208ENST00000430669 APLNQ9ULZ1 77 aa7.56□□□□□ -1.2
PTCH1-208ENST00000430669 CRYBG3Q68DQ2 2970 aa7.56□□□□□ -1.2
PTCH1-208ENST00000430669 C9orf163Q8N9P6 203 aa7.56□□□□□ -1.2
PTCH1-208ENST00000430669 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
PTCH1-208ENST00000430669 A8MWP4 228 aa7.55□□□□□ -1.2
PTCH1-208ENST00000430669 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
PTCH1-208ENST00000430669 C1orf64Q8NEQ6 169 aa7.55□□□□□ -1.2
PTCH1-208ENST00000430669 CHTF8P0CG12 524 aa7.55□□□□□ -1.2
PTCH1-208ENST00000430669 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
PTCH1-208ENST00000430669 ST20-AS1Q8NBB2 130 aa7.54□□□□□ -1.2
PTCH1-208ENST00000430669 A0A087WTM6 91 aa7.53□□□□□ -1.2
PTCH1-208ENST00000430669 LINC00313P59037 77 aa7.52□□□□□ -1.21
PTCH1-208ENST00000430669 C8orf87E5RJ46 101 aa7.52□□□□□ -1.21
PTCH1-208ENST00000430669 ZNF861PO60384 105 aa7.52□□□□□ -1.21
PTCH1-208ENST00000430669 TYMSOSQ8TAI1 123 aa7.52□□□□□ -1.21
PTCH1-208ENST00000430669 FAM104AQ969W3 186 aa7.51□□□□□ -1.21
PTCH1-208ENST00000430669 COL6A5A8TX70 2615 aa7.51□□□□□ -1.21
PTCH1-208ENST00000430669 SPINK1P00995 79 aa7.51□□□□□ -1.21
PTCH1-208ENST00000430669 OBSCN-AS1Q96MR7 158 aa7.51□□□□□ -1.21
PTCH1-208ENST00000430669 TRAV22A0A0B4J277 110 aa7.51□□□□□ -1.21
PTCH1-208ENST00000430669 Q8N377 158 aa7.51□□□□□ -1.21
PTCH1-208ENST00000430669 ZFHX4Q86UP3 3567 aa7.49□□□□□ -1.21
PTCH1-208ENST00000430669 LINC00336Q6ZUF6 198 aa7.48□□□□□ -1.21
PTCH1-208ENST00000430669 SPENQ96T58 3664 aaKnown RBP7.48□□□□□ -1.21
PTCH1-208ENST00000430669 NBEAL2Q6ZNJ1 2754 aa7.47□□□□□ -1.21
PTCH1-208ENST00000430669 STAB1Q9NY15 2570 aa7.47□□□□□ -1.21
PTCH1-208ENST00000430669 IGFL1Q6UW32 110 aa7.47□□□□□ -1.21
PTCH1-208ENST00000430669 BSNQ9UPA5 3926 aa7.47□□□□□ -1.21
PTCH1-208ENST00000430669 SSBP3-AS1Q7Z2R9 100 aa7.47□□□□□ -1.21
PTCH1-208ENST00000430669 ACYP2P14621 99 aa7.47□□□□□ -1.21
PTCH1-208ENST00000430669 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.21
PTCH1-208ENST00000430669 COX6B2Q6YFQ2 88 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms