RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 KCNQ1DNQ9H478 68 aa10.17□□□□□ -0.78
UBE3D-204ENST00000430071 PRYO14603 147 aa10.16□□□□□ -0.78
UBE3D-204ENST00000430071 LINC00337Q8N6G1 96 aa10.16□□□□□ -0.78
UBE3D-204ENST00000430071 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
UBE3D-204ENST00000430071 S100A12P80511 92 aa10.15□□□□□ -0.78
UBE3D-204ENST00000430071 S100A7L2Q5SY68 101 aa10.15□□□□□ -0.78
UBE3D-204ENST00000430071 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
UBE3D-204ENST00000430071 HIST1H4GQ99525 98 aa10.15□□□□□ -0.78
UBE3D-204ENST00000430071 ZNF861PO60384 105 aa10.14□□□□□ -0.79
UBE3D-204ENST00000430071 SMIM6P0DI80 62 aa10.14□□□□□ -0.79
UBE3D-204ENST00000430071 SPRR1AP35321 89 aa10.14□□□□□ -0.79
UBE3D-204ENST00000430071 LINC00518Q8N0U6 118 aa10.14□□□□□ -0.79
UBE3D-204ENST00000430071 OR13C6PQ8NH95 151 aa10.14□□□□□ -0.79
UBE3D-204ENST00000430071 KRTAP4-16G5E9R7 235 aaPredicted RBP10.13□□□□□ -0.79
UBE3D-204ENST00000430071 PRLHP81277 87 aa10.13□□□□□ -0.79
UBE3D-204ENST00000430071 FAM19A1Q7Z5A9 133 aa10.13□□□□□ -0.79
UBE3D-204ENST00000430071 A4D1N5 150 aa10.12□□□□□ -0.79
UBE3D-204ENST00000430071 RPL28P46779 137 aaKnown RBP10.12□□□□□ -0.79
UBE3D-204ENST00000430071 UBE2AP49459 152 aa10.12□□□□□ -0.79
UBE3D-204ENST00000430071 LPAP08519 4548 aa10.11□□□□□ -0.79
UBE3D-204ENST00000430071 TRAV23DV6A0A075B6W5 121 aa10.11□□□□□ -0.79
UBE3D-204ENST00000430071 RNF213Q63HN8 5207 aa10.11□□□□□ -0.79
UBE3D-204ENST00000430071 UQCR10Q9UDW1 63 aa10.09□□□□□ -0.79
UBE3D-204ENST00000430071 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
UBE3D-204ENST00000430071 A6NDN8 102 aa10.08□□□□□ -0.8
UBE3D-204ENST00000430071 ZNF73O43830 326 aaPredicted RBP10.07□□□□□ -0.8
UBE3D-204ENST00000430071 PRO1933Q9H354 126 aa10.07□□□□□ -0.8
UBE3D-204ENST00000430071 B5MCH6 92 aa10.06□□□□□ -0.8
UBE3D-204ENST00000430071 TAL2Q16559 108 aa10.06□□□□□ -0.8
UBE3D-204ENST00000430071 C12orf57Q99622 126 aa10.06□□□□□ -0.8
UBE3D-204ENST00000430071 TRAV13-2A0A0B4J235 113 aa10.05□□□□□ -0.8
UBE3D-204ENST00000430071 CEND1Q8N111 149 aa10.05□□□□□ -0.8
UBE3D-204ENST00000430071 HIGD2AQ9BW72 106 aa10.04□□□□□ -0.8
UBE3D-204ENST00000430071 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
UBE3D-204ENST00000430071 Q6ZRX8 168 aa10.02□□□□□ -0.8
UBE3D-204ENST00000430071 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.8
UBE3D-204ENST00000430071 A0A087X002 238 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 CFC1BP0CG36 223 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 CFC1P0CG37 223 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 FXYD2P54710 66 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 HSD52Q0P140 79 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 C6orf99Q4VX62 202 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 SMCR5Q8TEV8 140 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 Q9BRP9 147 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
UBE3D-204ENST00000430071 RPL13AP40429 203 aaKnown RBP10□□□□□ -0.81
UBE3D-204ENST00000430071 ERC2-IT1O76042 136 aa9.99□□□□□ -0.81
UBE3D-204ENST00000430071 HINT1P49773 126 aaPredicted RBP9.98□□□□□ -0.81
UBE3D-204ENST00000430071 A0A0B4J2C4 111 aa9.97□□□□□ -0.81
UBE3D-204ENST00000430071 COX7BP24311 80 aa9.97□□□□□ -0.81
UBE3D-204ENST00000430071 ELOF1P60002 83 aaKnown RBP9.97□□□□□ -0.81
UBE3D-204ENST00000430071 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.82
UBE3D-204ENST00000430071 A6NJY4 79 aa9.96□□□□□ -0.82
UBE3D-204ENST00000430071 RAB37Q96AX2 223 aa9.96□□□□□ -0.82
UBE3D-204ENST00000430071 TRBV7-6A0A0J9YX20 115 aa9.95□□□□□ -0.82
UBE3D-204ENST00000430071 KRTAP13-2Q52LG2 175 aa9.95□□□□□ -0.82
UBE3D-204ENST00000430071 TSPAN13O95857 204 aa9.94□□□□□ -0.82
UBE3D-204ENST00000430071 SPRR4Q96PI1 79 aa9.94□□□□□ -0.82
UBE3D-204ENST00000430071 A0A1B0GWB2 263 aa9.93□□□□□ -0.82
UBE3D-204ENST00000430071 H7C2G1 150 aa9.93□□□□□ -0.82
UBE3D-204ENST00000430071 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
UBE3D-204ENST00000430071 TSTD3H0UI37 97 aa9.92□□□□□ -0.82
UBE3D-204ENST00000430071 CTAG1AP78358 180 aa9.92□□□□□ -0.82
UBE3D-204ENST00000430071 BVES-AS1Q5T3Y7 98 aa9.92□□□□□ -0.82
UBE3D-204ENST00000430071 K7ERJ3 54 aa9.91□□□□□ -0.82
UBE3D-204ENST00000430071 DHRS4-AS1Q9P1J3 65 aa9.91□□□□□ -0.82
UBE3D-204ENST00000430071 PRO1854Q9UHT4 67 aa9.91□□□□□ -0.82
UBE3D-204ENST00000430071 PRR4Q16378 134 aa9.9□□□□□ -0.82
UBE3D-204ENST00000430071 ZNF706Q9Y5V0 76 aaPredicted RBP9.9□□□□□ -0.82
UBE3D-204ENST00000430071 CRYGAP11844 174 aa9.89□□□□□ -0.83
UBE3D-204ENST00000430071 ST20-AS1Q8NBB2 130 aa9.89□□□□□ -0.83
UBE3D-204ENST00000430071 TYMSOSQ8TAI1 123 aa9.89□□□□□ -0.83
UBE3D-204ENST00000430071 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
UBE3D-204ENST00000430071 VAMP3Q15836 100 aa9.88□□□□□ -0.83
UBE3D-204ENST00000430071 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
UBE3D-204ENST00000430071 GAGE2AQ6NT46 116 aa9.87□□□□□ -0.83
UBE3D-204ENST00000430071 Q1RN00 199 aa9.86□□□□□ -0.83
UBE3D-204ENST00000430071 LINC00575Q6W349 94 aa9.85□□□□□ -0.83
UBE3D-204ENST00000430071 M0R143 59 aa9.84□□□□□ -0.83
UBE3D-204ENST00000430071 C3orf22Q8N5N4 141 aa9.83□□□□□ -0.84
UBE3D-204ENST00000430071 TRIAP1O43715 76 aa9.81□□□□□ -0.84
UBE3D-204ENST00000430071 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
UBE3D-204ENST00000430071 SLC25A20O43772 301 aa9.8□□□□□ -0.84
UBE3D-204ENST00000430071 SPRR1BP22528 89 aa9.8□□□□□ -0.84
UBE3D-204ENST00000430071 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
UBE3D-204ENST00000430071 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
UBE3D-204ENST00000430071 DEFB105AQ8NG35 78 aa9.79□□□□□ -0.84
UBE3D-204ENST00000430071 H0YGX0 51 aa9.78□□□□□ -0.84
UBE3D-204ENST00000430071 LINC00304Q8N9R0 145 aa9.78□□□□□ -0.84
UBE3D-204ENST00000430071 FAM218AQ96MZ4 157 aa9.78□□□□□ -0.84
UBE3D-204ENST00000430071 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.84
UBE3D-204ENST00000430071 Q6ZQY7 126 aa9.76□□□□□ -0.85
UBE3D-204ENST00000430071 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
UBE3D-204ENST00000430071 TEX49A0A1B0GTD5 131 aa9.75□□□□□ -0.85
UBE3D-204ENST00000430071 PSMB2P49721 201 aa9.75□□□□□ -0.85
UBE3D-204ENST00000430071 BATFQ16520 125 aa9.75□□□□□ -0.85
UBE3D-204ENST00000430071 Q8N377 158 aa9.75□□□□□ -0.85
UBE3D-204ENST00000430071 MOBPQ13875 183 aa9.74□□□□□ -0.85
UBE3D-204ENST00000430071 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
UBE3D-204ENST00000430071 CLEC2BQ92478 149 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms