RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 EPM2AB3EWF7 344 aa4.96□□□□□ -1.62
HMGA1P4-201ENST00000428643 CFC1BP0CG36 223 aa4.96□□□□□ -1.62
HMGA1P4-201ENST00000428643 CFC1P0CG37 223 aa4.96□□□□□ -1.62
HMGA1P4-201ENST00000428643 TRAV23DV6A0A075B6W5 121 aa4.95□□□□□ -1.62
HMGA1P4-201ENST00000428643 IGLV6-57P01721 117 aa4.95□□□□□ -1.62
HMGA1P4-201ENST00000428643 LORP23490 312 aaPredicted RBP4.95□□□□□ -1.62
HMGA1P4-201ENST00000428643 XGP55808 180 aa4.95□□□□□ -1.62
HMGA1P4-201ENST00000428643 Q1RN00 199 aa4.95□□□□□ -1.62
HMGA1P4-201ENST00000428643 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
HMGA1P4-201ENST00000428643 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
HMGA1P4-201ENST00000428643 PRYO14603 147 aa4.94□□□□□ -1.62
HMGA1P4-201ENST00000428643 CDK2AP2O75956 126 aa4.94□□□□□ -1.62
HMGA1P4-201ENST00000428643 PRO1854Q9UHT4 67 aa4.94□□□□□ -1.62
HMGA1P4-201ENST00000428643 CBY1Q9Y3M2 126 aa4.94□□□□□ -1.62
HMGA1P4-201ENST00000428643 A0A1B0GWB2 263 aa4.93□□□□□ -1.62
HMGA1P4-201ENST00000428643 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
HMGA1P4-201ENST00000428643 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
HMGA1P4-201ENST00000428643 LINC00528Q8N1L1 170 aa4.93□□□□□ -1.62
HMGA1P4-201ENST00000428643 ZNF73O43830 326 aaPredicted RBP4.92□□□□□ -1.62
HMGA1P4-201ENST00000428643 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
HMGA1P4-201ENST00000428643 REG3GQ6UW15 175 aa4.92□□□□□ -1.62
HMGA1P4-201ENST00000428643 DIRC1Q969H9 104 aa4.92□□□□□ -1.62
HMGA1P4-201ENST00000428643 SNHG12Q9BXW3 62 aa4.92□□□□□ -1.62
HMGA1P4-201ENST00000428643 KCNQ1DNQ9H478 68 aa4.92□□□□□ -1.62
HMGA1P4-201ENST00000428643 PSORS1C2Q9UIG4 136 aa4.92□□□□□ -1.62
HMGA1P4-201ENST00000428643 ETDCA0A1B0GVM5 59 aa4.91□□□□□ -1.62
HMGA1P4-201ENST00000428643 PSMB2P49721 201 aa4.91□□□□□ -1.62
HMGA1P4-201ENST00000428643 RPL37AP61513 92 aaKnown RBP4.91□□□□□ -1.62
HMGA1P4-201ENST00000428643 C6orf99Q4VX62 202 aa4.91□□□□□ -1.62
HMGA1P4-201ENST00000428643 C1orf137Q5JT78 98 aa4.91□□□□□ -1.62
HMGA1P4-201ENST00000428643 SMIM11BQ8TCY0 68 aa4.91□□□□□ -1.62
HMGA1P4-201ENST00000428643 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
HMGA1P4-201ENST00000428643 BCE1O60756 84 aa4.9□□□□□ -1.63
HMGA1P4-201ENST00000428643 TSPAN13O95857 204 aa4.9□□□□□ -1.63
HMGA1P4-201ENST00000428643 UBE2AP49459 152 aa4.9□□□□□ -1.63
HMGA1P4-201ENST00000428643 LCE2CQ5TA81 110 aa4.9□□□□□ -1.63
HMGA1P4-201ENST00000428643 FAM19A1Q7Z5A9 133 aa4.9□□□□□ -1.63
HMGA1P4-201ENST00000428643 ABCA13Q86UQ4 5058 aa4.9□□□□□ -1.63
HMGA1P4-201ENST00000428643 RPL28P46779 137 aaKnown RBP4.89□□□□□ -1.63
HMGA1P4-201ENST00000428643 PRLHP81277 87 aa4.89□□□□□ -1.63
HMGA1P4-201ENST00000428643 COL5A1-AS1Q5SY13 56 aa4.89□□□□□ -1.63
HMGA1P4-201ENST00000428643 NAA38Q9BRA0 125 aaKnown RBP4.89□□□□□ -1.63
HMGA1P4-201ENST00000428643 HSPG2P98160 4391 aa4.88□□□□□ -1.63
HMGA1P4-201ENST00000428643 TRIAP1O43715 76 aa4.88□□□□□ -1.63
HMGA1P4-201ENST00000428643 COX7BP24311 80 aa4.88□□□□□ -1.63
HMGA1P4-201ENST00000428643 SPRR1AP35321 89 aa4.88□□□□□ -1.63
HMGA1P4-201ENST00000428643 VAMP3Q15836 100 aa4.88□□□□□ -1.63
HMGA1P4-201ENST00000428643 B5MCH6 92 aa4.87□□□□□ -1.63
HMGA1P4-201ENST00000428643 KRTAP4-16G5E9R7 235 aaPredicted RBP4.87□□□□□ -1.63
HMGA1P4-201ENST00000428643 FAM229AH3BQW9 127 aa4.87□□□□□ -1.63
HMGA1P4-201ENST00000428643 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
HMGA1P4-201ENST00000428643 Q6ZRX8 168 aa4.87□□□□□ -1.63
HMGA1P4-201ENST00000428643 HIGD2AQ9BW72 106 aa4.87□□□□□ -1.63
HMGA1P4-201ENST00000428643 TRBV7-6A0A0J9YX20 115 aa4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 H3BUT2 72 aa4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 TAX1BP3O14907 124 aa4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 PLA2G1BP04054 148 aaKnown RBP4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 IGLV7-43P04211 117 aa4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 COX6CP09669 75 aa4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 Q5VSD8 79 aa4.86□□□□□ -1.63
HMGA1P4-201ENST00000428643 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
HMGA1P4-201ENST00000428643 C9orf118A6NHY6 69 aa4.85□□□□□ -1.63
HMGA1P4-201ENST00000428643 SLC25A20O43772 301 aa4.85□□□□□ -1.63
HMGA1P4-201ENST00000428643 LYRM7Q5U5X0 104 aa4.85□□□□□ -1.63
HMGA1P4-201ENST00000428643 DNAH5Q8TE73 4624 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 H0Y9J4 135 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 H0YGX0 51 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 ZNF861PO60384 105 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 KRTAP13-1Q8IUC0 172 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 CLEC2BQ92478 149 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 Q9BRP9 147 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 DHRS4-AS1Q9P1J3 65 aa4.84□□□□□ -1.63
HMGA1P4-201ENST00000428643 FABP2P12104 132 aa4.83□□□□□ -1.64
HMGA1P4-201ENST00000428643 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
HMGA1P4-201ENST00000428643 Q8N1X5 172 aa4.83□□□□□ -1.64
HMGA1P4-201ENST00000428643 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
HMGA1P4-201ENST00000428643 A0A1W2PPM0 123 aa4.82□□□□□ -1.64
HMGA1P4-201ENST00000428643 SNCGO76070 127 aa4.82□□□□□ -1.64
HMGA1P4-201ENST00000428643 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
HMGA1P4-201ENST00000428643 SMCR5Q8TEV8 140 aa4.82□□□□□ -1.64
HMGA1P4-201ENST00000428643 FAM218AQ96MZ4 157 aa4.82□□□□□ -1.64
HMGA1P4-201ENST00000428643 hADV29S1A0JD25 119 aa4.81□□□□□ -1.64
HMGA1P4-201ENST00000428643 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
HMGA1P4-201ENST00000428643 DNAL4O96015 105 aa4.81□□□□□ -1.64
HMGA1P4-201ENST00000428643 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
HMGA1P4-201ENST00000428643 ATXN8Q156A1 80 aa4.8□□□□□ -1.64
HMGA1P4-201ENST00000428643 SPINK6Q6UWN8 80 aa4.8□□□□□ -1.64
HMGA1P4-201ENST00000428643 ZNF706Q9Y5V0 76 aaPredicted RBP4.8□□□□□ -1.64
HMGA1P4-201ENST00000428643 SPCS1Q9Y6A9 102 aa4.8□□□□□ -1.64
HMGA1P4-201ENST00000428643 LST1O00453 97 aa4.79□□□□□ -1.64
HMGA1P4-201ENST00000428643 TCL1BO95988 128 aa4.79□□□□□ -1.64
HMGA1P4-201ENST00000428643 Q6ZQY7 126 aa4.79□□□□□ -1.64
HMGA1P4-201ENST00000428643 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
HMGA1P4-201ENST00000428643 DEFB105AQ8NG35 78 aa4.79□□□□□ -1.64
HMGA1P4-201ENST00000428643 HERC1Q15751 4861 aa4.79□□□□□ -1.64
HMGA1P4-201ENST00000428643 TRBV20-1A0A075B6N2 111 aa4.78□□□□□ -1.64
HMGA1P4-201ENST00000428643 A0A1B0GX51 115 aa4.78□□□□□ -1.64
HMGA1P4-201ENST00000428643 TRACP01848 142 aa4.78□□□□□ -1.64
HMGA1P4-201ENST00000428643 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms