RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 TLX1NBP0CAT3 122 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 COX8AP10176 69 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 RPL13AP40429 203 aaKnown RBP3.42□□□□□ -1.86
C9orf3-205ENST00000427193 CXCL5P42830 114 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 SPAG11BQ08648 103 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 C2orf82Q6UX34 121 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 ARL17AQ8IVW1 177 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 Q8N814 137 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 ORAOV1Q8WV07 137 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 TTTY13Q9BZ97 58 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 OCR1Q9BZK8 76 aa3.42□□□□□ -1.86
C9orf3-205ENST00000427193 MUC2Q02817 5179 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 A0A0J9YXY3 114 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 TRBV30A0A0K0K1B3 111 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 HERVK_113P61574 105 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 SFTA2Q6UW10 78 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 UNQ6190/PRO20217Q6UXQ8 127 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 Q6ZRU5 148 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 C2orf91Q6ZV80 131 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 C9orf163Q8N9P6 203 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 LINC00526Q96FQ7 95 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 VAMP8Q9BV40 100 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 TP73-AS1Q9UF72 201 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 NDUFA12Q9UI09 145 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
C9orf3-205ENST00000427193 MYMXA0A1B0GTQ4 84 aa3.4□□□□□ -1.87
C9orf3-205ENST00000427193 LECT2O14960 151 aa3.4□□□□□ -1.87
C9orf3-205ENST00000427193 TIMM17BO60830 172 aa3.4□□□□□ -1.87
C9orf3-205ENST00000427193 NDUFV3P56181 108 aaKnown RBP3.4□□□□□ -1.87
C9orf3-205ENST00000427193 SYCNQ0VAF6 134 aa3.4□□□□□ -1.87
C9orf3-205ENST00000427193 CIRBPQ14011 172 aaKnown RBP3.4□□□□□ -1.87
C9orf3-205ENST00000427193 COX17Q14061 63 aa3.4□□□□□ -1.87
C9orf3-205ENST00000427193 SDIM1Q6ZPB5 146 aa3.4□□□□□ -1.87
C9orf3-205ENST00000427193 HIGD1BQ9P298 99 aa3.4□□□□□ -1.87
C9orf3-205ENST00000427193 PSCAO43653 123 aa3.39□□□□□ -1.87
C9orf3-205ENST00000427193 LGALS3P17931 250 aaKnown RBP3.39□□□□□ -1.87
C9orf3-205ENST00000427193 Q6ZSA8 131 aa3.39□□□□□ -1.87
C9orf3-205ENST00000427193 C14orf144Q96I85 54 aa3.39□□□□□ -1.87
C9orf3-205ENST00000427193 ZNF815PA8K554 130 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 NDUFC2-KCTD14E9PQ53 114 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 Q1RN00 199 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 C9orf116Q5BN46 136 aaPredicted RBP3.38□□□□□ -1.87
C9orf3-205ENST00000427193 SLC25A34Q6PIV7 304 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 SOSTDC1Q6X4U4 206 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 MTURNQ8N3F0 131 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 Q8NDZ9 215 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 CARD19Q96LW7 228 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 CAMK2N2Q96S95 79 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 MIEN1Q9BRT3 115 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 SPANXB1Q9NS25 103 aaPredicted RBP3.38□□□□□ -1.87
C9orf3-205ENST00000427193 TOMM7Q9P0U1 55 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 ERG28Q9UKR5 140 aa3.38□□□□□ -1.87
C9orf3-205ENST00000427193 TNXBP22105 4242 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 A0A1B0GV90 55 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 TSTD3H0UI37 97 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 PANO1I0J062 215 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 OXTP01178 125 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 SMR3BP02814 79 aaPredicted RBP3.37□□□□□ -1.87
C9orf3-205ENST00000427193 CKS1BP61024 79 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 C9orf129Q5T035 196 aaKnown RBP3.37□□□□□ -1.87
C9orf3-205ENST00000427193 SPANXDQ9BXN6 97 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 UQCR10Q9UDW1 63 aa3.37□□□□□ -1.87
C9orf3-205ENST00000427193 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.36□□□□□ -1.87
C9orf3-205ENST00000427193 FAM168BA1KXE4 195 aa3.36□□□□□ -1.87
C9orf3-205ENST00000427193 SMIM13P0DJ93 91 aa3.36□□□□□ -1.87
C9orf3-205ENST00000427193 TAL2Q16559 108 aa3.36□□□□□ -1.87
C9orf3-205ENST00000427193 MIR7-3HGQ8N6C7 128 aa3.36□□□□□ -1.87
C9orf3-205ENST00000427193 SND1-IT1Q9HBX3 110 aa3.36□□□□□ -1.87
C9orf3-205ENST00000427193 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.35□□□□□ -1.87
C9orf3-205ENST00000427193 A0A096LNI7 61 aa3.35□□□□□ -1.87
C9orf3-205ENST00000427193 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
C9orf3-205ENST00000427193 H0Y9J4 135 aa3.35□□□□□ -1.87
C9orf3-205ENST00000427193 IFITM1P13164 125 aa3.35□□□□□ -1.87
C9orf3-205ENST00000427193 LINC00308Q8TCZ7 52 aa3.35□□□□□ -1.87
C9orf3-205ENST00000427193 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
C9orf3-205ENST00000427193 PRO1933Q9H354 126 aa3.35□□□□□ -1.87
C9orf3-205ENST00000427193 IGKV2-28A0A075B6P5 120 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 A0A1W2PNN7 141 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 NDUFC2O95298 119 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 IGKV2D-28P01615 120 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 DDTP30046 118 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 FUSP35637 526 aaKnown RBP eCLIP3.34□□□□□ -1.87
C9orf3-205ENST00000427193 MEIG1Q5JSS6 88 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 DAND5Q8N907 189 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 PLAC8Q9NZF1 115 aa3.34□□□□□ -1.87
C9orf3-205ENST00000427193 PFN2P35080 140 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 LINC00158P58513 81 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 HSD52Q0P140 79 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 MUSTN1Q8IVN3 82 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 XAGE1AQ9HD64 81 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 LINC00474Q9P2X8 69 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 PKIGQ9Y2B9 76 aa3.33□□□□□ -1.88
C9orf3-205ENST00000427193 TRBV10-2A0A0K0K1G8 114 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms