RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 BRK1Q8WUW1 75 aa9.09□□□□□ -0.95
RPL28-202ENST00000426763 TP53AIP1Q9HCN2 124 aa9.08□□□□□ -0.96
RPL28-202ENST00000426763 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
RPL28-202ENST00000426763 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
RPL28-202ENST00000426763 CNBPP62633 177 aaKnown RBP9.08□□□□□ -0.96
RPL28-202ENST00000426763 SMIM29Q86T20 159 aa9.08□□□□□ -0.96
RPL28-202ENST00000426763 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
RPL28-202ENST00000426763 J3QL48 77 aa9.07□□□□□ -0.96
RPL28-202ENST00000426763 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
RPL28-202ENST00000426763 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
RPL28-202ENST00000426763 ZNF861PO60384 105 aa9.07□□□□□ -0.96
RPL28-202ENST00000426763 CASC10Q5T4H9 136 aa9.07□□□□□ -0.96
RPL28-202ENST00000426763 TRBV7-4A0A0J9YYF1 115 aa9.07□□□□□ -0.96
RPL28-202ENST00000426763 SVIPQ8NHG7 77 aa9.06□□□□□ -0.96
RPL28-202ENST00000426763 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
RPL28-202ENST00000426763 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
RPL28-202ENST00000426763 LINC00313P59037 77 aa9.05□□□□□ -0.96
RPL28-202ENST00000426763 AKAP13Q12802 2813 aa9.05□□□□□ -0.96
RPL28-202ENST00000426763 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
RPL28-202ENST00000426763 PRUNE2Q8WUY3 3088 aa9.04□□□□□ -0.96
RPL28-202ENST00000426763 SPINK1P00995 79 aa9.01□□□□□ -0.97
RPL28-202ENST00000426763 A6NED7 52 aa9.01□□□□□ -0.97
RPL28-202ENST00000426763 SMR3BP02814 79 aaPredicted RBP9.01□□□□□ -0.97
RPL28-202ENST00000426763 SSBP3-AS1Q7Z2R9 100 aa9□□□□□ -0.97
RPL28-202ENST00000426763 A0A1W2PNN7 141 aa9□□□□□ -0.97
RPL28-202ENST00000426763 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
RPL28-202ENST00000426763 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
RPL28-202ENST00000426763 C8orf87E5RJ46 101 aa8.98□□□□□ -0.97
RPL28-202ENST00000426763 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
RPL28-202ENST00000426763 IGSF10Q6WRI0 2623 aa8.98□□□□□ -0.97
RPL28-202ENST00000426763 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
RPL28-202ENST00000426763 PSORS1C2Q9UIG4 136 aa8.97□□□□□ -0.97
RPL28-202ENST00000426763 Q96NJ1 140 aa8.96□□□□□ -0.97
RPL28-202ENST00000426763 IGFL1Q6UW32 110 aa8.96□□□□□ -0.97
RPL28-202ENST00000426763 A8MWP4 228 aa8.95□□□□□ -0.98
RPL28-202ENST00000426763 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
RPL28-202ENST00000426763 TNP2Q05952 138 aa8.95□□□□□ -0.98
RPL28-202ENST00000426763 Q8N377 158 aa8.94□□□□□ -0.98
RPL28-202ENST00000426763 DSPP15924 2871 aaKnown RBP8.94□□□□□ -0.98
RPL28-202ENST00000426763 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
RPL28-202ENST00000426763 WDFY4Q6ZS81 3184 aa8.93□□□□□ -0.98
RPL28-202ENST00000426763 H3BPC8 53 aa8.93□□□□□ -0.98
RPL28-202ENST00000426763 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
RPL28-202ENST00000426763 UNC79Q9P2D8 2635 aa8.92□□□□□ -0.98
RPL28-202ENST00000426763 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
RPL28-202ENST00000426763 TEP1Q99973 2627 aaKnown RBP8.91□□□□□ -0.98
RPL28-202ENST00000426763 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
RPL28-202ENST00000426763 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
RPL28-202ENST00000426763 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
RPL28-202ENST00000426763 K7EQZ3 153 aa8.88□□□□□ -0.99
RPL28-202ENST00000426763 ANAPC11Q9NYG5 84 aa8.87□□□□□ -0.99
RPL28-202ENST00000426763 ACYP2P14621 99 aa8.87□□□□□ -0.99
RPL28-202ENST00000426763 A0A0C4DFX4 3053 aa8.86□□□□□ -0.99
RPL28-202ENST00000426763 ERC2-IT1O76042 136 aa8.86□□□□□ -0.99
RPL28-202ENST00000426763 BAHCC1Q9P281 2608 aa8.85□□□□□ -0.99
RPL28-202ENST00000426763 CDH23Q9H251 3354 aa8.84□□□□□ -0.99
RPL28-202ENST00000426763 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
RPL28-202ENST00000426763 LAMA2P24043 3122 aaKnown RBP8.83□□□□□ -1
RPL28-202ENST00000426763 FAM104AQ969W3 186 aa8.83□□□□□ -1
RPL28-202ENST00000426763 CFAP54Q96N23 3096 aa8.83□□□□□ -1
RPL28-202ENST00000426763 DSCR10P59022 87 aa8.82□□□□□ -1
RPL28-202ENST00000426763 C8orf17Q9NRJ1 99 aa8.82□□□□□ -1
RPL28-202ENST00000426763 PRR15Q8IV56 129 aa8.82□□□□□ -1
RPL28-202ENST00000426763 A0A1B0GVX0 72 aa8.82□□□□□ -1
RPL28-202ENST00000426763 A0A0G2JQZ4 141 aa8.81□□□□□ -1
RPL28-202ENST00000426763 TEX15Q9BXT5 2789 aa8.81□□□□□ -1
RPL28-202ENST00000426763 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
RPL28-202ENST00000426763 TRIOO75962 3097 aa8.8□□□□□ -1
RPL28-202ENST00000426763 A0A0U1RQV1 116 aa8.8□□□□□ -1
RPL28-202ENST00000426763 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
RPL28-202ENST00000426763 COL6A5A8TX70 2615 aa8.79□□□□□ -1
RPL28-202ENST00000426763 C9orf92A6NGG3 77 aa8.77□□□□□ -1.01
RPL28-202ENST00000426763 PSPHP1O15172 72 aa8.77□□□□□ -1.01
RPL28-202ENST00000426763 XIRP2A4UGR9 3374 aa8.77□□□□□ -1.01
RPL28-202ENST00000426763 STAB1Q9NY15 2570 aa8.76□□□□□ -1.01
RPL28-202ENST00000426763 A0A1B0GU69 56 aa8.74□□□□□ -1.01
RPL28-202ENST00000426763 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
RPL28-202ENST00000426763 SETXQ7Z333 2677 aaKnown RBP8.73□□□□□ -1.01
RPL28-202ENST00000426763 PLAC8Q9NZF1 115 aa8.73□□□□□ -1.01
RPL28-202ENST00000426763 IGLV5-48A0A075B6I7 105 aa8.72□□□□□ -1.01
RPL28-202ENST00000426763 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
RPL28-202ENST00000426763 CHD6Q8TD26 2715 aa8.72□□□□□ -1.01
RPL28-202ENST00000426763 SZT2Q5T011 3432 aa8.7□□□□□ -1.02
RPL28-202ENST00000426763 CD164Q04900 197 aa8.69□□□□□ -1.02
RPL28-202ENST00000426763 KRTAP1-5Q9BYS1 174 aa8.68□□□□□ -1.02
RPL28-202ENST00000426763 LCE6AA0A183 80 aa8.68□□□□□ -1.02
RPL28-202ENST00000426763 VPS13AQ96RL7 3174 aa8.67□□□□□ -1.02
RPL28-202ENST00000426763 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
RPL28-202ENST00000426763 TNRC18O15417 2968 aaPredicted RBP8.65□□□□□ -1.02
RPL28-202ENST00000426763 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.03
RPL28-202ENST00000426763 PMAIP1Q13794 54 aa8.61□□□□□ -1.03
RPL28-202ENST00000426763 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
RPL28-202ENST00000426763 SPRR1AP35321 89 aa8.61□□□□□ -1.03
RPL28-202ENST00000426763 GCN1Q92616 2671 aaKnown RBP8.61□□□□□ -1.03
RPL28-202ENST00000426763 NOTCH1P46531 2555 aa8.6□□□□□ -1.03
RPL28-202ENST00000426763 MAP1AP78559 2803 aaPredicted RBP8.58□□□□□ -1.04
RPL28-202ENST00000426763 Q8NDZ9 215 aa8.58□□□□□ -1.04
RPL28-202ENST00000426763 RBM12B-AS1Q9P1G2 102 aa8.58□□□□□ -1.04
RPL28-202ENST00000426763 FLNCQ14315 2725 aa8.57□□□□□ -1.04
RPL28-202ENST00000426763 IGLV7-46A0A075B6I9 117 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms