RNA–Protein interactions for RNA: ENST00000425388.1

LINC00501-201, long intergenic non-protein coding RNA 501, humanhuman

TSL 2 BASIC

Gene LINC00501, Length 2,046 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00501-201ENST00000425388 PLAC8Q9NZF1 115 aa5.36□□□□□ -1.55
LINC00501-201ENST00000425388 SPTAN1Q13813 2472 aaKnown RBP5.36□□□□□ -1.55
LINC00501-201ENST00000425388 DEFB113Q30KQ7 82 aa5.36□□□□□ -1.55
LINC00501-201ENST00000425388 FAM208BQ5VWN6 2430 aa5.36□□□□□ -1.55
LINC00501-201ENST00000425388 AKAP6Q13023 2319 aa5.36□□□□□ -1.55
LINC00501-201ENST00000425388 LRBAP50851 2863 aa5.35□□□□□ -1.55
LINC00501-201ENST00000425388 PRB2P02812 416 aaPredicted RBP5.35□□□□□ -1.55
LINC00501-201ENST00000425388 SPAG11BQ08648 103 aa5.35□□□□□ -1.55
LINC00501-201ENST00000425388 COA5Q86WW8 74 aa5.35□□□□□ -1.55
LINC00501-201ENST00000425388 Q8NBF4 154 aa5.35□□□□□ -1.55
LINC00501-201ENST00000425388 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
LINC00501-201ENST00000425388 K7EQZ3 153 aa5.35□□□□□ -1.55
LINC00501-201ENST00000425388 LRRK2Q5S007 2527 aa5.34□□□□□ -1.55
LINC00501-201ENST00000425388 DNAJC9-AS1A6NH13 148 aa5.34□□□□□ -1.55
LINC00501-201ENST00000425388 WNK1Q9H4A3 2382 aa5.34□□□□□ -1.56
LINC00501-201ENST00000425388 CNBPP62633 177 aaKnown RBP5.33□□□□□ -1.56
LINC00501-201ENST00000425388 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
LINC00501-201ENST00000425388 UNQ6190/PRO20217Q6UXQ8 127 aa5.33□□□□□ -1.56
LINC00501-201ENST00000425388 C9orf163Q8N9P6 203 aa5.33□□□□□ -1.56
LINC00501-201ENST00000425388 DCHS2Q6V1P9 2916 aa5.33□□□□□ -1.56
LINC00501-201ENST00000425388 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
LINC00501-201ENST00000425388 A0A1W2PNM2 257 aa5.32□□□□□ -1.56
LINC00501-201ENST00000425388 H0Y9P7 68 aa5.32□□□□□ -1.56
LINC00501-201ENST00000425388 CSNK1G2-AS1Q8NCQ2 148 aa5.32□□□□□ -1.56
LINC00501-201ENST00000425388 IGKV2D-24A0A075B6R9 120 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 CYSRT1A8MQ03 144 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 FSHBP01225 129 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 CHTF8P0CG12 524 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 CLPSL2Q6UWE3 100 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 LINC00476Q8WZB0 136 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 CMC4P56277 68 aaPredicted RBP5.31□□□□□ -1.56
LINC00501-201ENST00000425388 C1orf137Q5JT78 98 aa5.31□□□□□ -1.56
LINC00501-201ENST00000425388 ABCA2Q9BZC7 2435 aa5.3□□□□□ -1.56
LINC00501-201ENST00000425388 SLURP1P55000 103 aa5.3□□□□□ -1.56
LINC00501-201ENST00000425388 KRTAP10-9P60411 292 aa5.3□□□□□ -1.56
LINC00501-201ENST00000425388 C10orf99Q6UWK7 81 aa5.3□□□□□ -1.56
LINC00501-201ENST00000425388 Q8N377 158 aa5.3□□□□□ -1.56
LINC00501-201ENST00000425388 USP9YO00507 2555 aaPredicted RBP5.3□□□□□ -1.56
LINC00501-201ENST00000425388 SPG11Q96JI7 2443 aa5.3□□□□□ -1.56
LINC00501-201ENST00000425388 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC00501-201ENST00000425388 KRTAP1-3Q8IUG1 177 aa5.29□□□□□ -1.56
LINC00501-201ENST00000425388 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
LINC00501-201ENST00000425388 DHRS4-AS1Q9P1J3 65 aa5.29□□□□□ -1.56
LINC00501-201ENST00000425388 CR1P17927 2039 aa5.28□□□□□ -1.56
LINC00501-201ENST00000425388 GCN1Q92616 2671 aaKnown RBP5.28□□□□□ -1.56
LINC00501-201ENST00000425388 PTPN13Q12923 2485 aa5.28□□□□□ -1.56
LINC00501-201ENST00000425388 C2CD3Q4AC94 2353 aa5.28□□□□□ -1.56
LINC00501-201ENST00000425388 ANGP03950 147 aaKnown RBP5.28□□□□□ -1.56
LINC00501-201ENST00000425388 ANKRD17O75179 2603 aaKnown RBP5.27□□□□□ -1.57
LINC00501-201ENST00000425388 NAV2Q8IVL1 2488 aa5.27□□□□□ -1.57
LINC00501-201ENST00000425388 CREBBPQ92793 2442 aa5.27□□□□□ -1.57
LINC00501-201ENST00000425388 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
LINC00501-201ENST00000425388 XAGE1AQ9HD64 81 aa5.27□□□□□ -1.57
LINC00501-201ENST00000425388 C6orf48Q9UBA6 75 aa5.27□□□□□ -1.57
LINC00501-201ENST00000425388 IGLV10-54A0A075B6I4 117 aa5.26□□□□□ -1.57
LINC00501-201ENST00000425388 SPINK7P58062 85 aa5.26□□□□□ -1.57
LINC00501-201ENST00000425388 EGFEM1PQ0D2K5 195 aa5.26□□□□□ -1.57
LINC00501-201ENST00000425388 Q6YL49 198 aa5.26□□□□□ -1.57
LINC00501-201ENST00000425388 DEFB112Q30KQ8 113 aa5.26□□□□□ -1.57
LINC00501-201ENST00000425388 WFDC13Q8IUB5 93 aa5.26□□□□□ -1.57
LINC00501-201ENST00000425388 C4orf3Q8WVX3 66 aa5.26□□□□□ -1.57
LINC00501-201ENST00000425388 FASNP49327 2511 aaKnown RBP5.26□□□□□ -1.57
LINC00501-201ENST00000425388 SPAG11AQ6PDA7 123 aa5.25□□□□□ -1.57
LINC00501-201ENST00000425388 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
LINC00501-201ENST00000425388 HELZ2Q9BYK8 2649 aaKnown RBP5.25□□□□□ -1.57
LINC00501-201ENST00000425388 FBN2P35556 2912 aa5.25□□□□□ -1.57
LINC00501-201ENST00000425388 RPL37AP8A6NKH3 93 aa5.24□□□□□ -1.57
LINC00501-201ENST00000425388 KRTAP16-1A8MUX0 517 aa5.24□□□□□ -1.57
LINC00501-201ENST00000425388 C18orf65Q6ZTR6 163 aa5.24□□□□□ -1.57
LINC00501-201ENST00000425388 PRO0255Q9UI72 69 aa5.24□□□□□ -1.57
LINC00501-201ENST00000425388 BAHCC1Q9P281 2608 aa5.24□□□□□ -1.57
LINC00501-201ENST00000425388 TENM4Q6N022 2769 aa5.24□□□□□ -1.57
LINC00501-201ENST00000425388 GIG44P09565 113 aaPredicted RBP5.23□□□□□ -1.57
LINC00501-201ENST00000425388 DEFB136Q30KP8 78 aa5.23□□□□□ -1.57
LINC00501-201ENST00000425388 WFDC10BQ8IUB3 73 aa5.23□□□□□ -1.57
LINC00501-201ENST00000425388 UTP20O75691 2785 aaKnown RBP5.23□□□□□ -1.57
LINC00501-201ENST00000425388 Q8NAQ8 132 aa5.23□□□□□ -1.57
LINC00501-201ENST00000425388 C7orf33Q8WU49 177 aa5.23□□□□□ -1.57
LINC00501-201ENST00000425388 CASC10Q5T4H9 136 aa5.22□□□□□ -1.57
LINC00501-201ENST00000425388 APCP25054 2843 aa5.21□□□□□ -1.57
LINC00501-201ENST00000425388 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.57
LINC00501-201ENST00000425388 MAPK1IP1LQ8NDC0 245 aa5.21□□□□□ -1.57
LINC00501-201ENST00000425388 ABCA12Q86UK0 2595 aa5.21□□□□□ -1.57
LINC00501-201ENST00000425388 CRYBG3Q68DQ2 2970 aa5.21□□□□□ -1.58
LINC00501-201ENST00000425388 LCE2BO14633 110 aa5.21□□□□□ -1.58
LINC00501-201ENST00000425388 RTL8CO15255 209 aa5.21□□□□□ -1.58
LINC00501-201ENST00000425388 Q6ZRX8 168 aa5.21□□□□□ -1.58
LINC00501-201ENST00000425388 PRR34Q9NV39 138 aa5.21□□□□□ -1.58
LINC00501-201ENST00000425388 CENPEQ02224 2701 aa5.21□□□□□ -1.58
LINC00501-201ENST00000425388 POLQO75417 2590 aa5.2□□□□□ -1.58
LINC00501-201ENST00000425388 ASH1LQ9NR48 2969 aaKnown RBP5.2□□□□□ -1.58
LINC00501-201ENST00000425388 CELSR2Q9HCU4 2923 aa5.2□□□□□ -1.58
LINC00501-201ENST00000425388 CAMK2N2Q96S95 79 aa5.2□□□□□ -1.58
LINC00501-201ENST00000425388 RETNLBQ9BQ08 111 aa5.2□□□□□ -1.58
LINC00501-201ENST00000425388 SVEP1Q4LDE5 3571 aa5.19□□□□□ -1.58
LINC00501-201ENST00000425388 SETXQ7Z333 2677 aaKnown RBP5.19□□□□□ -1.58
LINC00501-201ENST00000425388 DEFB130BP0DP73 79 aa5.19□□□□□ -1.58
LINC00501-201ENST00000425388 DEFB130AP0DP74 79 aa5.19□□□□□ -1.58
LINC00501-201ENST00000425388 KRTAP1-1Q07627 177 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms