RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 PLAC8Q9NZF1 115 aa6.53□□□□□ -1.36
MDC1-205ENST00000425072 TSPAN13O95857 204 aa6.52□□□□□ -1.37
MDC1-205ENST00000425072 KRTAP10-1P60331 282 aa6.52□□□□□ -1.37
MDC1-205ENST00000425072 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
MDC1-205ENST00000425072 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.37
MDC1-205ENST00000425072 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
MDC1-205ENST00000425072 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
MDC1-205ENST00000425072 TRBV7-6A0A0J9YX20 115 aa6.51□□□□□ -1.37
MDC1-205ENST00000425072 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
MDC1-205ENST00000425072 H3BUT2 72 aa6.51□□□□□ -1.37
MDC1-205ENST00000425072 PANO1I0J062 215 aa6.51□□□□□ -1.37
MDC1-205ENST00000425072 UBE2BP63146 152 aa6.51□□□□□ -1.37
MDC1-205ENST00000425072 HERC1Q15751 4861 aa6.51□□□□□ -1.37
MDC1-205ENST00000425072 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
MDC1-205ENST00000425072 PRYO14603 147 aa6.5□□□□□ -1.37
MDC1-205ENST00000425072 FABP2P12104 132 aa6.5□□□□□ -1.37
MDC1-205ENST00000425072 Q6ZSA8 131 aa6.5□□□□□ -1.37
MDC1-205ENST00000425072 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
MDC1-205ENST00000425072 ZNF73O43830 326 aaPredicted RBP6.49□□□□□ -1.37
MDC1-205ENST00000425072 PHF5AQ7RTV0 110 aaKnown RBP6.49□□□□□ -1.37
MDC1-205ENST00000425072 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
MDC1-205ENST00000425072 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
MDC1-205ENST00000425072 A0A1W2PPM0 123 aa6.48□□□□□ -1.37
MDC1-205ENST00000425072 INAFM2P0DMQ5 153 aa6.48□□□□□ -1.37
MDC1-205ENST00000425072 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
MDC1-205ENST00000425072 C6orf99Q4VX62 202 aa6.48□□□□□ -1.37
MDC1-205ENST00000425072 REG3GQ6UW15 175 aa6.48□□□□□ -1.37
MDC1-205ENST00000425072 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
MDC1-205ENST00000425072 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
MDC1-205ENST00000425072 TRIAP1O43715 76 aa6.47□□□□□ -1.37
MDC1-205ENST00000425072 SLC25A20O43772 301 aa6.46□□□□□ -1.38
MDC1-205ENST00000425072 COX7BP24311 80 aa6.46□□□□□ -1.38
MDC1-205ENST00000425072 SPRR1AP35321 89 aa6.46□□□□□ -1.38
MDC1-205ENST00000425072 NAA38Q9BRA0 125 aaKnown RBP6.46□□□□□ -1.38
MDC1-205ENST00000425072 A0A1B0GX51 115 aa6.45□□□□□ -1.38
MDC1-205ENST00000425072 GTF2H5Q6ZYL4 71 aa6.45□□□□□ -1.38
MDC1-205ENST00000425072 SCXQ7RTU7 201 aa6.45□□□□□ -1.38
MDC1-205ENST00000425072 PKD1P98161 4303 aa6.44□□□□□ -1.38
MDC1-205ENST00000425072 ATXN8Q156A1 80 aa6.44□□□□□ -1.38
MDC1-205ENST00000425072 H0Y9J4 135 aa6.43□□□□□ -1.38
MDC1-205ENST00000425072 BCE1O60756 84 aa6.43□□□□□ -1.38
MDC1-205ENST00000425072 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
MDC1-205ENST00000425072 DHRS4-AS1Q9P1J3 65 aa6.43□□□□□ -1.38
MDC1-205ENST00000425072 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
MDC1-205ENST00000425072 FAT2Q9NYQ8 4349 aa6.43□□□□□ -1.38
MDC1-205ENST00000425072 hADV29S1A0JD25 119 aa6.42□□□□□ -1.38
MDC1-205ENST00000425072 B5MCH6 92 aa6.42□□□□□ -1.38
MDC1-205ENST00000425072 KRTAP4-16G5E9R7 235 aaPredicted RBP6.42□□□□□ -1.38
MDC1-205ENST00000425072 TRACP01848 142 aa6.42□□□□□ -1.38
MDC1-205ENST00000425072 LINC00575Q6W349 94 aa6.42□□□□□ -1.38
MDC1-205ENST00000425072 FAM19A1Q7Z5A9 133 aa6.42□□□□□ -1.38
MDC1-205ENST00000425072 H3BQ85 93 aa6.41□□□□□ -1.38
MDC1-205ENST00000425072 LST1O00453 97 aa6.41□□□□□ -1.38
MDC1-205ENST00000425072 TCL1BO95988 128 aa6.41□□□□□ -1.38
MDC1-205ENST00000425072 DNAL4O96015 105 aa6.41□□□□□ -1.38
MDC1-205ENST00000425072 Q6ZRX8 168 aa6.41□□□□□ -1.38
MDC1-205ENST00000425072 PSORS1C2Q9UIG4 136 aa6.41□□□□□ -1.38
MDC1-205ENST00000425072 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 A0A1B0GV90 55 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 K7EP34 96 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 UBE2AP49459 152 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 XGP55808 180 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 C1orf137Q5JT78 98 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 CLEC2BQ92478 149 aa6.4□□□□□ -1.38
MDC1-205ENST00000425072 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
MDC1-205ENST00000425072 KRTAP4-5Q9BYR2 181 aa6.39□□□□□ -1.39
MDC1-205ENST00000425072 H3BMG7 143 aa6.38□□□□□ -1.39
MDC1-205ENST00000425072 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
MDC1-205ENST00000425072 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.38□□□□□ -1.39
MDC1-205ENST00000425072 ZNF861PO60384 105 aa6.37□□□□□ -1.39
MDC1-205ENST00000425072 CDK2AP2O75956 126 aa6.37□□□□□ -1.39
MDC1-205ENST00000425072 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
MDC1-205ENST00000425072 F8W1H4 67 aa6.36□□□□□ -1.39
MDC1-205ENST00000425072 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
MDC1-205ENST00000425072 SMCR5Q8TEV8 140 aa6.36□□□□□ -1.39
MDC1-205ENST00000425072 ORMDL1Q9P0S3 153 aa6.36□□□□□ -1.39
MDC1-205ENST00000425072 TMEM256-PLSCR3K7ERE1 68 aa6.35□□□□□ -1.39
MDC1-205ENST00000425072 BAALC-AS2P0C853 105 aa6.35□□□□□ -1.39
MDC1-205ENST00000425072 PRLHP81277 87 aa6.35□□□□□ -1.39
MDC1-205ENST00000425072 Q9BRP9 147 aa6.35□□□□□ -1.39
MDC1-205ENST00000425072 HIGD2AQ9BW72 106 aa6.35□□□□□ -1.39
MDC1-205ENST00000425072 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
MDC1-205ENST00000425072 C9JAW5 83 aa6.34□□□□□ -1.39
MDC1-205ENST00000425072 HAMPP81172 84 aa6.34□□□□□ -1.39
MDC1-205ENST00000425072 PPDPFLQ8WWR9 84 aa6.34□□□□□ -1.39
MDC1-205ENST00000425072 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
MDC1-205ENST00000425072 RPL37AP61513 92 aaKnown RBP6.33□□□□□ -1.4
MDC1-205ENST00000425072 Q6ZQY7 126 aa6.33□□□□□ -1.4
MDC1-205ENST00000425072 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
MDC1-205ENST00000425072 DNAH5Q8TE73 4624 aa6.32□□□□□ -1.4
MDC1-205ENST00000425072 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
MDC1-205ENST00000425072 H3BT86 120 aa6.32□□□□□ -1.4
MDC1-205ENST00000425072 ANKRD29Q8N6D5 301 aa6.32□□□□□ -1.4
MDC1-205ENST00000425072 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
MDC1-205ENST00000425072 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
MDC1-205ENST00000425072 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
MDC1-205ENST00000425072 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
MDC1-205ENST00000425072 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
MDC1-205ENST00000425072 LINC01600Q96MT4 127 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms