RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SSBP3-AS1Q7Z2R9 100 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 LY6G6CO95867 125 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 ANGP03950 147 aaKnown RBP1.56□□□□□ -2.16
PMS1-209ENST00000424059 RPL39P5Q59GN2 51 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 TMEM167AQ8TBQ9 72 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 SORL1Q92673 2214 aa1.56□□□□□ -2.16
PMS1-209ENST00000424059 G3V318 75 aa1.55□□□□□ -2.16
PMS1-209ENST00000424059 TECTAO75443 2155 aa1.55□□□□□ -2.16
PMS1-209ENST00000424059 IGLV5-48A0A075B6I7 105 aa1.54□□□□□ -2.16
PMS1-209ENST00000424059 LYNX1G3V0Z9 82 aa1.54□□□□□ -2.16
PMS1-209ENST00000424059 DEFB104AQ8WTQ1 72 aa1.54□□□□□ -2.16
PMS1-209ENST00000424059 CRIPTQ9P021 101 aa1.54□□□□□ -2.16
PMS1-209ENST00000424059 DEFB108AA8MXU0 73 aa1.53□□□□□ -2.16
PMS1-209ENST00000424059 STATHP02808 62 aa1.53□□□□□ -2.16
PMS1-209ENST00000424059 PCOTHQ58A44 107 aa1.53□□□□□ -2.16
PMS1-209ENST00000424059 C10orf55Q5SWW7 151 aa1.52□□□□□ -2.17
PMS1-209ENST00000424059 PRR9Q5T870 116 aa1.52□□□□□ -2.17
PMS1-209ENST00000424059 PTPRQQ9UMZ3 2332 aa1.52□□□□□ -2.17
PMS1-209ENST00000424059 USF3Q68DE3 2245 aa1.52□□□□□ -2.17
PMS1-209ENST00000424059 IGKV2-24A0A0C4DH68 120 aa1.52□□□□□ -2.17
PMS1-209ENST00000424059 SPTY2D1-AS1A0A0U1RR47 76 aa1.52□□□□□ -2.17
PMS1-209ENST00000424059 WFDC13Q8IUB5 93 aa1.52□□□□□ -2.17
PMS1-209ENST00000424059 ATRXP46100 2492 aa1.51□□□□□ -2.17
PMS1-209ENST00000424059 PDE4DIPQ5VU43 2346 aa1.51□□□□□ -2.17
PMS1-209ENST00000424059 LY6EQ16553 131 aa1.51□□□□□ -2.17
PMS1-209ENST00000424059 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
PMS1-209ENST00000424059 Q6ZRX8 168 aa1.51□□□□□ -2.17
PMS1-209ENST00000424059 TP53AIP1Q9HCN2 124 aa1.51□□□□□ -2.17
PMS1-209ENST00000424059 K7EIM0 57 aa1.5□□□□□ -2.17
PMS1-209ENST00000424059 INE1O15225 51 aa1.5□□□□□ -2.17
PMS1-209ENST00000424059 DEFB134Q4QY38 66 aa1.5□□□□□ -2.17
PMS1-209ENST00000424059 GVQW2A0A096LPI5 108 aaPredicted RBP1.5□□□□□ -2.17
PMS1-209ENST00000424059 WFDC10BQ8IUB3 73 aa1.5□□□□□ -2.17
PMS1-209ENST00000424059 PLAC4Q8WY50 150 aa1.5□□□□□ -2.17
PMS1-209ENST00000424059 URB1O60287 2271 aaKnown RBP1.5□□□□□ -2.17
PMS1-209ENST00000424059 H0YAA0 97 aa1.49□□□□□ -2.17
PMS1-209ENST00000424059 MINOS1Q5TGZ0 78 aa1.49□□□□□ -2.17
PMS1-209ENST00000424059 PP632Q6XCG6 107 aa1.49□□□□□ -2.17
PMS1-209ENST00000424059 C6orf48Q9UBA6 75 aa1.49□□□□□ -2.17
PMS1-209ENST00000424059 ANKRD17O75179 2603 aaKnown RBP1.49□□□□□ -2.17
PMS1-209ENST00000424059 ZFHX2Q9C0A1 2572 aaPredicted RBP1.48□□□□□ -2.17
PMS1-209ENST00000424059 A8MTW9 85 aa1.48□□□□□ -2.17
PMS1-209ENST00000424059 IGFL1Q6UW32 110 aa1.48□□□□□ -2.17
PMS1-209ENST00000424059 RTTNQ86VV8 2226 aa1.48□□□□□ -2.17
PMS1-209ENST00000424059 Q6ZSA8 131 aa1.47□□□□□ -2.17
PMS1-209ENST00000424059 CACNA1AO00555 2505 aa1.47□□□□□ -2.17
PMS1-209ENST00000424059 Q6ZRN7 208 aaPredicted RBP1.47□□□□□ -2.17
PMS1-209ENST00000424059 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
PMS1-209ENST00000424059 TOMM7Q9P0U1 55 aa1.47□□□□□ -2.17
PMS1-209ENST00000424059 MMP24-AS1A0A0U1RRL7 71 aa1.46□□□□□ -2.18
PMS1-209ENST00000424059 H0YGG7 62 aa1.46□□□□□ -2.18
PMS1-209ENST00000424059 COX14Q96I36 57 aa1.46□□□□□ -2.18
PMS1-209ENST00000424059 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
PMS1-209ENST00000424059 ASXL3Q9C0F0 2248 aa1.45□□□□□ -2.18
PMS1-209ENST00000424059 MRPL34Q9BQ48 92 aaKnown RBP1.45□□□□□ -2.18
PMS1-209ENST00000424059 KAAG1Q9UBP8 84 aa1.45□□□□□ -2.18
PMS1-209ENST00000424059 AHCTF1Q8WYP5 2266 aa1.44□□□□□ -2.18
PMS1-209ENST00000424059 DOPEY2Q9Y3R5 2298 aa1.44□□□□□ -2.18
PMS1-209ENST00000424059 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
PMS1-209ENST00000424059 ABCA1O95477 2261 aa1.44□□□□□ -2.18
PMS1-209ENST00000424059 ASCC3Q8N3C0 2202 aaKnown RBP1.44□□□□□ -2.18
PMS1-209ENST00000424059 KLK9Q2XQG4 91 aa1.44□□□□□ -2.18
PMS1-209ENST00000424059 LELP1Q5T871 98 aa1.44□□□□□ -2.18
PMS1-209ENST00000424059 C10orf99Q6UWK7 81 aa1.44□□□□□ -2.18
PMS1-209ENST00000424059 BRWD1Q9NSI6 2320 aa1.43□□□□□ -2.18
PMS1-209ENST00000424059 NEBP20929 6669 aa1.43□□□□□ -2.18
PMS1-209ENST00000424059 CLPSL2Q6UWE3 100 aa1.43□□□□□ -2.18
PMS1-209ENST00000424059 COX6B2Q6YFQ2 88 aa1.43□□□□□ -2.18
PMS1-209ENST00000424059 DEFB131AP59861 70 aa1.42□□□□□ -2.18
PMS1-209ENST00000424059 H1FX-AS1Q4G0G2 97 aa1.42□□□□□ -2.18
PMS1-209ENST00000424059 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.42□□□□□ -2.182e-12■■■■■ 48.7
PMS1-209ENST00000424059 PLCE1Q9P212 2302 aa1.42□□□□□ -2.18
PMS1-209ENST00000424059 APELAP0DMC3 54 aa1.42□□□□□ -2.18
PMS1-209ENST00000424059 NOTCH1P46531 2555 aa1.41□□□□□ -2.18
PMS1-209ENST00000424059 DEFB130BP0DP73 79 aa1.41□□□□□ -2.18
PMS1-209ENST00000424059 DEFB130AP0DP74 79 aa1.41□□□□□ -2.18
PMS1-209ENST00000424059 KNL1Q8NG31 2342 aa1.4□□□□□ -2.19
PMS1-209ENST00000424059 CNTRLQ7Z7A1 2325 aa1.4□□□□□ -2.19
PMS1-209ENST00000424059 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
PMS1-209ENST00000424059 CNOT1A5YKK6 2376 aaKnown RBP1.4□□□□□ -2.19
PMS1-209ENST00000424059 RPL37P61927 97 aaKnown RBP1.39□□□□□ -2.19
PMS1-209ENST00000424059 DEFB105AQ8NG35 78 aa1.39□□□□□ -2.19
PMS1-209ENST00000424059 DEFB123Q8N688 67 aa1.39□□□□□ -2.19
PMS1-209ENST00000424059 NAV3Q8IVL0 2385 aa1.38□□□□□ -2.19
PMS1-209ENST00000424059 TRIOBPQ9H2D6 2365 aa1.38□□□□□ -2.19
PMS1-209ENST00000424059 USP24Q9UPU5 2620 aa1.38□□□□□ -2.19
PMS1-209ENST00000424059 FLG2Q5D862 2391 aaPredicted RBP1.38□□□□□ -2.19
PMS1-209ENST00000424059 DEFB1P60022 68 aa1.38□□□□□ -2.19
PMS1-209ENST00000424059 FN1P02751 2386 aaKnown RBP1.38□□□□□ -2.19
PMS1-209ENST00000424059 KRTAP10-10P60014 251 aa1.37□□□□□ -2.19
PMS1-209ENST00000424059 UNQ6190/PRO20217Q6UXQ8 127 aa1.37□□□□□ -2.19
PMS1-209ENST00000424059 UBE2DNLQ8IWF7 75 aa1.37□□□□□ -2.19
PMS1-209ENST00000424059 A0A0C4DFX4 3053 aa1.37□□□□□ -2.19
PMS1-209ENST00000424059 CACNA1EQ15878 2313 aa1.37□□□□□ -2.19
PMS1-209ENST00000424059 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
PMS1-209ENST00000424059 USMG5Q96IX5 58 aa1.37□□□□□ -2.19
PMS1-209ENST00000424059 COL6A6A6NMZ7 2263 aa1.36□□□□□ -2.19
PMS1-209ENST00000424059 K7EIL1 84 aa1.36□□□□□ -2.19
PMS1-209ENST00000424059 DEFB109BQ30KR1 87 aa1.36□□□□□ -2.19
PMS1-209ENST00000424059 CHD7Q9P2D1 2997 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms