RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 ERASQ7Z444 233 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 Q9BRP9 147 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 NAT8Q9UHE5 227 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 LAMTOR2Q9Y2Q5 125 aa3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 CHTOPQ9Y3Y2 248 aaKnown RBP3.9□□□□□ -1.79
HLA-DQA1-204ENST00000422863 IGLV5-39A0A0G2JS06 123 aa3.89□□□□□ -1.79
HLA-DQA1-204ENST00000422863 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
HLA-DQA1-204ENST00000422863 H3BRM9 83 aa3.89□□□□□ -1.79
HLA-DQA1-204ENST00000422863 BOD1L2Q8IYS8 172 aa3.89□□□□□ -1.79
HLA-DQA1-204ENST00000422863 ST20-AS1Q8NBB2 130 aa3.89□□□□□ -1.79
HLA-DQA1-204ENST00000422863 KCNQ1DNQ9H478 68 aa3.89□□□□□ -1.79
HLA-DQA1-204ENST00000422863 H7C2G1 150 aa3.88□□□□□ -1.79
HLA-DQA1-204ENST00000422863 NDUFA6P56556 154 aa3.88□□□□□ -1.79
HLA-DQA1-204ENST00000422863 PMVKQ15126 192 aa3.88□□□□□ -1.79
HLA-DQA1-204ENST00000422863 KIAA1644Q3SXP7 199 aa3.88□□□□□ -1.79
HLA-DQA1-204ENST00000422863 UQCC3Q6UW78 93 aa3.88□□□□□ -1.79
HLA-DQA1-204ENST00000422863 LIMD2Q9BT23 127 aa3.88□□□□□ -1.79
HLA-DQA1-204ENST00000422863 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
HLA-DQA1-204ENST00000422863 TRAV9-1A0A075B6T8 112 aa3.87□□□□□ -1.79
HLA-DQA1-204ENST00000422863 K7EMI3 77 aa3.87□□□□□ -1.79
HLA-DQA1-204ENST00000422863 MT2AP02795 61 aa3.87□□□□□ -1.79
HLA-DQA1-204ENST00000422863 G0S2P27469 103 aa3.87□□□□□ -1.79
HLA-DQA1-204ENST00000422863 ATP5L2Q7Z4Y8 100 aa3.87□□□□□ -1.79
HLA-DQA1-204ENST00000422863 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
HLA-DQA1-204ENST00000422863 APOC3P02656 99 aa3.86□□□□□ -1.79
HLA-DQA1-204ENST00000422863 SMIM13P0DJ93 91 aa3.86□□□□□ -1.79
HLA-DQA1-204ENST00000422863 ZNF22P17026 224 aaPredicted RBP3.86□□□□□ -1.79
HLA-DQA1-204ENST00000422863 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
HLA-DQA1-204ENST00000422863 SVBPQ8N300 66 aa3.86□□□□□ -1.79
HLA-DQA1-204ENST00000422863 MT1FP04733 61 aa3.85□□□□□ -1.79
HLA-DQA1-204ENST00000422863 C5orf52A6NGY3 159 aa3.84□□□□□ -1.79
HLA-DQA1-204ENST00000422863 IGLC3P0DOY3 106 aa3.84□□□□□ -1.79
HLA-DQA1-204ENST00000422863 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
HLA-DQA1-204ENST00000422863 Q6ZRX8 168 aa3.84□□□□□ -1.79
HLA-DQA1-204ENST00000422863 TMEM218A2RU14 115 aa3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 DDTP30046 118 aa3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 MEIG1Q5JSS6 88 aa3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 C10orf91Q5T1B1 145 aa3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 TMEM170BQ5T4T1 132 aa3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 C1orf195Q5TG92 126 aa3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 MIR7-3HGQ8N6C7 128 aa3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
HLA-DQA1-204ENST00000422863 C11orf86A6NJI1 115 aa3.82□□□□□ -1.8
HLA-DQA1-204ENST00000422863 PEA15Q15121 130 aa3.82□□□□□ -1.8
HLA-DQA1-204ENST00000422863 LINC00846Q9NV44 126 aa3.82□□□□□ -1.8
HLA-DQA1-204ENST00000422863 A0A0G2JQZ4 141 aa3.81□□□□□ -1.8
HLA-DQA1-204ENST00000422863 C20orf202A1L168 122 aa3.81□□□□□ -1.8
HLA-DQA1-204ENST00000422863 PCP4P48539 62 aa3.81□□□□□ -1.8
HLA-DQA1-204ENST00000422863 SNRPEP62304 92 aaKnown RBP3.81□□□□□ -1.8
HLA-DQA1-204ENST00000422863 SEC11CQ9BY50 192 aa3.81□□□□□ -1.8
HLA-DQA1-204ENST00000422863 SMCO4Q9NRQ5 59 aa3.81□□□□□ -1.8
HLA-DQA1-204ENST00000422863 A0A1B0GV90 55 aa3.8□□□□□ -1.8
HLA-DQA1-204ENST00000422863 TSTD3H0UI37 97 aa3.8□□□□□ -1.8
HLA-DQA1-204ENST00000422863 MT-ND4LP03901 98 aa3.8□□□□□ -1.8
HLA-DQA1-204ENST00000422863 C21orf62-AS1Q17RA5 79 aa3.8□□□□□ -1.8
HLA-DQA1-204ENST00000422863 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
HLA-DQA1-204ENST00000422863 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 LINC00614P0C842 121 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 S100A2P29034 98 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 FABP9Q0Z7S8 132 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 Q1RN00 199 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 SFTA2Q6UW10 78 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 ATP11AUNQ6ZP68 121 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 C14orf144Q96I85 54 aa3.79□□□□□ -1.8
HLA-DQA1-204ENST00000422863 COLCA2A8K830 154 aa3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 JOSD1Q15040 202 aaPredicted RBP3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 S100A7L2Q5SY68 101 aa3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 FA2HQ7L5A8 372 aa3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 SMIM29Q86T20 159 aa3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 BAGE3Q86Y29 109 aa3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 DEFB105AQ8NG35 78 aa3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 LAMTOR3Q9UHA4 124 aa3.78□□□□□ -1.8
HLA-DQA1-204ENST00000422863 TRAV23DV6A0A075B6W5 121 aa3.77□□□□□ -1.81
HLA-DQA1-204ENST00000422863 A0A096LNJ9 63 aa3.77□□□□□ -1.81
HLA-DQA1-204ENST00000422863 LINC01549A6NIU2 74 aa3.77□□□□□ -1.81
HLA-DQA1-204ENST00000422863 PMCHL1Q16048 86 aa3.77□□□□□ -1.81
HLA-DQA1-204ENST00000422863 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
HLA-DQA1-204ENST00000422863 TMEM223A0PJW6 202 aa3.76□□□□□ -1.81
HLA-DQA1-204ENST00000422863 SPRR1BP22528 89 aa3.76□□□□□ -1.81
HLA-DQA1-204ENST00000422863 CD164Q04900 197 aa3.76□□□□□ -1.81
HLA-DQA1-204ENST00000422863 PCP2Q8IVA1 136 aa3.76□□□□□ -1.81
HLA-DQA1-204ENST00000422863 ANAPC16Q96DE5 110 aa3.76□□□□□ -1.81
HLA-DQA1-204ENST00000422863 PRO1933Q9H354 126 aa3.76□□□□□ -1.81
HLA-DQA1-204ENST00000422863 TRBV10-2A0A0K0K1G8 114 aa3.75□□□□□ -1.81
HLA-DQA1-204ENST00000422863 ZNF73O43830 326 aaPredicted RBP3.75□□□□□ -1.81
HLA-DQA1-204ENST00000422863 NPC2P61916 151 aa3.75□□□□□ -1.81
HLA-DQA1-204ENST00000422863 SLC25A34Q6PIV7 304 aa3.75□□□□□ -1.81
HLA-DQA1-204ENST00000422863 OBSCN-AS1Q96MR7 158 aa3.75□□□□□ -1.81
HLA-DQA1-204ENST00000422863 HSBP1L1C9JCN9 74 aa3.74□□□□□ -1.81
HLA-DQA1-204ENST00000422863 DLEU1O43261 78 aa3.74□□□□□ -1.81
HLA-DQA1-204ENST00000422863 RHEBQ15382 184 aa3.74□□□□□ -1.81
HLA-DQA1-204ENST00000422863 TAL2Q16559 108 aa3.74□□□□□ -1.81
HLA-DQA1-204ENST00000422863 PYY3Q5JQD4 70 aa3.74□□□□□ -1.81
HLA-DQA1-204ENST00000422863 Q5XG85 94 aa3.74□□□□□ -1.81
HLA-DQA1-204ENST00000422863 URB1-AS1Q96HZ7 61 aa3.74□□□□□ -1.81
HLA-DQA1-204ENST00000422863 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 TRBV20-1A0A075B6N2 111 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 FAM236DA0A1B0GTK5 79 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 M0R143 59 aa3.73□□□□□ -1.81
HLA-DQA1-204ENST00000422863 HBDP02042 147 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms