RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 COX8AP10176 69 aa9.47□□□□□ -0.89
BRAT1-202ENST00000421712 LINC00337Q8N6G1 96 aa9.47□□□□□ -0.89
BRAT1-202ENST00000421712 CBY1Q9Y3M2 126 aa9.47□□□□□ -0.89
BRAT1-202ENST00000421712 SPRR1AP35321 89 aa9.46□□□□□ -0.9
BRAT1-202ENST00000421712 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
BRAT1-202ENST00000421712 C14orf144Q96I85 54 aa9.46□□□□□ -0.9
BRAT1-202ENST00000421712 KRTAP1-4P0C5Y4 121 aa9.45□□□□□ -0.9
BRAT1-202ENST00000421712 HINT1P49773 126 aaPredicted RBP9.44□□□□□ -0.9
BRAT1-202ENST00000421712 KRTAP10-8P60410 259 aa9.44□□□□□ -0.9
BRAT1-202ENST00000421712 A6NDN8 102 aa9.43□□□□□ -0.9
BRAT1-202ENST00000421712 PPDPFQ9H3Y8 114 aa9.43□□□□□ -0.9
BRAT1-202ENST00000421712 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
BRAT1-202ENST00000421712 B5MCH6 92 aa9.42□□□□□ -0.9
BRAT1-202ENST00000421712 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
BRAT1-202ENST00000421712 ZNF73O43830 326 aaPredicted RBP9.42□□□□□ -0.9
BRAT1-202ENST00000421712 PYY3Q5JQD4 70 aa9.42□□□□□ -0.9
BRAT1-202ENST00000421712 HIST1H4GQ99525 98 aa9.42□□□□□ -0.9
BRAT1-202ENST00000421712 DLEU1O43261 78 aa9.41□□□□□ -0.9
BRAT1-202ENST00000421712 SMCR5Q8TEV8 140 aa9.41□□□□□ -0.9
BRAT1-202ENST00000421712 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
BRAT1-202ENST00000421712 RPL13AP40429 203 aaKnown RBP9.4□□□□□ -0.9
BRAT1-202ENST00000421712 SLC25A34Q6PIV7 304 aa9.4□□□□□ -0.9
BRAT1-202ENST00000421712 CRYGAP11844 174 aa9.39□□□□□ -0.91
BRAT1-202ENST00000421712 Q6ZRX8 168 aa9.39□□□□□ -0.91
BRAT1-202ENST00000421712 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
BRAT1-202ENST00000421712 ZNF706Q9Y5V0 76 aaPredicted RBP9.38□□□□□ -0.91
BRAT1-202ENST00000421712 A4D1N5 150 aa9.37□□□□□ -0.91
BRAT1-202ENST00000421712 C6orf99Q4VX62 202 aa9.36□□□□□ -0.91
BRAT1-202ENST00000421712 TNXBP22105 4242 aa9.36□□□□□ -0.91
BRAT1-202ENST00000421712 A0A087X002 238 aa9.35□□□□□ -0.91
BRAT1-202ENST00000421712 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
BRAT1-202ENST00000421712 TYMSOSQ8TAI1 123 aa9.35□□□□□ -0.91
BRAT1-202ENST00000421712 SPRR4Q96PI1 79 aa9.35□□□□□ -0.91
BRAT1-202ENST00000421712 Q9BRP9 147 aa9.35□□□□□ -0.91
BRAT1-202ENST00000421712 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
BRAT1-202ENST00000421712 ERC2-IT1O76042 136 aa9.34□□□□□ -0.91
BRAT1-202ENST00000421712 COX7BP24311 80 aa9.34□□□□□ -0.91
BRAT1-202ENST00000421712 C12orf57Q99622 126 aa9.34□□□□□ -0.91
BRAT1-202ENST00000421712 GAGE2AQ6NT46 116 aa9.33□□□□□ -0.92
BRAT1-202ENST00000421712 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
BRAT1-202ENST00000421712 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
BRAT1-202ENST00000421712 DHRS4-AS1Q9P1J3 65 aa9.31□□□□□ -0.92
BRAT1-202ENST00000421712 ELOF1P60002 83 aaKnown RBP9.29□□□□□ -0.92
BRAT1-202ENST00000421712 KRTAP13-2Q52LG2 175 aa9.29□□□□□ -0.92
BRAT1-202ENST00000421712 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
BRAT1-202ENST00000421712 A0A1B0GWB2 263 aa9.28□□□□□ -0.92
BRAT1-202ENST00000421712 VAMP3Q15836 100 aa9.28□□□□□ -0.92
BRAT1-202ENST00000421712 RAB37Q96AX2 223 aa9.28□□□□□ -0.92
BRAT1-202ENST00000421712 TAL2Q16559 108 aa9.27□□□□□ -0.93
BRAT1-202ENST00000421712 CEND1Q8N111 149 aa9.27□□□□□ -0.93
BRAT1-202ENST00000421712 C3orf22Q8N5N4 141 aa9.27□□□□□ -0.93
BRAT1-202ENST00000421712 ST20-AS1Q8NBB2 130 aa9.27□□□□□ -0.93
BRAT1-202ENST00000421712 UQCR10Q9UDW1 63 aa9.26□□□□□ -0.93
BRAT1-202ENST00000421712 H7C2G1 150 aa9.25□□□□□ -0.93
BRAT1-202ENST00000421712 TSPAN13O95857 204 aa9.25□□□□□ -0.93
BRAT1-202ENST00000421712 CFC1BP0CG36 223 aa9.25□□□□□ -0.93
BRAT1-202ENST00000421712 CFC1P0CG37 223 aa9.25□□□□□ -0.93
BRAT1-202ENST00000421712 LINC00483Q53H64 154 aa9.25□□□□□ -0.93
BRAT1-202ENST00000421712 TMEM238LA0A1B0GVL6 79 aa9.24□□□□□ -0.93
BRAT1-202ENST00000421712 A6NJY4 79 aa9.24□□□□□ -0.93
BRAT1-202ENST00000421712 IGLV9-49A0A0B4J1Y8 123 aa9.23□□□□□ -0.93
BRAT1-202ENST00000421712 LINC00304Q8N9R0 145 aa9.23□□□□□ -0.93
BRAT1-202ENST00000421712 DEFB105AQ8NG35 78 aa9.23□□□□□ -0.93
BRAT1-202ENST00000421712 SLC25A20O43772 301 aa9.22□□□□□ -0.93
BRAT1-202ENST00000421712 NHP2Q9NX24 153 aaKnown RBP9.22□□□□□ -0.93
BRAT1-202ENST00000421712 A0A0B4J2C4 111 aa9.21□□□□□ -0.94
BRAT1-202ENST00000421712 HSD52Q0P140 79 aa9.21□□□□□ -0.94
BRAT1-202ENST00000421712 FXYD2P54710 66 aa9.2□□□□□ -0.94
BRAT1-202ENST00000421712 MOBPQ13875 183 aa9.2□□□□□ -0.94
BRAT1-202ENST00000421712 Q1RN00 199 aa9.2□□□□□ -0.94
BRAT1-202ENST00000421712 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
BRAT1-202ENST00000421712 PRO1933Q9H354 126 aa9.2□□□□□ -0.94
BRAT1-202ENST00000421712 C9orf153Q5TBE3 101 aa9.19□□□□□ -0.94
BRAT1-202ENST00000421712 SMIM6P0DI80 62 aa9.18□□□□□ -0.94
BRAT1-202ENST00000421712 BVES-AS1Q5T3Y7 98 aa9.18□□□□□ -0.94
BRAT1-202ENST00000421712 Q8NBF4 154 aa9.18□□□□□ -0.94
BRAT1-202ENST00000421712 PRO1854Q9UHT4 67 aa9.18□□□□□ -0.94
BRAT1-202ENST00000421712 TEX49A0A1B0GTD5 131 aa9.17□□□□□ -0.94
BRAT1-202ENST00000421712 LINC00575Q6W349 94 aa9.17□□□□□ -0.94
BRAT1-202ENST00000421712 LAMTOR3Q9UHA4 124 aa9.17□□□□□ -0.94
BRAT1-202ENST00000421712 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
BRAT1-202ENST00000421712 SPAG11AQ6PDA7 123 aa9.16□□□□□ -0.94
BRAT1-202ENST00000421712 SPRR1BP22528 89 aa9.15□□□□□ -0.94
BRAT1-202ENST00000421712 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
BRAT1-202ENST00000421712 LOC105371267A0A1B0GV96 52 aa9.14□□□□□ -0.95
BRAT1-202ENST00000421712 PRR4Q16378 134 aa9.13□□□□□ -0.95
BRAT1-202ENST00000421712 SNCGO76070 127 aa9.12□□□□□ -0.95
BRAT1-202ENST00000421712 IGLV5-48A0A075B6I7 105 aa9.1□□□□□ -0.95
BRAT1-202ENST00000421712 H0YGX0 51 aa9.1□□□□□ -0.95
BRAT1-202ENST00000421712 K7ERJ3 54 aa9.1□□□□□ -0.95
BRAT1-202ENST00000421712 Q6ZQY7 126 aa9.1□□□□□ -0.95
BRAT1-202ENST00000421712 PSMB2P49721 201 aa9.09□□□□□ -0.95
BRAT1-202ENST00000421712 LINC01547P58512 204 aaPredicted RBP9.09□□□□□ -0.95
BRAT1-202ENST00000421712 Q8N377 158 aa9.09□□□□□ -0.95
BRAT1-202ENST00000421712 HMCN2Q8NDA2 5059 aa9.09□□□□□ -0.95
BRAT1-202ENST00000421712 SPINK1P00995 79 aa9.08□□□□□ -0.96
BRAT1-202ENST00000421712 CTAG1AP78358 180 aa9.08□□□□□ -0.96
BRAT1-202ENST00000421712 TSTD3H0UI37 97 aa9.07□□□□□ -0.96
BRAT1-202ENST00000421712 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.07□□□□□ -0.96
BRAT1-202ENST00000421712 RETNLBQ9BQ08 111 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms