RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
ABCF3-202ENST00000421340 DIRC1Q969H9 104 aa13.39□□□□□ -0.27
ABCF3-202ENST00000421340 PKHD1P08F94 4074 aa13.38□□□□□ -0.27
ABCF3-202ENST00000421340 COX6CP09669 75 aa13.38□□□□□ -0.27
ABCF3-202ENST00000421340 VAMP3Q15836 100 aa13.38□□□□□ -0.27
ABCF3-202ENST00000421340 LRP1BQ9NZR2 4599 aa13.38□□□□□ -0.27
ABCF3-202ENST00000421340 KRTAP4-16G5E9R7 235 aaPredicted RBP13.37□□□□□ -0.27
ABCF3-202ENST00000421340 TRIAP1O43715 76 aa13.37□□□□□ -0.27
ABCF3-202ENST00000421340 H0YGX0 51 aa13.36□□□□□ -0.27
ABCF3-202ENST00000421340 H3BUT2 72 aa13.36□□□□□ -0.27
ABCF3-202ENST00000421340 CDK2AP2O75956 126 aa13.35□□□□□ -0.27
ABCF3-202ENST00000421340 COX7BP24311 80 aa13.33□□□□□ -0.28
ABCF3-202ENST00000421340 ELOF1P60002 83 aaKnown RBP13.33□□□□□ -0.28
ABCF3-202ENST00000421340 HAMPP81172 84 aa13.33□□□□□ -0.28
ABCF3-202ENST00000421340 LYRM7Q5U5X0 104 aa13.33□□□□□ -0.28
ABCF3-202ENST00000421340 PSORS1C2Q9UIG4 136 aa13.33□□□□□ -0.28
ABCF3-202ENST00000421340 ETDCA0A1B0GVM5 59 aa13.32□□□□□ -0.28
ABCF3-202ENST00000421340 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
ABCF3-202ENST00000421340 BCE1O60756 84 aa13.32□□□□□ -0.28
ABCF3-202ENST00000421340 SCGB1C2P0DMR2 95 aa13.32□□□□□ -0.28
ABCF3-202ENST00000421340 NAA38Q9BRA0 125 aaKnown RBP13.32□□□□□ -0.28
ABCF3-202ENST00000421340 B5MCH6 92 aa13.31□□□□□ -0.28
ABCF3-202ENST00000421340 H0Y9J4 135 aa13.31□□□□□ -0.28
ABCF3-202ENST00000421340 INAFM2P0DMQ5 153 aa13.3□□□□□ -0.28
ABCF3-202ENST00000421340 FABP2P12104 132 aa13.29□□□□□ -0.28
ABCF3-202ENST00000421340 Q6ZRX8 168 aa13.29□□□□□ -0.28
ABCF3-202ENST00000421340 LINC00528Q8N1L1 170 aa13.28□□□□□ -0.28
ABCF3-202ENST00000421340 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.29
ABCF3-202ENST00000421340 TRBV20-1A0A075B6N2 111 aa13.26□□□□□ -0.29
ABCF3-202ENST00000421340 A0A1B0GX51 115 aa13.26□□□□□ -0.29
ABCF3-202ENST00000421340 C1orf137Q5JT78 98 aa13.26□□□□□ -0.29
ABCF3-202ENST00000421340 LINC00575Q6W349 94 aa13.26□□□□□ -0.29
ABCF3-202ENST00000421340 DHRS4-AS1Q9P1J3 65 aa13.25□□□□□ -0.29
ABCF3-202ENST00000421340 SNCGO76070 127 aa13.24□□□□□ -0.29
ABCF3-202ENST00000421340 KRTAP13-1Q8IUC0 172 aa13.24□□□□□ -0.29
ABCF3-202ENST00000421340 UBE2AP49459 152 aa13.23□□□□□ -0.29
ABCF3-202ENST00000421340 SLC25A20O43772 301 aa13.22□□□□□ -0.29
ABCF3-202ENST00000421340 CLEC2BQ92478 149 aa13.22□□□□□ -0.29
ABCF3-202ENST00000421340 LST1O00453 97 aa13.21□□□□□ -0.29
ABCF3-202ENST00000421340 TCL1BO95988 128 aa13.21□□□□□ -0.29
ABCF3-202ENST00000421340 IGLV7-43P04211 117 aa13.21□□□□□ -0.29
ABCF3-202ENST00000421340 FAM218AQ96MZ4 157 aa13.21□□□□□ -0.29
ABCF3-202ENST00000421340 hADV29S1A0JD25 119 aa13.2□□□□□ -0.3
ABCF3-202ENST00000421340 ZNF861PO60384 105 aa13.2□□□□□ -0.3
ABCF3-202ENST00000421340 PRLHP81277 87 aa13.2□□□□□ -0.3
ABCF3-202ENST00000421340 ATXN8Q156A1 80 aa13.2□□□□□ -0.3
ABCF3-202ENST00000421340 Q9BRP9 147 aa13.2□□□□□ -0.3
ABCF3-202ENST00000421340 APOBP04114 4563 aaKnown RBP13.2□□□□□ -0.3
ABCF3-202ENST00000421340 TRACP01848 142 aa13.19□□□□□ -0.3
ABCF3-202ENST00000421340 SMR3BP02814 79 aaPredicted RBP13.19□□□□□ -0.3
ABCF3-202ENST00000421340 SPCS1Q9Y6A9 102 aa13.19□□□□□ -0.3
ABCF3-202ENST00000421340 RPL37AP61513 92 aaKnown RBP13.18□□□□□ -0.3
ABCF3-202ENST00000421340 SMCR5Q8TEV8 140 aa13.18□□□□□ -0.3
ABCF3-202ENST00000421340 K7EP34 96 aa13.15□□□□□ -0.3
ABCF3-202ENST00000421340 EPPK1P58107 5090 aaKnown RBP13.15□□□□□ -0.3
ABCF3-202ENST00000421340 GTF2H5Q6ZYL4 71 aa13.14□□□□□ -0.31
ABCF3-202ENST00000421340 FAM229AH3BQW9 127 aa13.13□□□□□ -0.31
ABCF3-202ENST00000421340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-202ENST00000421340 HIGD2AQ9BW72 106 aa13.13□□□□□ -0.31
ABCF3-202ENST00000421340 A0A1B0GV90 55 aa13.11□□□□□ -0.31
ABCF3-202ENST00000421340 DNAL4O96015 105 aa13.11□□□□□ -0.31
ABCF3-202ENST00000421340 OCIAD2Q56VL3 154 aa13.11□□□□□ -0.31
ABCF3-202ENST00000421340 ERC2-IT1O76042 136 aa13.1□□□□□ -0.31
ABCF3-202ENST00000421340 GHRHP01286 108 aa13.1□□□□□ -0.31
ABCF3-202ENST00000421340 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
ABCF3-202ENST00000421340 H3BMG7 143 aa13.09□□□□□ -0.31
ABCF3-202ENST00000421340 KRTAP10-4P60372 401 aaPredicted RBP13.09□□□□□ -0.31
ABCF3-202ENST00000421340 H3BQ85 93 aa13.08□□□□□ -0.32
ABCF3-202ENST00000421340 Q6ZQY7 126 aa13.08□□□□□ -0.32
ABCF3-202ENST00000421340 SPINK6Q6UWN8 80 aa13.05□□□□□ -0.32
ABCF3-202ENST00000421340 PPDPFLQ8WWR9 84 aa13.05□□□□□ -0.32
ABCF3-202ENST00000421340 ORMDL1Q9P0S3 153 aa13.05□□□□□ -0.32
ABCF3-202ENST00000421340 ZNF706Q9Y5V0 76 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-202ENST00000421340 IGLV5-48A0A075B6I7 105 aa13.04□□□□□ -0.32
ABCF3-202ENST00000421340 Q8N1X5 172 aa13.04□□□□□ -0.32
ABCF3-202ENST00000421340 RYR1P21817 5038 aa13.04□□□□□ -0.32
ABCF3-202ENST00000421340 C9JAW5 83 aa13.02□□□□□ -0.33
ABCF3-202ENST00000421340 UBE2V1Q13404 147 aa13.02□□□□□ -0.33
ABCF3-202ENST00000421340 ST20-AS1Q8NBB2 130 aa13.02□□□□□ -0.33
ABCF3-202ENST00000421340 TMEM256-PLSCR3K7ERE1 68 aa13.01□□□□□ -0.33
ABCF3-202ENST00000421340 BAALC-AS2P0C853 105 aa13.01□□□□□ -0.33
ABCF3-202ENST00000421340 LINC01547P58512 204 aaPredicted RBP13.01□□□□□ -0.33
ABCF3-202ENST00000421340 Q5VSD8 79 aa13.01□□□□□ -0.33
ABCF3-202ENST00000421340 TEX49A0A1B0GTD5 131 aa13□□□□□ -0.33
ABCF3-202ENST00000421340 SPRR1BP22528 89 aa13□□□□□ -0.33
ABCF3-202ENST00000421340 SPRR4Q96PI1 79 aa13□□□□□ -0.33
ABCF3-202ENST00000421340 VPS13BQ7Z7G8 4022 aa12.99□□□□□ -0.33
ABCF3-202ENST00000421340 LINC01600Q96MT4 127 aa12.99□□□□□ -0.33
ABCF3-202ENST00000421340 HSPG2P98160 4391 aa12.98□□□□□ -0.33
ABCF3-202ENST00000421340 H3BT86 120 aa12.98□□□□□ -0.33
ABCF3-202ENST00000421340 Q8N377 158 aa12.98□□□□□ -0.33
ABCF3-202ENST00000421340 F8W1H4 67 aa12.97□□□□□ -0.33
ABCF3-202ENST00000421340 LINC00483Q53H64 154 aa12.97□□□□□ -0.33
ABCF3-202ENST00000421340 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
ABCF3-202ENST00000421340 PRO0461Q9UI25 63 aa12.97□□□□□ -0.33
ABCF3-202ENST00000421340 GAGE2AQ6NT46 116 aa12.95□□□□□ -0.34
ABCF3-202ENST00000421340 ANKRD29Q8N6D5 301 aa12.94□□□□□ -0.34
ABCF3-202ENST00000421340 KIAA1109Q2LD37 5005 aa12.93□□□□□ -0.34
ABCF3-202ENST00000421340 KRTAP17-1Q9BYP8 105 aa12.93□□□□□ -0.34
ABCF3-202ENST00000421340 FAT1Q14517 4588 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms