RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 S100A6P06703 90 aa5.59□□□□□ -1.51
TNFAIP3-202ENST00000420009 SFTA2Q6UW10 78 aa5.59□□□□□ -1.51
TNFAIP3-202ENST00000420009 URB1-AS1Q96HZ7 61 aa5.59□□□□□ -1.51
TNFAIP3-202ENST00000420009 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
TNFAIP3-202ENST00000420009 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
TNFAIP3-202ENST00000420009 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
TNFAIP3-202ENST00000420009 FLGP20930 4061 aaPredicted RBP5.57□□□□□ -1.52
TNFAIP3-202ENST00000420009 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
TNFAIP3-202ENST00000420009 SERF1AO75920 110 aa5.57□□□□□ -1.52
TNFAIP3-202ENST00000420009 GAGE2AQ6NT46 116 aa5.57□□□□□ -1.52
TNFAIP3-202ENST00000420009 ETDCA0A1B0GVM5 59 aa5.56□□□□□ -1.52
TNFAIP3-202ENST00000420009 PCOTHQ58A44 107 aa5.56□□□□□ -1.52
TNFAIP3-202ENST00000420009 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
TNFAIP3-202ENST00000420009 A0A096LNJ9 63 aa5.55□□□□□ -1.52
TNFAIP3-202ENST00000420009 ERC2-IT1O76042 136 aa5.55□□□□□ -1.52
TNFAIP3-202ENST00000420009 LINC00158P58513 81 aa5.55□□□□□ -1.52
TNFAIP3-202ENST00000420009 BAGE3Q86Y29 109 aa5.55□□□□□ -1.52
TNFAIP3-202ENST00000420009 C11orf86A6NJI1 115 aa5.54□□□□□ -1.52
TNFAIP3-202ENST00000420009 NCR3O14931 201 aa5.54□□□□□ -1.52
TNFAIP3-202ENST00000420009 FA2HQ7L5A8 372 aa5.54□□□□□ -1.52
TNFAIP3-202ENST00000420009 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
TNFAIP3-202ENST00000420009 HIST1H2BLQ99880 126 aa5.54□□□□□ -1.52
TNFAIP3-202ENST00000420009 TRBV10-3A0A0K0K1G6 114 aa5.53□□□□□ -1.52
TNFAIP3-202ENST00000420009 A0A0U1RRA0 63 aa5.53□□□□□ -1.52
TNFAIP3-202ENST00000420009 B5MCH6 92 aa5.53□□□□□ -1.52
TNFAIP3-202ENST00000420009 FABP4P15090 132 aa5.53□□□□□ -1.52
TNFAIP3-202ENST00000420009 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
TNFAIP3-202ENST00000420009 LINC00614P0C842 121 aa5.52□□□□□ -1.53
TNFAIP3-202ENST00000420009 TMEM170BQ5T4T1 132 aa5.52□□□□□ -1.53
TNFAIP3-202ENST00000420009 Q9BRP9 147 aa5.52□□□□□ -1.53
TNFAIP3-202ENST00000420009 HSBP1O75506 76 aa5.51□□□□□ -1.53
TNFAIP3-202ENST00000420009 SMIM13P0DJ93 91 aa5.51□□□□□ -1.53
TNFAIP3-202ENST00000420009 S100A2P29034 98 aa5.51□□□□□ -1.53
TNFAIP3-202ENST00000420009 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
TNFAIP3-202ENST00000420009 USH2AO75445 5202 aa5.5□□□□□ -1.53
TNFAIP3-202ENST00000420009 AKR1D1P51857 326 aa5.5□□□□□ -1.53
TNFAIP3-202ENST00000420009 PMCHL1Q16048 86 aa5.5□□□□□ -1.53
TNFAIP3-202ENST00000420009 Q6ZRX8 168 aa5.5□□□□□ -1.53
TNFAIP3-202ENST00000420009 MIR7-3HGQ8N6C7 128 aa5.5□□□□□ -1.53
TNFAIP3-202ENST00000420009 SSPOA2VEC9 5147 aa5.5□□□□□ -1.53
TNFAIP3-202ENST00000420009 M0R2T5 61 aa5.49□□□□□ -1.53
TNFAIP3-202ENST00000420009 HBDP02042 147 aa5.49□□□□□ -1.53
TNFAIP3-202ENST00000420009 C9orf153Q5TBE3 101 aa5.49□□□□□ -1.53
TNFAIP3-202ENST00000420009 TMEM223A0PJW6 202 aa5.48□□□□□ -1.53
TNFAIP3-202ENST00000420009 S100A12P80511 92 aa5.48□□□□□ -1.53
TNFAIP3-202ENST00000420009 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
TNFAIP3-202ENST00000420009 PYY3Q5JQD4 70 aa5.47□□□□□ -1.53
TNFAIP3-202ENST00000420009 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
TNFAIP3-202ENST00000420009 TRBV10-2A0A0K0K1G8 114 aa5.46□□□□□ -1.54
TNFAIP3-202ENST00000420009 LEPROTL1O95214 131 aa5.46□□□□□ -1.54
TNFAIP3-202ENST00000420009 C3orf79P0CE67 100 aa5.46□□□□□ -1.54
TNFAIP3-202ENST00000420009 DDTP30046 118 aa5.46□□□□□ -1.54
TNFAIP3-202ENST00000420009 HERV-K104P63124 156 aa5.46□□□□□ -1.54
TNFAIP3-202ENST00000420009 LIMD2Q9BT23 127 aa5.46□□□□□ -1.54
TNFAIP3-202ENST00000420009 LOC107984156A0A0G2JMH3 177 aa5.45□□□□□ -1.54
TNFAIP3-202ENST00000420009 SMIM6P0DI80 62 aa5.45□□□□□ -1.54
TNFAIP3-202ENST00000420009 JOSD1Q15040 202 aaPredicted RBP5.45□□□□□ -1.54
TNFAIP3-202ENST00000420009 ARL17AQ8IVW1 177 aa5.45□□□□□ -1.54
TNFAIP3-202ENST00000420009 LINC00518Q8N0U6 118 aa5.45□□□□□ -1.54
TNFAIP3-202ENST00000420009 CHTOPQ9Y3Y2 248 aaKnown RBP5.45□□□□□ -1.54
TNFAIP3-202ENST00000420009 LINC00587B1AMM8 73 aa5.44□□□□□ -1.54
TNFAIP3-202ENST00000420009 KRTDAPP60985 99 aa5.44□□□□□ -1.54
TNFAIP3-202ENST00000420009 ST20-AS1Q8NBB2 130 aa5.44□□□□□ -1.54
TNFAIP3-202ENST00000420009 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
TNFAIP3-202ENST00000420009 COX6B2Q6YFQ2 88 aa5.43□□□□□ -1.54
TNFAIP3-202ENST00000420009 IFI27L1Q96BM0 104 aa5.43□□□□□ -1.54
TNFAIP3-202ENST00000420009 C12orf57Q99622 126 aa5.43□□□□□ -1.54
TNFAIP3-202ENST00000420009 SPANXB1Q9NS25 103 aaPredicted RBP5.43□□□□□ -1.54
TNFAIP3-202ENST00000420009 HSPB8Q9UJY1 196 aa5.43□□□□□ -1.54
TNFAIP3-202ENST00000420009 TRAV12-1A0A0B4J245 112 aa5.42□□□□□ -1.54
TNFAIP3-202ENST00000420009 SYS1-DBNDD2H3BUS1 97 aa5.42□□□□□ -1.54
TNFAIP3-202ENST00000420009 MAP1LC3CQ9BXW4 147 aa5.42□□□□□ -1.54
TNFAIP3-202ENST00000420009 TRAV23DV6A0A075B6W5 121 aa5.41□□□□□ -1.54
TNFAIP3-202ENST00000420009 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
TNFAIP3-202ENST00000420009 SPRR1BP22528 89 aa5.41□□□□□ -1.54
TNFAIP3-202ENST00000420009 RPL37P61927 97 aaKnown RBP5.41□□□□□ -1.54
TNFAIP3-202ENST00000420009 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
TNFAIP3-202ENST00000420009 PET117Q6UWS5 81 aa5.41□□□□□ -1.54
TNFAIP3-202ENST00000420009 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
TNFAIP3-202ENST00000420009 MYMXA0A1B0GTQ4 84 aa5.4□□□□□ -1.54
TNFAIP3-202ENST00000420009 HRCT1Q6UXD1 115 aa5.4□□□□□ -1.54
TNFAIP3-202ENST00000420009 H0Y8G0 127 aa5.39□□□□□ -1.55
TNFAIP3-202ENST00000420009 ZNF73O43830 326 aaPredicted RBP5.39□□□□□ -1.55
TNFAIP3-202ENST00000420009 NDUFC2O95298 119 aa5.39□□□□□ -1.55
TNFAIP3-202ENST00000420009 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
TNFAIP3-202ENST00000420009 S100A7L2Q5SY68 101 aa5.39□□□□□ -1.55
TNFAIP3-202ENST00000420009 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
TNFAIP3-202ENST00000420009 ATOH7Q8N100 152 aa5.38□□□□□ -1.55
TNFAIP3-202ENST00000420009 PMCHL2Q9BQD1 86 aa5.38□□□□□ -1.55
TNFAIP3-202ENST00000420009 C20orf202A1L168 122 aa5.37□□□□□ -1.55
TNFAIP3-202ENST00000420009 CD164Q04900 197 aa5.37□□□□□ -1.55
TNFAIP3-202ENST00000420009 Q5XG85 94 aa5.37□□□□□ -1.55
TNFAIP3-202ENST00000420009 SLC25A34Q6PIV7 304 aa5.37□□□□□ -1.55
TNFAIP3-202ENST00000420009 MIEN1Q9BRT3 115 aa5.37□□□□□ -1.55
TNFAIP3-202ENST00000420009 C1orf195Q5TG92 126 aa5.36□□□□□ -1.55
TNFAIP3-202ENST00000420009 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
TNFAIP3-202ENST00000420009 VAMP8Q9BV40 100 aa5.35□□□□□ -1.55
TNFAIP3-202ENST00000420009 LAMTOR3Q9UHA4 124 aa5.35□□□□□ -1.55
TNFAIP3-202ENST00000420009 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
TNFAIP3-202ENST00000420009 LEPROTO15243 131 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms