RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 NEBP20929 6669 aa5.51□□□□□ -1.53
RAPGEF1-205ENST00000419442 LOC389332A0A1B0GUA5 103 aa5.5□□□□□ -1.53
RAPGEF1-205ENST00000419442 ORMDL2Q53FV1 153 aa5.5□□□□□ -1.53
RAPGEF1-205ENST00000419442 ERG28Q9UKR5 140 aa5.5□□□□□ -1.53
RAPGEF1-205ENST00000419442 LAMTOR2Q9Y2Q5 125 aa5.5□□□□□ -1.53
RAPGEF1-205ENST00000419442 K7EMI3 77 aa5.49□□□□□ -1.53
RAPGEF1-205ENST00000419442 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
RAPGEF1-205ENST00000419442 SPINK8P0C7L1 97 aa5.49□□□□□ -1.53
RAPGEF1-205ENST00000419442 COX17Q14061 63 aa5.49□□□□□ -1.53
RAPGEF1-205ENST00000419442 MRPL54Q6P161 138 aaKnown RBP5.49□□□□□ -1.53
RAPGEF1-205ENST00000419442 MAP1LC3AQ9H492 121 aa5.49□□□□□ -1.53
RAPGEF1-205ENST00000419442 KCNQ1DNQ9H478 68 aa5.48□□□□□ -1.53
RAPGEF1-205ENST00000419442 ERC2-IT1O76042 136 aa5.47□□□□□ -1.53
RAPGEF1-205ENST00000419442 MT2AP02795 61 aa5.47□□□□□ -1.53
RAPGEF1-205ENST00000419442 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
RAPGEF1-205ENST00000419442 C14orf144Q96I85 54 aa5.47□□□□□ -1.53
RAPGEF1-205ENST00000419442 IGLV5-39A0A0G2JS06 123 aa5.46□□□□□ -1.54
RAPGEF1-205ENST00000419442 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
RAPGEF1-205ENST00000419442 BAGE3Q86Y29 109 aa5.46□□□□□ -1.54
RAPGEF1-205ENST00000419442 LIMD2Q9BT23 127 aa5.46□□□□□ -1.54
RAPGEF1-205ENST00000419442 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
RAPGEF1-205ENST00000419442 C20orf202A1L168 122 aa5.45□□□□□ -1.54
RAPGEF1-205ENST00000419442 SERF1AO75920 110 aa5.45□□□□□ -1.54
RAPGEF1-205ENST00000419442 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
RAPGEF1-205ENST00000419442 TOMM6Q96B49 74 aa5.45□□□□□ -1.54
RAPGEF1-205ENST00000419442 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
RAPGEF1-205ENST00000419442 LINC00846Q9NV44 126 aa5.45□□□□□ -1.54
RAPGEF1-205ENST00000419442 G0S2P27469 103 aa5.44□□□□□ -1.54
RAPGEF1-205ENST00000419442 ERASQ7Z444 233 aa5.44□□□□□ -1.54
RAPGEF1-205ENST00000419442 PMCHL1Q16048 86 aa5.43□□□□□ -1.54
RAPGEF1-205ENST00000419442 C9orf153Q5TBE3 101 aa5.43□□□□□ -1.54
RAPGEF1-205ENST00000419442 CHCHD1Q96BP2 118 aaKnown RBP5.43□□□□□ -1.54
RAPGEF1-205ENST00000419442 MIEN1Q9BRT3 115 aa5.43□□□□□ -1.54
RAPGEF1-205ENST00000419442 H3BRM9 83 aa5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 M0R143 59 aa5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 MT1FP04733 61 aa5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 Q6Q795 121 aa5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 C18orf32Q8TCD1 76 aa5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 Q9BRP9 147 aa5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 CST9LQ9H4G1 147 aa5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 NXT2Q9NPJ8 142 aaKnown RBP5.42□□□□□ -1.54
RAPGEF1-205ENST00000419442 ZNF625Q96I27 306 aaPredicted RBP5.41□□□□□ -1.54
RAPGEF1-205ENST00000419442 PRO1933Q9H354 126 aa5.41□□□□□ -1.54
RAPGEF1-205ENST00000419442 SCGB3A1Q96QR1 104 aa5.4□□□□□ -1.54
RAPGEF1-205ENST00000419442 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
RAPGEF1-205ENST00000419442 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
RAPGEF1-205ENST00000419442 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
RAPGEF1-205ENST00000419442 SFTA2Q6UW10 78 aa5.39□□□□□ -1.55
RAPGEF1-205ENST00000419442 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
RAPGEF1-205ENST00000419442 HSBP1O75506 76 aa5.38□□□□□ -1.55
RAPGEF1-205ENST00000419442 C3orf79P0CE67 100 aa5.38□□□□□ -1.55
RAPGEF1-205ENST00000419442 IGLC3P0DOY3 106 aa5.38□□□□□ -1.55
RAPGEF1-205ENST00000419442 PMVKQ15126 192 aa5.38□□□□□ -1.55
RAPGEF1-205ENST00000419442 KIAA1644Q3SXP7 199 aa5.38□□□□□ -1.55
RAPGEF1-205ENST00000419442 Q6ZRX8 168 aa5.38□□□□□ -1.55
RAPGEF1-205ENST00000419442 LINC01549A6NIU2 74 aa5.37□□□□□ -1.55
RAPGEF1-205ENST00000419442 NCR3O14931 201 aa5.37□□□□□ -1.55
RAPGEF1-205ENST00000419442 LINC00614P0C842 121 aa5.37□□□□□ -1.55
RAPGEF1-205ENST00000419442 ZNF22P17026 224 aaPredicted RBP5.37□□□□□ -1.55
RAPGEF1-205ENST00000419442 Q5XG85 94 aa5.37□□□□□ -1.55
RAPGEF1-205ENST00000419442 SNHG12Q9BXW3 62 aa5.37□□□□□ -1.55
RAPGEF1-205ENST00000419442 LINC00158P58513 81 aa5.36□□□□□ -1.55
RAPGEF1-205ENST00000419442 KRTDAPP60985 99 aa5.36□□□□□ -1.55
RAPGEF1-205ENST00000419442 HRCT1Q6UXD1 115 aa5.36□□□□□ -1.55
RAPGEF1-205ENST00000419442 BOD1L2Q8IYS8 172 aa5.36□□□□□ -1.55
RAPGEF1-205ENST00000419442 HSPB8Q9UJY1 196 aa5.36□□□□□ -1.55
RAPGEF1-205ENST00000419442 LINC01546A6NGU7 62 aa5.35□□□□□ -1.55
RAPGEF1-205ENST00000419442 CD164Q04900 197 aa5.35□□□□□ -1.55
RAPGEF1-205ENST00000419442 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
RAPGEF1-205ENST00000419442 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
RAPGEF1-205ENST00000419442 A0A1B0GV90 55 aa5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 SYS1-DBNDD2H3BUS1 97 aa5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 SPRR1BP22528 89 aa5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 SPATA45Q537H7 98 aa5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 COL5A1-AS1Q5SY13 56 aa5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 PMCHL2Q9BQD1 86 aa5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 CHTOPQ9Y3Y2 248 aaKnown RBP5.34□□□□□ -1.55
RAPGEF1-205ENST00000419442 A0A0U1RRA0 63 aa5.33□□□□□ -1.56
RAPGEF1-205ENST00000419442 LEPROTL1O95214 131 aa5.33□□□□□ -1.56
RAPGEF1-205ENST00000419442 LINC01545Q5VT33 79 aa5.33□□□□□ -1.56
RAPGEF1-205ENST00000419442 ST20-AS1Q8NBB2 130 aa5.33□□□□□ -1.56
RAPGEF1-205ENST00000419442 A4D1N5 150 aa5.32□□□□□ -1.56
RAPGEF1-205ENST00000419442 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
RAPGEF1-205ENST00000419442 MAP1LC3CQ9BXW4 147 aa5.32□□□□□ -1.56
RAPGEF1-205ENST00000419442 PAM16Q9Y3D7 125 aa5.32□□□□□ -1.56
RAPGEF1-205ENST00000419442 FA2HQ7L5A8 372 aa5.31□□□□□ -1.56
RAPGEF1-205ENST00000419442 HSBP1L1C9JCN9 74 aa5.3□□□□□ -1.56
RAPGEF1-205ENST00000419442 SMIM13P0DJ93 91 aa5.3□□□□□ -1.56
RAPGEF1-205ENST00000419442 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
RAPGEF1-205ENST00000419442 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
RAPGEF1-205ENST00000419442 DLEU1O43261 78 aa5.29□□□□□ -1.56
RAPGEF1-205ENST00000419442 SLC25A34Q6PIV7 304 aa5.29□□□□□ -1.56
RAPGEF1-205ENST00000419442 SMIM29Q86T20 159 aa5.29□□□□□ -1.56
RAPGEF1-205ENST00000419442 HBDP02042 147 aa5.28□□□□□ -1.56
RAPGEF1-205ENST00000419442 LOC107984156A0A0G2JMH3 177 aa5.27□□□□□ -1.57
RAPGEF1-205ENST00000419442 C11orf86A6NJI1 115 aa5.27□□□□□ -1.57
RAPGEF1-205ENST00000419442 COX8AP10176 69 aa5.27□□□□□ -1.57
RAPGEF1-205ENST00000419442 ATP11AUNQ6ZP68 121 aa5.27□□□□□ -1.57
RAPGEF1-205ENST00000419442 Q75L30 129 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms