RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
TRIM48-201ENST00000417545 M0R143 59 aa5.29□□□□□ -1.56
TRIM48-201ENST00000417545 PRYO14603 147 aa5.29□□□□□ -1.56
TRIM48-201ENST00000417545 UBE2AP49459 152 aa5.29□□□□□ -1.56
TRIM48-201ENST00000417545 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
TRIM48-201ENST00000417545 Q5VSD8 79 aa5.29□□□□□ -1.56
TRIM48-201ENST00000417545 REG3GQ6UW15 175 aa5.29□□□□□ -1.56
TRIM48-201ENST00000417545 KRTAP7-1Q8IUC3 87 aa5.29□□□□□ -1.56
TRIM48-201ENST00000417545 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
TRIM48-201ENST00000417545 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
TRIM48-201ENST00000417545 ETDCA0A1B0GVM5 59 aa5.28□□□□□ -1.56
TRIM48-201ENST00000417545 Q1RN00 199 aa5.28□□□□□ -1.56
TRIM48-201ENST00000417545 PSORS1C2Q9UIG4 136 aa5.28□□□□□ -1.56
TRIM48-201ENST00000417545 RPL13AP40429 203 aaKnown RBP5.27□□□□□ -1.57
TRIM48-201ENST00000417545 FAM19A1Q7Z5A9 133 aa5.27□□□□□ -1.57
TRIM48-201ENST00000417545 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
TRIM48-201ENST00000417545 H7C2G1 150 aa5.26□□□□□ -1.57
TRIM48-201ENST00000417545 Q8N1X5 172 aa5.26□□□□□ -1.57
TRIM48-201ENST00000417545 LINC00337Q8N6G1 96 aa5.26□□□□□ -1.57
TRIM48-201ENST00000417545 DIRC1Q969H9 104 aa5.26□□□□□ -1.57
TRIM48-201ENST00000417545 NHP2Q9NX24 153 aaKnown RBP5.26□□□□□ -1.57
TRIM48-201ENST00000417545 DNAH8Q96JB1 4490 aa5.26□□□□□ -1.57
TRIM48-201ENST00000417545 BIRC6Q9NR09 4857 aa5.26□□□□□ -1.57
TRIM48-201ENST00000417545 BCE1O60756 84 aa5.25□□□□□ -1.57
TRIM48-201ENST00000417545 IGLV6-57P01721 117 aa5.25□□□□□ -1.57
TRIM48-201ENST00000417545 FXYD2P54710 66 aa5.25□□□□□ -1.57
TRIM48-201ENST00000417545 BATFQ16520 125 aa5.25□□□□□ -1.57
TRIM48-201ENST00000417545 A0A0B4J2C4 111 aa5.24□□□□□ -1.57
TRIM48-201ENST00000417545 ZNF73O43830 326 aaPredicted RBP5.24□□□□□ -1.57
TRIM48-201ENST00000417545 RPL28P46779 137 aaKnown RBP5.24□□□□□ -1.57
TRIM48-201ENST00000417545 KCNQ1DNQ9H478 68 aa5.24□□□□□ -1.57
TRIM48-201ENST00000417545 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 CFC1BP0CG36 223 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 CFC1P0CG37 223 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 VAMP3Q15836 100 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 BVES-AS1Q5T3Y7 98 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 KRTAP11-1Q8IUC1 163 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 PRO1854Q9UHT4 67 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 PSMB2P49721 201 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 PRLHP81277 87 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 C6orf99Q4VX62 202 aa5.23□□□□□ -1.57
TRIM48-201ENST00000417545 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
TRIM48-201ENST00000417545 COX7BP24311 80 aa5.22□□□□□ -1.57
TRIM48-201ENST00000417545 C21orf62-AS1Q17RA5 79 aa5.22□□□□□ -1.57
TRIM48-201ENST00000417545 SMIM11BQ8TCY0 68 aa5.22□□□□□ -1.57
TRIM48-201ENST00000417545 HIGD2AQ9BW72 106 aa5.22□□□□□ -1.57
TRIM48-201ENST00000417545 RYR1P21817 5038 aa5.21□□□□□ -1.58
TRIM48-201ENST00000417545 K7ERJ3 54 aa5.21□□□□□ -1.58
TRIM48-201ENST00000417545 SLC25A20O43772 301 aa5.21□□□□□ -1.58
TRIM48-201ENST00000417545 SNCGO76070 127 aa5.21□□□□□ -1.58
TRIM48-201ENST00000417545 A0A1B0GWB2 263 aa5.2□□□□□ -1.58
TRIM48-201ENST00000417545 ZNF861PO60384 105 aa5.2□□□□□ -1.58
TRIM48-201ENST00000417545 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
TRIM48-201ENST00000417545 B5MCH6 92 aa5.19□□□□□ -1.58
TRIM48-201ENST00000417545 COX6CP09669 75 aa5.19□□□□□ -1.58
TRIM48-201ENST00000417545 SPRR1AP35321 89 aa5.19□□□□□ -1.58
TRIM48-201ENST00000417545 SPINK6Q6UWN8 80 aa5.19□□□□□ -1.58
TRIM48-201ENST00000417545 Q6ZRX8 168 aa5.19□□□□□ -1.58
TRIM48-201ENST00000417545 TRBV7-6A0A0J9YX20 115 aa5.18□□□□□ -1.58
TRIM48-201ENST00000417545 INAFM2P0DMQ5 153 aa5.18□□□□□ -1.58
TRIM48-201ENST00000417545 ELOF1P60002 83 aaKnown RBP5.18□□□□□ -1.58
TRIM48-201ENST00000417545 DHRS4-AS1Q9P1J3 65 aa5.18□□□□□ -1.58
TRIM48-201ENST00000417545 ZNF706Q9Y5V0 76 aaPredicted RBP5.18□□□□□ -1.58
TRIM48-201ENST00000417545 H0Y9J4 135 aa5.17□□□□□ -1.58
TRIM48-201ENST00000417545 SCGB1C2P0DMR2 95 aa5.17□□□□□ -1.58
TRIM48-201ENST00000417545 HSPG2P98160 4391 aa5.17□□□□□ -1.58
TRIM48-201ENST00000417545 H0YGX0 51 aa5.16□□□□□ -1.58
TRIM48-201ENST00000417545 TSPAN13O95857 204 aa5.16□□□□□ -1.58
TRIM48-201ENST00000417545 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
TRIM48-201ENST00000417545 SMCR5Q8TEV8 140 aa5.16□□□□□ -1.58
TRIM48-201ENST00000417545 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
TRIM48-201ENST00000417545 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.58
TRIM48-201ENST00000417545 LYRM7Q5U5X0 104 aa5.15□□□□□ -1.58
TRIM48-201ENST00000417545 A0A1B0GV90 55 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 hADV29S1A0JD25 119 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 TRIAP1O43715 76 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 DNAL4O96015 105 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
TRIM48-201ENST00000417545 KRTAP13-1Q8IUC0 172 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 KRTAP4-5Q9BYR2 181 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 H3BS24 57 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 Q9BRP9 147 aa5.14□□□□□ -1.59
TRIM48-201ENST00000417545 VPS13BQ7Z7G8 4022 aa5.13□□□□□ -1.59
TRIM48-201ENST00000417545 COL5A1-AS1Q5SY13 56 aa5.13□□□□□ -1.59
TRIM48-201ENST00000417545 GAGE2AQ6NT46 116 aa5.13□□□□□ -1.59
TRIM48-201ENST00000417545 LINC00575Q6W349 94 aa5.13□□□□□ -1.59
TRIM48-201ENST00000417545 DEFB105AQ8NG35 78 aa5.13□□□□□ -1.59
TRIM48-201ENST00000417545 NAA38Q9BRA0 125 aaKnown RBP5.13□□□□□ -1.59
TRIM48-201ENST00000417545 SNHG12Q9BXW3 62 aa5.13□□□□□ -1.59
TRIM48-201ENST00000417545 KRTAP17-1Q9BYP8 105 aa5.13□□□□□ -1.59
TRIM48-201ENST00000417545 H3BUT2 72 aa5.12□□□□□ -1.59
TRIM48-201ENST00000417545 ERC2-IT1O76042 136 aa5.11□□□□□ -1.59
TRIM48-201ENST00000417545 CLEC2BQ92478 149 aa5.11□□□□□ -1.59
TRIM48-201ENST00000417545 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
TRIM48-201ENST00000417545 HERC2O95714 4834 aa5.1□□□□□ -1.59
TRIM48-201ENST00000417545 A0A1B0GX51 115 aa5.1□□□□□ -1.59
TRIM48-201ENST00000417545 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
TRIM48-201ENST00000417545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.1□□□□□ -1.59
TRIM48-201ENST00000417545 Q6ZQY7 126 aa5.1□□□□□ -1.59
TRIM48-201ENST00000417545 ST20-AS1Q8NBB2 130 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms