RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PRO1933Q9H354 126 aa7.76□□□□□ -1.17
LINC00339-202ENST00000416769 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
LINC00339-202ENST00000416769 VPREB1P12018 145 aa7.75□□□□□ -1.17
LINC00339-202ENST00000416769 TAL2Q16559 108 aa7.75□□□□□ -1.17
LINC00339-202ENST00000416769 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
LINC00339-202ENST00000416769 HIST1H4GQ99525 98 aa7.75□□□□□ -1.17
LINC00339-202ENST00000416769 TSTD3H0UI37 97 aa7.73□□□□□ -1.17
LINC00339-202ENST00000416769 H0Y9J4 135 aa7.73□□□□□ -1.17
LINC00339-202ENST00000416769 LBHQ53QV2 105 aaPredicted RBP7.73□□□□□ -1.17
LINC00339-202ENST00000416769 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
LINC00339-202ENST00000416769 Q8NDZ9 215 aa7.73□□□□□ -1.17
LINC00339-202ENST00000416769 TRBV10-2A0A0K0K1G8 114 aa7.72□□□□□ -1.17
LINC00339-202ENST00000416769 M0QXV9 152 aa7.72□□□□□ -1.17
LINC00339-202ENST00000416769 M0R378 163 aa7.72□□□□□ -1.17
LINC00339-202ENST00000416769 PRR4Q16378 134 aa7.72□□□□□ -1.17
LINC00339-202ENST00000416769 MRPL55Q7Z7F7 128 aaKnown RBP7.72□□□□□ -1.17
LINC00339-202ENST00000416769 DIRC1Q969H9 104 aa7.72□□□□□ -1.17
LINC00339-202ENST00000416769 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
LINC00339-202ENST00000416769 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
LINC00339-202ENST00000416769 CEND1Q8N111 149 aa7.7□□□□□ -1.18
LINC00339-202ENST00000416769 A4D1N5 150 aa7.69□□□□□ -1.18
LINC00339-202ENST00000416769 HSD52Q0P140 79 aa7.69□□□□□ -1.18
LINC00339-202ENST00000416769 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
LINC00339-202ENST00000416769 IGKV2-28A0A075B6P5 120 aa7.68□□□□□ -1.18
LINC00339-202ENST00000416769 NCR3O14931 201 aa7.68□□□□□ -1.18
LINC00339-202ENST00000416769 IGKV2D-28P01615 120 aa7.68□□□□□ -1.18
LINC00339-202ENST00000416769 UBE2BP63146 152 aa7.67□□□□□ -1.18
LINC00339-202ENST00000416769 GAGE10A6NGK3 116 aa7.66□□□□□ -1.18
LINC00339-202ENST00000416769 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
LINC00339-202ENST00000416769 TSPAN13O95857 204 aa7.66□□□□□ -1.18
LINC00339-202ENST00000416769 S100A7L2Q5SY68 101 aa7.66□□□□□ -1.18
LINC00339-202ENST00000416769 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
LINC00339-202ENST00000416769 TRAV13-2A0A0B4J235 113 aa7.65□□□□□ -1.18
LINC00339-202ENST00000416769 IGLV6-57P01721 117 aa7.65□□□□□ -1.18
LINC00339-202ENST00000416769 DDTP30046 118 aa7.65□□□□□ -1.18
LINC00339-202ENST00000416769 CTAG1AP78358 180 aa7.65□□□□□ -1.18
LINC00339-202ENST00000416769 LINC00337Q8N6G1 96 aa7.65□□□□□ -1.18
LINC00339-202ENST00000416769 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
LINC00339-202ENST00000416769 CFC1BP0CG36 223 aa7.64□□□□□ -1.19
LINC00339-202ENST00000416769 CFC1P0CG37 223 aa7.64□□□□□ -1.19
LINC00339-202ENST00000416769 OR13C6PQ8NH95 151 aa7.64□□□□□ -1.19
LINC00339-202ENST00000416769 KCNQ1DNQ9H478 68 aa7.64□□□□□ -1.19
LINC00339-202ENST00000416769 CBY1Q9Y3M2 126 aa7.64□□□□□ -1.19
LINC00339-202ENST00000416769 FXYD2P54710 66 aa7.63□□□□□ -1.19
LINC00339-202ENST00000416769 A6NDN8 102 aa7.62□□□□□ -1.19
LINC00339-202ENST00000416769 PRYO14603 147 aa7.62□□□□□ -1.19
LINC00339-202ENST00000416769 BVES-AS1Q5T3Y7 98 aa7.62□□□□□ -1.19
LINC00339-202ENST00000416769 XP32Q5T750 250 aa7.62□□□□□ -1.19
LINC00339-202ENST00000416769 A0A087X002 238 aa7.61□□□□□ -1.19
LINC00339-202ENST00000416769 A0A0B4J2C4 111 aa7.61□□□□□ -1.19
LINC00339-202ENST00000416769 M0R143 59 aa7.61□□□□□ -1.19
LINC00339-202ENST00000416769 SPRR1AP35321 89 aa7.6□□□□□ -1.19
LINC00339-202ENST00000416769 RAB37Q96AX2 223 aa7.6□□□□□ -1.19
LINC00339-202ENST00000416769 TRAV23DV6A0A075B6W5 121 aa7.59□□□□□ -1.19
LINC00339-202ENST00000416769 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
LINC00339-202ENST00000416769 A0A1B0GWB2 263 aa7.59□□□□□ -1.19
LINC00339-202ENST00000416769 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.19
LINC00339-202ENST00000416769 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
LINC00339-202ENST00000416769 BCE1O60756 84 aa7.58□□□□□ -1.2
LINC00339-202ENST00000416769 RETNLBQ9BQ08 111 aa7.58□□□□□ -1.2
LINC00339-202ENST00000416769 NHP2Q9NX24 153 aaKnown RBP7.58□□□□□ -1.2
LINC00339-202ENST00000416769 PRO1854Q9UHT4 67 aa7.58□□□□□ -1.2
LINC00339-202ENST00000416769 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
LINC00339-202ENST00000416769 ZNF73O43830 326 aaPredicted RBP7.57□□□□□ -1.2
LINC00339-202ENST00000416769 ZNF861PO60384 105 aa7.57□□□□□ -1.2
LINC00339-202ENST00000416769 RPL13AP40429 203 aaKnown RBP7.57□□□□□ -1.2
LINC00339-202ENST00000416769 CDIP1Q9H305 208 aa7.57□□□□□ -1.2
LINC00339-202ENST00000416769 MUC17Q685J3 4493 aa7.57□□□□□ -1.2
LINC00339-202ENST00000416769 SMIM11BQ8TCY0 68 aa7.56□□□□□ -1.2
LINC00339-202ENST00000416769 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
LINC00339-202ENST00000416769 RPL28P46779 137 aaKnown RBP7.55□□□□□ -1.2
LINC00339-202ENST00000416769 FAM19A1Q7Z5A9 133 aa7.55□□□□□ -1.2
LINC00339-202ENST00000416769 TRBV7-6A0A0J9YX20 115 aa7.54□□□□□ -1.2
LINC00339-202ENST00000416769 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
LINC00339-202ENST00000416769 B5MCH6 92 aa7.53□□□□□ -1.2
LINC00339-202ENST00000416769 UBE2AP49459 152 aa7.53□□□□□ -1.2
LINC00339-202ENST00000416769 C6orf99Q4VX62 202 aa7.53□□□□□ -1.2
LINC00339-202ENST00000416769 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
LINC00339-202ENST00000416769 PCP4L1A6NKN8 68 aa7.52□□□□□ -1.21
LINC00339-202ENST00000416769 H7C2G1 150 aa7.52□□□□□ -1.21
LINC00339-202ENST00000416769 K7ERJ3 54 aa7.52□□□□□ -1.21
LINC00339-202ENST00000416769 VAMP3Q15836 100 aa7.52□□□□□ -1.21
LINC00339-202ENST00000416769 KRTAP13-2Q52LG2 175 aa7.52□□□□□ -1.21
LINC00339-202ENST00000416769 COX7BP24311 80 aa7.51□□□□□ -1.21
LINC00339-202ENST00000416769 BATFQ16520 125 aa7.51□□□□□ -1.21
LINC00339-202ENST00000416769 Q1RN00 199 aa7.51□□□□□ -1.21
LINC00339-202ENST00000416769 Q6ZRX8 168 aa7.51□□□□□ -1.21
LINC00339-202ENST00000416769 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
LINC00339-202ENST00000416769 PRLHP81277 87 aa7.5□□□□□ -1.21
LINC00339-202ENST00000416769 TYMSOSQ8TAI1 123 aa7.5□□□□□ -1.21
LINC00339-202ENST00000416769 SNHG12Q9BXW3 62 aa7.49□□□□□ -1.21
LINC00339-202ENST00000416769 H0YGX0 51 aa7.48□□□□□ -1.21
LINC00339-202ENST00000416769 DHRS4-AS1Q9P1J3 65 aa7.48□□□□□ -1.21
LINC00339-202ENST00000416769 CRYGAP11844 174 aa7.47□□□□□ -1.21
LINC00339-202ENST00000416769 SMCR5Q8TEV8 140 aa7.47□□□□□ -1.21
LINC00339-202ENST00000416769 Q9BRP9 147 aa7.47□□□□□ -1.21
LINC00339-202ENST00000416769 COX6CP09669 75 aa7.46□□□□□ -1.22
LINC00339-202ENST00000416769 PSMB2P49721 201 aa7.46□□□□□ -1.22
LINC00339-202ENST00000416769 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
LINC00339-202ENST00000416769 TRIAP1O43715 76 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms