RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 A0A1B0GU69 56 aa7.06□□□□□ -1.28
COL12A1-203ENST00000416123 TP53AIP1Q9HCN2 124 aa7.06□□□□□ -1.28
COL12A1-203ENST00000416123 LAMA1P25391 3075 aa7.06□□□□□ -1.28
COL12A1-203ENST00000416123 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
COL12A1-203ENST00000416123 C19orf73Q9NVV2 129 aa7.05□□□□□ -1.28
COL12A1-203ENST00000416123 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
COL12A1-203ENST00000416123 GIG44P09565 113 aaPredicted RBP7.05□□□□□ -1.28
COL12A1-203ENST00000416123 TRANK1O15050 2925 aa7.05□□□□□ -1.28
COL12A1-203ENST00000416123 VCANP13611 3396 aa7.04□□□□□ -1.28
COL12A1-203ENST00000416123 C15orf56Q8N910 161 aa7.04□□□□□ -1.28
COL12A1-203ENST00000416123 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
COL12A1-203ENST00000416123 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
COL12A1-203ENST00000416123 A0A1W2PNN7 141 aa7.04□□□□□ -1.28
COL12A1-203ENST00000416123 ATP11AUNQ6ZP68 121 aa7.04□□□□□ -1.28
COL12A1-203ENST00000416123 KRTAP1-3Q8IUG1 177 aa7.04□□□□□ -1.28
COL12A1-203ENST00000416123 TM2D3Q9BRN9 247 aa7.03□□□□□ -1.28
COL12A1-203ENST00000416123 LITAFQ99732 161 aa7.03□□□□□ -1.28
COL12A1-203ENST00000416123 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
COL12A1-203ENST00000416123 HECTD1Q9ULT8 2610 aa7.03□□□□□ -1.28
COL12A1-203ENST00000416123 IGLV1-50A0A075B6I6 118 aa7.02□□□□□ -1.29
COL12A1-203ENST00000416123 KLK9Q2XQG4 91 aa7.02□□□□□ -1.29
COL12A1-203ENST00000416123 ITPR3Q14573 2671 aa7.02□□□□□ -1.29
COL12A1-203ENST00000416123 COL6A3P12111 3177 aa7.02□□□□□ -1.29
COL12A1-203ENST00000416123 CFAP46Q8IYW2 2715 aa7.02□□□□□ -1.29
COL12A1-203ENST00000416123 PRO0461Q9UI25 63 aa7.02□□□□□ -1.29
COL12A1-203ENST00000416123 FLNAP21333 2647 aaKnown RBP7.02□□□□□ -1.29
COL12A1-203ENST00000416123 K7EQZ3 153 aa7.01□□□□□ -1.29
COL12A1-203ENST00000416123 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
COL12A1-203ENST00000416123 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
COL12A1-203ENST00000416123 DSCR10P59022 87 aa7□□□□□ -1.29
COL12A1-203ENST00000416123 TRAV22A0A0B4J277 110 aa7□□□□□ -1.29
COL12A1-203ENST00000416123 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
COL12A1-203ENST00000416123 A0A087WTM6 91 aa7□□□□□ -1.29
COL12A1-203ENST00000416123 CASC10Q5T4H9 136 aa6.99□□□□□ -1.29
COL12A1-203ENST00000416123 FREM2Q5SZK8 3169 aa6.98□□□□□ -1.29
COL12A1-203ENST00000416123 OBSCN-AS1Q96MR7 158 aa6.98□□□□□ -1.29
COL12A1-203ENST00000416123 REV3LO60673 3130 aa6.97□□□□□ -1.29
COL12A1-203ENST00000416123 A8MWP4 228 aa6.97□□□□□ -1.29
COL12A1-203ENST00000416123 IGFL1Q6UW32 110 aa6.97□□□□□ -1.29
COL12A1-203ENST00000416123 SPTBN5Q9NRC6 3674 aaKnown RBP6.96□□□□□ -1.29
COL12A1-203ENST00000416123 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.29
COL12A1-203ENST00000416123 KCNQ1DNQ9H478 68 aa6.96□□□□□ -1.29
COL12A1-203ENST00000416123 FLNBO75369 2602 aaKnown RBP6.96□□□□□ -1.29
COL12A1-203ENST00000416123 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
COL12A1-203ENST00000416123 PRR34Q9NV39 138 aa6.95□□□□□ -1.3
COL12A1-203ENST00000416123 KRTAP1-1Q07627 177 aa6.95□□□□□ -1.3
COL12A1-203ENST00000416123 ZNF861PO60384 105 aa6.95□□□□□ -1.3
COL12A1-203ENST00000416123 A0A1B0GW54 56 aa6.94□□□□□ -1.3
COL12A1-203ENST00000416123 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
COL12A1-203ENST00000416123 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
COL12A1-203ENST00000416123 MGAM2Q2M2H8 2515 aa6.93□□□□□ -1.3
COL12A1-203ENST00000416123 Q8N377 158 aa6.93□□□□□ -1.3
COL12A1-203ENST00000416123 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
COL12A1-203ENST00000416123 C8orf87E5RJ46 101 aa6.92□□□□□ -1.3
COL12A1-203ENST00000416123 CENPEQ02224 2701 aa6.92□□□□□ -1.3
COL12A1-203ENST00000416123 HELZ2Q9BYK8 2649 aaKnown RBP6.92□□□□□ -1.3
COL12A1-203ENST00000416123 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
COL12A1-203ENST00000416123 PSORS1C2Q9UIG4 136 aa6.91□□□□□ -1.3
COL12A1-203ENST00000416123 AKAP13Q12802 2813 aa6.9□□□□□ -1.3
COL12A1-203ENST00000416123 USP34Q70CQ2 3546 aa6.9□□□□□ -1.31
COL12A1-203ENST00000416123 CRIPTQ9P021 101 aa6.9□□□□□ -1.31
COL12A1-203ENST00000416123 EYSQ5T1H1 3165 aa6.89□□□□□ -1.31
COL12A1-203ENST00000416123 SSBP3-AS1Q7Z2R9 100 aa6.89□□□□□ -1.31
COL12A1-203ENST00000416123 C9orf163Q8N9P6 203 aa6.88□□□□□ -1.31
COL12A1-203ENST00000416123 IGLV7-43P04211 117 aa6.88□□□□□ -1.31
COL12A1-203ENST00000416123 FRYQ5TBA9 3013 aa6.88□□□□□ -1.31
COL12A1-203ENST00000416123 FLG2Q5D862 2391 aaPredicted RBP6.88□□□□□ -1.31
COL12A1-203ENST00000416123 ERC2-IT1O76042 136 aa6.88□□□□□ -1.31
COL12A1-203ENST00000416123 LINC00612Q8N6U2 182 aa6.88□□□□□ -1.31
COL12A1-203ENST00000416123 SPEGQ15772 3267 aa6.87□□□□□ -1.31
COL12A1-203ENST00000416123 H3BPC8 53 aa6.87□□□□□ -1.31
COL12A1-203ENST00000416123 ATRQ13535 2644 aa6.86□□□□□ -1.31
COL12A1-203ENST00000416123 C8orf17Q9NRJ1 99 aa6.86□□□□□ -1.31
COL12A1-203ENST00000416123 LOC101927531A0A1B0GV80 90 aa6.86□□□□□ -1.31
COL12A1-203ENST00000416123 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
COL12A1-203ENST00000416123 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
COL12A1-203ENST00000416123 TLX1NBP0CAT3 122 aa6.84□□□□□ -1.31
COL12A1-203ENST00000416123 COA5Q86WW8 74 aa6.84□□□□□ -1.31
COL12A1-203ENST00000416123 MYO15AQ9UKN7 3530 aa6.84□□□□□ -1.32
COL12A1-203ENST00000416123 TNP2Q05952 138 aa6.84□□□□□ -1.32
COL12A1-203ENST00000416123 ZNF575Q86XF7 245 aa6.84□□□□□ -1.32
COL12A1-203ENST00000416123 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
COL12A1-203ENST00000416123 PLA2G2DQ9UNK4 145 aa6.83□□□□□ -1.32
COL12A1-203ENST00000416123 CHD6Q8TD26 2715 aa6.82□□□□□ -1.32
COL12A1-203ENST00000416123 LINC00336Q6ZUF6 198 aa6.82□□□□□ -1.32
COL12A1-203ENST00000416123 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
COL12A1-203ENST00000416123 LINC01600Q96MT4 127 aa6.81□□□□□ -1.32
COL12A1-203ENST00000416123 MAST4O15021 2626 aa6.8□□□□□ -1.32
COL12A1-203ENST00000416123 SPRR4Q96PI1 79 aa6.8□□□□□ -1.32
COL12A1-203ENST00000416123 TEX15Q9BXT5 2789 aa6.8□□□□□ -1.32
COL12A1-203ENST00000416123 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
COL12A1-203ENST00000416123 CNBPP62633 177 aaKnown RBP6.79□□□□□ -1.32
COL12A1-203ENST00000416123 LINC00483Q53H64 154 aa6.79□□□□□ -1.32
COL12A1-203ENST00000416123 MAP1AP78559 2803 aaPredicted RBP6.79□□□□□ -1.32
COL12A1-203ENST00000416123 FRYLO94915 3013 aa6.78□□□□□ -1.32
COL12A1-203ENST00000416123 DSPP15924 2871 aaKnown RBP6.78□□□□□ -1.32
COL12A1-203ENST00000416123 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
COL12A1-203ENST00000416123 BOD1L1Q8NFC6 3051 aa6.77□□□□□ -1.33
COL12A1-203ENST00000416123 Q8N1X5 172 aa6.76□□□□□ -1.33
COL12A1-203ENST00000416123 A8MUN3 132 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms