RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 PRADC1Q9BSG0 188 aa3.68□□□□□ -1.82
EPHA4-204ENST00000415749 CYSLTR1Q9Y271 337 aa3.68□□□□□ -1.82
EPHA4-204ENST00000415749 DNAH8Q96JB1 4490 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 TRAV12-2A0A075B6T6 113 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 A6NED7 52 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 A8MWP4 228 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 H3BNG1 76 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 UBE2D1P51668 147 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 CRYBA4P53673 196 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 TSPEAR-AS2P59090 65 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 RPL39P62891 51 aaKnown RBP3.67□□□□□ -1.82
EPHA4-204ENST00000415749 ADM2Q7Z4H4 148 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 RAB37Q96AX2 223 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 PLEKHB2Q96CS7 222 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 NAA38Q9BRA0 125 aaKnown RBP3.67□□□□□ -1.82
EPHA4-204ENST00000415749 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 SPCS1Q9Y6A9 102 aa3.67□□□□□ -1.82
EPHA4-204ENST00000415749 A0A1B0GV72 72 aa3.66□□□□□ -1.82
EPHA4-204ENST00000415749 FABP2P12104 132 aa3.66□□□□□ -1.82
EPHA4-204ENST00000415749 HTN1P15515 57 aa3.66□□□□□ -1.82
EPHA4-204ENST00000415749 NOP10Q9NPE3 64 aaKnown RBP3.66□□□□□ -1.82
EPHA4-204ENST00000415749 NHP2Q9NX24 153 aaKnown RBP3.66□□□□□ -1.82
EPHA4-204ENST00000415749 LRP2P98164 4655 aa3.65□□□□□ -1.82
EPHA4-204ENST00000415749 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.82
EPHA4-204ENST00000415749 A0A096LPF7 62 aa3.65□□□□□ -1.83
EPHA4-204ENST00000415749 I3L3M4 83 aa3.65□□□□□ -1.83
EPHA4-204ENST00000415749 IGHV3-30P01768 117 aa3.65□□□□□ -1.83
EPHA4-204ENST00000415749 IGHV3-30-5P0DP03 117 aa3.65□□□□□ -1.83
EPHA4-204ENST00000415749 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
EPHA4-204ENST00000415749 LINC00483Q53H64 154 aa3.65□□□□□ -1.83
EPHA4-204ENST00000415749 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
EPHA4-204ENST00000415749 ICOSQ9Y6W8 199 aa3.65□□□□□ -1.83
EPHA4-204ENST00000415749 LRCOL1A6NCL2 159 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 ZNF815PA8K554 130 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 K7ERU9 68 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 COX7A2LO14548 114 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 LEPROTO15243 131 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 ZNF22P17026 224 aaPredicted RBP3.64□□□□□ -1.83
EPHA4-204ENST00000415749 UBE2D3P61077 147 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 UBE2D2P62837 147 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 ZNF56Q15929 161 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 FAM74A4Q5TZK3 123 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 RMI2Q96E14 147 aa3.64□□□□□ -1.83
EPHA4-204ENST00000415749 A8MWV9 139 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 F8W1H4 67 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 J3QQQ9 107 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 M0R2P5 195 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 PSCAO43653 123 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 IGHV3-53P01767 116 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 MT1HL1P0DM35 61 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 MRPS36P82909 103 aaKnown RBP3.63□□□□□ -1.83
EPHA4-204ENST00000415749 CFAP126Q5VTH2 177 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 Q6ZSA8 131 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 DNAJC30Q96LL9 226 aa3.63□□□□□ -1.83
EPHA4-204ENST00000415749 LST1O00453 97 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 WFDC2Q14508 124 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 LYPD5Q6UWN5 251 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 SCXQ7RTU7 201 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 C10orf126Q8N4M7 172 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 Q8N814 137 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 OR13C6PQ8NH95 151 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 LINC01600Q96MT4 127 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 UBE2D4Q9Y2X8 147 aa3.62□□□□□ -1.83
EPHA4-204ENST00000415749 A0A0B4J2C4 111 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 IGLV7-43P04211 117 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 TMEM170BQ5T4T1 132 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 ST20-AS1Q8NBB2 130 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 TMEM263Q8WUH6 116 aaKnown RBP3.61□□□□□ -1.83
EPHA4-204ENST00000415749 UBE2WQ96B02 151 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 SPANXA1Q9NS26 97 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 ANAPC11Q9NYG5 84 aa3.61□□□□□ -1.83
EPHA4-204ENST00000415749 IGHV1-58A0A0C4DH39 117 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 A8MUN3 132 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 A8MUU9 505 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 H3BMG7 143 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 IGHV3-30-3P0DP02 117 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 ATP6V0E2Q8NHE4 81 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 VPS25Q9BRG1 176 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 SPANXDQ9BXN6 97 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 SPANXCQ9NY87 97 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 SS18L2Q9UHA2 77 aa3.6□□□□□ -1.83
EPHA4-204ENST00000415749 TRGV2A0A075B6R0 118 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 IGHV3-73A0A0B4J1V6 119 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 LECT2O14960 151 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 TCL1BO95988 128 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 IGHV3-33P01772 117 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 LGALS3P17931 250 aaKnown RBP3.59□□□□□ -1.83
EPHA4-204ENST00000415749 Q6ZTI0 123 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 Q6ZUT4 128 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 MUSTN1Q8IVN3 82 aa3.59□□□□□ -1.83
EPHA4-204ENST00000415749 MRPL16Q9NX20 251 aaKnown RBP3.59□□□□□ -1.83
EPHA4-204ENST00000415749 TNXBP22105 4242 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 TRBV20-1A0A075B6N2 111 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 TRBV10-1A0A0K0K1A3 114 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 SLC25A20O43772 301 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 TIMM17BO60830 172 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 LINC00694P0DN24 101 aa3.58□□□□□ -1.84
EPHA4-204ENST00000415749 RPL37AP61513 92 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms